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The map label for this gene is recR

Identifier: 45659291

GI number: 45659291

Start: 4250006

End: 4250611

Strand: Direct

Name: recR

Synonym: LIC13476

Alternate gene names: 45659291

Gene position: 4250006-4250611 (Clockwise)

Preceding gene: 45659290

Following gene: 45659297

Centisome position: 99.36

GC content: 36.3

Gene sequence:

>606_bases
TTGGCGGAAAATTTGGCTAATCATCTTCTTGATGAAATGATAGAAGCTCTTTCTTCTCTTCCAGGAATTGGAAGAAAAAG
CGCTTTTAGAATTAGTTTTCATCTTTTAAGATTAGAACAAGGTCTTTTTAACCAATTCATTCATCAACTTACAGATACAA
AAAATAAAATCAAATTTTGCAAACGTTGCGGCTCTTATGCAGAAACTGAAATTTGCGAGATCTGTGTTTCCGAAAAAAGA
GATTCTCATACTTTTTGCGTAGTAGAGCAACCGGAAGACATTTTTTTTATTGAAAACACAAGAGAATTTCAGGGCAAATA
CCACGTGTTAAACGGAGTCATTTCTCCCTTAGAAGGGATCGGTCCCAGAGATCTTAGAATCAAAGAACTTTTGGAAAGAA
TAGAACCAGAACAAGTAAAAGAAGTTTTGATCGCTACTAACCCGACCTTAGAAGGAGACGCAACAGCCGATTATTTAGCA
AATCAATTAAAACCTATTTCGGTTAATGTAACTAGAATCGCTTATGGGATTACGGTCGGTGGTTCGATCGAGCTTGCTGA
TCAATATACTTTAGGAAGAGCAATTCGTTCTCGTCTTCAACTTTAG

Upstream 100 bases:

>100_bases
GCTGCAACAAACGACGCTCTCAAAAAAGCAAAAGAAGCTACCGCATACGAATTTCAATCAGCATCTGGTGGTTTGGATTT
CTCAGAAATTTCCAAAATGT

Downstream 100 bases:

>100_bases
AATGGATTTGAAAGTTTAATTTCTCATTCATTTTAAAAATGTAGGAGCTTTTACTTTTGAAAACTTTTACATCTTTGGTA
AAAATCGGCCGTTAATTTTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFCKRCGSYAETEICEICVSEKR
DSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLA
NQLKPISVNVTRIAYGITVGGSIELADQYTLGRAIRSRLQL

Sequences:

>Translated_201_residues
MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFCKRCGSYAETEICEICVSEKR
DSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLA
NQLKPISVNVTRIAYGITVGGSIELADQYTLGRAIRSRLQL
>Mature_200_residues
AENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFCKRCGSYAETEICEICVSEKRD
SHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLAN
QLKPISVNVTRIAYGITVGGSIELADQYTLGRAIRSRLQL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=191, Percent_Identity=42.4083769633508, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_LEPIC (Q72LS5)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_003377.1
- ProteinModelPortal:   Q72LS5
- SMR:   Q72LS5
- GeneID:   2771075
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC13476
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   LINT267671:LIC_13476-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22706; Mature: 22575

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFC
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGI
HHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCC
GPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVG
CCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEHEEEEEEEC
GSIELADQYTLGRAIRSRLQL
CEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFC
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGI
HHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCC
GPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVG
CCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEHEEEEEEEC
GSIELADQYTLGRAIRSRLQL
CEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA