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The map label for this gene is yebA [C]

Identifier: 45659270

GI number: 45659270

Start: 4231045

End: 4232151

Strand: Direct

Name: yebA [C]

Synonym: LIC13453

Alternate gene names: 45659270

Gene position: 4231045-4232151 (Clockwise)

Preceding gene: 45659263

Following gene: 45659274

Centisome position: 98.92

GC content: 30.44

Gene sequence:

>1107_bases
TTGGACCATATAAATATTCTCAAAAGAACAATGGAAAAACACATTAAAATTTTTTATTTTATAACTTCTATTCTATTCTT
AAATTTTGAAACTATACTTCCTAAAGATGAAGAAGTTAAAATCAAAGAAACAAAAACTAAGAAAGAGGTTCATATAGTTC
TTAAAAAGAATGAAGAATCAAAAATCAAAAAAGAAACTCATTCCGATTCTAAAAAAGAATTAAAAGAAAAAAAGAAAAAA
CGAGTAAATCTTGAATTCGAAGTCATACGAAAAAAAGAGTCACTTTTCTCTTTTTCGATCCAAACCAGAAAATTTGCACA
AGGAGAATTGTTATTCCTGAAACTCACTCCGGAAAAAACAATTCTTTCTAAATTAGATAGAATCAAAATTTTTTGGGAAA
AAAAAGAAATTCCCTACACAAAAAAAGAATTAGTTTTTTATGCCTGGATTCCGATTTCACCAGAATTTAATAAGAAAAGT
GGAATATTAGAAATACATGATAAAAATCTTTTTAGAAAAAACGATTATAAAGAATACGAAATCCCCATCCATAAAACCAC
TTTTTCAGTCACAAAAGTTTCTTCTCTTATTATGGACAAAAAATATACGTCCCAAGAACTTCCTCAAGAAACCTTGGATT
TTATCGCAGACTGCTCTAAAGCAAAAGCAGAAGCATTTCGTTCTAAAACAGATTTACAAATCGCATCTGACTTTGTTTAT
CCAGTAACAGAAGTACAATTTACAAGTCCGTTTTATAAAAGACGGATTTATAACAAAACCAAAGGTAAACCGCACGGCGG
AGTTGATTTTAAAGGAGCACAAGGAACCCCCATTTATGCAATCAACGATGGAACAGTAGTTTTATCCAGATCTATGTATT
ATGAAGGAAATTTTACAGTGATAGATCATGGTTTGGAAGTTTATTCTTTATACATGCATCAATCCGAATTGAACGTGAAA
GTGGGCGATAAAATAAAAAAAGGAGATTTGATTGGCAAAGTAGGTTCTACCGGTATGTCAACCGGACCACATCTTCATTT
GGGTCTAAGAGTTCAAGGAACAATGGTAAATCCTCTTTCCGTTATTGGTCAAAAATTTTTTGAATAA

Upstream 100 bases:

>100_bases
TTTTAATCAGATAACATCGCCAAACAACAGTTAAGTTAAAAATTCAATCGGAAAATTTTTACTCTCAGATTTTATAAATA
TTTTTAAAAGAATTTTAAAT

Downstream 100 bases:

>100_bases
GAATTTTTAAATAATTATTATATAACAAATTGAAAATAGATTTTAATGAAAAGTCACAATTAGACACAAAACTTAAAACA
TTCTTCAATCGAAAAAGTTT

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MDHINILKRTMEKHIKIFYFITSILFLNFETILPKDEEVKIKETKTKKEVHIVLKKNEESKIKKETHSDSKKELKEKKKK
RVNLEFEVIRKKESLFSFSIQTRKFAQGELLFLKLTPEKTILSKLDRIKIFWEKKEIPYTKKELVFYAWIPISPEFNKKS
GILEIHDKNLFRKNDYKEYEIPIHKTTFSVTKVSSLIMDKKYTSQELPQETLDFIADCSKAKAEAFRSKTDLQIASDFVY
PVTEVQFTSPFYKRRIYNKTKGKPHGGVDFKGAQGTPIYAINDGTVVLSRSMYYEGNFTVIDHGLEVYSLYMHQSELNVK
VGDKIKKGDLIGKVGSTGMSTGPHLHLGLRVQGTMVNPLSVIGQKFFE

Sequences:

