Click here to switch to the map view.

The map label for this gene is 45659274

Identifier: 45659274

GI number: 45659274

Start: 4234880

End: 4235515

Strand: Direct

Name: 45659274

Synonym: LIC13457

Alternate gene names: NA

Gene position: 4234880-4235515 (Clockwise)

Preceding gene: 45659270

Following gene: 45659275

Centisome position: 99.01

GC content: 32.7

Gene sequence:

>636_bases
TTGAGTTTCTTCCATCCAGGAATTTTTGAGGGCCATTTCATGAGTCAGATTACCGGTTTTTTTTCAGAGCTGAAAACGAG
TTTTGACAACCTATCTCAGTCTATCCAATCATTTCTGAATACAATTGAAGCGATTCGTTCTTTTTTAAAGATTCTTTTTT
CCATTATTCCTTTAGATCTTTTTTTAGTTTTAATTTTTTCTCTGGTTCTTGTGTATTTGTTCAACACGATCTCGCCCACT
ACGACCCGCCTCAACTATACTTTAGGCGTATTAATCATTTCTGTGCTTCGAGCATTTTTTCATCAAACTTTGTCACAGAC
TTGGAATTTAGGACCGGTTTCCCTGACAGCGATTTTTCTTTTGACTCCGGCTTATTTTGTTTCTTCATTACGTTTTGGAT
TTTATTTTTTAAAAAAAATTCAGAAACGAAAAAATGAACTCAATCCAAAAAATTTCGAAGCAGGGCTCAATAACATTCAA
AAATCATTTTATACTCTAATGGCAAAAAGTTATGAAGAACTTCGCTCCACAGATGGAAAATCTTCTTTGGACTTGAATGT
TTTAAAAGAACAAATTACGGAATTAGAAAGAACGATCCAAGGTTTAAAGAATTTTCTTGATTCTGAAAAAAAATAA

Upstream 100 bases:

>100_bases
ATGATTTTCATGTAAGACAAGAAAAGAAATTCCAATCACAGAATACGCCAGATAAAGTTTCCGTAAAAAGGAAAGTTGTT
GCACTTTCACAAGTAAAGAT

Downstream 100 bases:

>100_bases
TCTGGAGCTATTTCGATGATTACATTTTTACCTAACGATTATTAATACCCAGTAATTAAATTACGAAAATAAAATTCCGT
TTCAAAACCTAAAACAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSFFHPGIFEGHFMSQITGFFSELKTSFDNLSQSIQSFLNTIEAIRSFLKILFSIIPLDLFLVLIFSLVLVYLFNTISPT
TTRLNYTLGVLIISVLRAFFHQTLSQTWNLGPVSLTAIFLLTPAYFVSSLRFGFYFLKKIQKRKNELNPKNFEAGLNNIQ
KSFYTLMAKSYEELRSTDGKSSLDLNVLKEQITELERTIQGLKNFLDSEKK

Sequences:

>Translated_211_residues
MSFFHPGIFEGHFMSQITGFFSELKTSFDNLSQSIQSFLNTIEAIRSFLKILFSIIPLDLFLVLIFSLVLVYLFNTISPT
TTRLNYTLGVLIISVLRAFFHQTLSQTWNLGPVSLTAIFLLTPAYFVSSLRFGFYFLKKIQKRKNELNPKNFEAGLNNIQ
KSFYTLMAKSYEELRSTDGKSSLDLNVLKEQITELERTIQGLKNFLDSEKK
>Mature_210_residues
SFFHPGIFEGHFMSQITGFFSELKTSFDNLSQSIQSFLNTIEAIRSFLKILFSIIPLDLFLVLIFSLVLVYLFNTISPTT
TRLNYTLGVLIISVLRAFFHQTLSQTWNLGPVSLTAIFLLTPAYFVSSLRFGFYFLKKIQKRKNELNPKNFEAGLNNIQK
SFYTLMAKSYEELRSTDGKSSLDLNVLKEQITELERTIQGLKNFLDSEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24287; Mature: 24155

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFHPGIFEGHFMSQITGFFSELKTSFDNLSQSIQSFLNTIEAIRSFLKILFSIIPLDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLVLIFSLVLVYLFNTISPTTTRLNYTLGVLIISVLRAFFHQTLSQTWNLGPVSLTAIFL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LTPAYFVSSLRFGFYFLKKIQKRKNELNPKNFEAGLNNIQKSFYTLMAKSYEELRSTDGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSLDLNVLKEQITELERTIQGLKNFLDSEKK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFFHPGIFEGHFMSQITGFFSELKTSFDNLSQSIQSFLNTIEAIRSFLKILFSIIPLDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLVLIFSLVLVYLFNTISPTTTRLNYTLGVLIISVLRAFFHQTLSQTWNLGPVSLTAIFL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LTPAYFVSSLRFGFYFLKKIQKRKNELNPKNFEAGLNNIQKSFYTLMAKSYEELRSTDGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSLDLNVLKEQITELERTIQGLKNFLDSEKK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA