| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is petH [H]
Identifier: 45659286
GI number: 45659286
Start: 4245217
End: 4246161
Strand: Direct
Name: petH [H]
Synonym: LIC13470
Alternate gene names: 45659286
Gene position: 4245217-4246161 (Clockwise)
Preceding gene: 45659283
Following gene: 45659287
Centisome position: 99.25
GC content: 36.72
Gene sequence:
>945_bases TTGCATTCGCTCATGAAACCGACTAGAGAACCTCAAATCAATTTATTCAAAAAATCCAACCCTTACAAAGCAAAAGTAAT CAGCAATGTTCTATTGACTCCGGAAACCGGAACCGGAAAAAGACCCAAAAAAGAAGGAGAAGCGCTCGTTCATAGAATTG TACTTGCAATTGATCACTCTGCTTATCCATACGTAATCGGACAAAGTGGAGGAGTTATACCTCCCGGAGAAGATCCCGAA AAAAAAGCAAAAGGTTTAGCAGATGTTGGATATACCGTAAGACTTTATTCCATTGCTTCTCCAAGTTATTCTTTCGGAAT GAAAGAGGACAATATAGAATTCATTATTAAAAGAGACAACATATATGATGAAAATGGAAACATTCAATTCAAAGGTGTTT GTTCCAATTATATGTGCGACCTGAAACCAGGTGATGAAGTAACCATGACTGGGCCTTCTGGAAAAAAATTTCTTCTTCCT AATACAGATTTCAGTGGAGATATTATGTTTCTTGCAACTGGAACTGGGATCGCTCCTTTTATCGGAATGAGTGAAGAACT TTTAGAACACAAACTCATCAAATTTACTGGGAACATCACTCTCGTTTATGGAGCACCTTATTCTGATGAACTAGTAATGA TGGACTATCTGAAAGGTTTAGAATCTAAACATAAAAATTTCAAATTAGTAACCGCAATCTCGAGAGAAGAAAAAAATTCT TTCGATGGCGGAAGAATGTACATTTCTCACAGAGTCCGTGAACAAGCCGAAGCAGTAAAAAAGATTTTAAATGGAGGCGG ACGGTTTTATATCTGTGGTGGACCTAAGGGAATGGAGAAAGGTGTAATTGAAGAAATTCAAAAAATTTCAGGAAACACGG GAACTTATGAAGAATTCAAACATCATTTAGAAGGAGCCCATCAATTATTTGTGGAAACATATTGA
Upstream 100 bases:
>100_bases ACTACAACTTTACCGTAAATACACTCTAAATATCCCGTTTGACGAAATGCTCTCTTCGAAAACTATGTAGGAAATTTGGA AAATTTTTCATTTTTAGGAA
Downstream 100 bases:
>100_bases AATTTATTAATTTCCTTATACACCAAAAACCGAAGGAGACTTATAACCTTCGGTTTTTTATTTTAACGTGAATACGGAAA AATTGATTCCTCTACAAACT
Product: ferredoxin--NADP reductase
Products: NA
Alternate protein names: FNR [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MHSLMKPTREPQINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE KKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLP NTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLVTAISREEKNS FDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHLEGAHQLFVETY
Sequences:
>Translated_314_residues MHSLMKPTREPQINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE KKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLP NTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLVTAISREEKNS FDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHLEGAHQLFVETY >Mature_314_residues MHSLMKPTREPQINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE KKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLP NTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLVTAISREEKNS FDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHLEGAHQLFVETY
Specific function: Essential for growth [H]
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR012146 - InterPro: IPR015701 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR008213 - InterPro: IPR017938 [H]
Pfam domain/function: PF01383 CpcD; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 34905; Mature: 34905
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLMKPTREPQINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHS CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCC AYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDN CCCEEECCCCCCCCCCCCHHHHHCCHHHCCEEEEEEEECCCCCCCCCCCCCEEEEEEECC IYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPF EECCCCCEEEEEECCCCEECCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCHH IGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLVTAISREEKNS CCCHHHHHHHHHEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC FDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFK CCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH HHLEGAHQLFVETY HHHHHHHHEEEECC >Mature Secondary Structure MHSLMKPTREPQINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHS CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCC AYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDN CCCEEECCCCCCCCCCCCHHHHHCCHHHCCEEEEEEEECCCCCCCCCCCCCEEEEEEECC IYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPF EECCCCCEEEEEECCCCEECCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCHH IGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLVTAISREEKNS CCCHHHHHHHHHEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC FDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFK CCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH HHLEGAHQLFVETY HHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]