>Translated_368_residues
MDHINILKRTMEKHIKIFYFITSILFLNFETILPKDEEVKIKETKTKKEVHIVLKKNEESKIKKETHSDSKKELKEKKKK
RVNLEFEVIRKKESLFSFSIQTRKFAQGELLFLKLTPEKTILSKLDRIKIFWEKKEIPYTKKELVFYAWIPISPEFNKKS
GILEIHDKNLFRKNDYKEYEIPIHKTTFSVTKVSSLIMDKKYTSQELPQETLDFIADCSKAKAEAFRSKTDLQIASDFVY
PVTEVQFTSPFYKRRIYNKTKGKPHGGVDFKGAQGTPIYAINDGTVVLSRSMYYEGNFTVIDHGLEVYSLYMHQSELNVK
VGDKIKKGDLIGKVGSTGMSTGPHLHLGLRVQGTMVNPLSVIGQKFFE
>Mature_368_residues
MDHINILKRTMEKHIKIFYFITSILFLNFETILPKDEEVKIKETKTKKEVHIVLKKNEESKIKKETHSDSKKELKEKKKK
RVNLEFEVIRKKESLFSFSIQTRKFAQGELLFLKLTPEKTILSKLDRIKIFWEKKEIPYTKKELVFYAWIPISPEFNKKS
GILEIHDKNLFRKNDYKEYEIPIHKTTFSVTKVSSLIMDKKYTSQELPQETLDFIADCSKAKAEAFRSKTDLQIASDFVY
PVTEVQFTSPFYKRRIYNKTKGKPHGGVDFKGAQGTPIYAINDGTVVLSRSMYYEGNFTVIDHGLEVYSLYMHQSELNVK
VGDKIKKGDLIGKVGSTGMSTGPHLHLGLRVQGTMVNPLSVIGQKFFE

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=182, Percent_Identity=35.7142857142857, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 42740; Mature: 42740

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHINILKRTMEKHIKIFYFITSILFLNFETILPKDEEVKIKETKTKKEVHIVLKKNEES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCHH
KIKKETHSDSKKELKEKKKKRVNLEFEVIRKKESLFSFSIQTRKFAQGELLFLKLTPEKT
HHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHEEEEECCCCCCCCCEEEEEECCCHH
ILSKLDRIKIFWEKKEIPYTKKELVFYAWIPISPEFNKKSGILEIHDKNLFRKNDYKEYE
HHHHHHHEEEEEECCCCCCCHHCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEE
IPIHKTTFSVTKVSSLIMDKKYTSQELPQETLDFIADCSKAKAEAFRSKTDLQIASDFVY
EEEEEEEEHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
PVTEVQFTSPFYKRRIYNKTKGKPHGGVDFKGAQGTPIYAINDGTVVLSRSMYYEGNFTV
CCEEEEECCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECCCEEEEEEEEEECCCEEE
IDHGLEVYSLYMHQSELNVKVGDKIKKGDLIGKVGSTGMSTGPHLHLGLRVQGTMVNPLS
EECCCEEEEEEEECCCCCEEECCCEECCCEEECCCCCCCCCCCEEEEEEEEECEECCHHH
VIGQKFFE
HHHHHHCC
>Mature Secondary Structure
MDHINILKRTMEKHIKIFYFITSILFLNFETILPKDEEVKIKETKTKKEVHIVLKKNEES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCHH
KIKKETHSDSKKELKEKKKKRVNLEFEVIRKKESLFSFSIQTRKFAQGELLFLKLTPEKT
HHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHEEEEECCCCCCCCCEEEEEECCCHH
ILSKLDRIKIFWEKKEIPYTKKELVFYAWIPISPEFNKKSGILEIHDKNLFRKNDYKEYE
HHHHHHHEEEEEECCCCCCCHHCEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEE
IPIHKTTFSVTKVSSLIMDKKYTSQELPQETLDFIADCSKAKAEAFRSKTDLQIASDFVY
EEEEEEEEHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
PVTEVQFTSPFYKRRIYNKTKGKPHGGVDFKGAQGTPIYAINDGTVVLSRSMYYEGNFTV
CCEEEEECCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECCCEEEEEEEEEECCCEEE
IDHGLEVYSLYMHQSELNVKVGDKIKKGDLIGKVGSTGMSTGPHLHLGLRVQGTMVNPLS
EECCCEEEEEEEECCCCCEEECCCEECCCEEECCCCCCCCCCCEEEEEEEEECEECCHHH
VIGQKFFE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]