Click here to switch to the map view.

The map label for this gene is 45659263

Identifier: 45659263

GI number: 45659263

Start: 4223540

End: 4224046

Strand: Direct

Name: 45659263

Synonym: LIC13446

Alternate gene names: NA

Gene position: 4223540-4224046 (Clockwise)

Preceding gene: 45659262

Following gene: 45659270

Centisome position: 98.75

GC content: 30.77

Gene sequence:

>507_bases
ATGGGTAAACAAATTGCGGTCATTATGACCAAAATCGATGAAAGTTCATTTTTAGATTTCTTAAAATCGATTTCTGAAAT
TCAAATTCTTAAAGCGGACGCTTCGTCAGCTTCAAAAGATGCTTTCATGATCGATGATTTTTCGAAGGATCACGAAAACG
ACTTTATCTACTATATTTGGAACAAATCATTTCCTTGGAATTTTGAATTTTCTCAAACTAAAACAAATCGAACGAAACAA
AATTTTTATTATATAGAAAATATCTTTGAAGCCCCTTGTATCGAATACAGCCGTCATAATTTTAACGAGAAACAAAATTA
CGGAAGATTATATTGGAGTAAAAATTTTGCGGCGATAAATCCATTACAATACGATATAATGAAATTCGATAAATGGTATA
ACCAAATCATTCGGTGGGTTAAAAAAAATGGAAAACAAGAATACAAAGGAACACTAAACGCTTATTATCTTCCCGACGCT
TGGAAAGCATATGTAGAAAAAATTTAG

Upstream 100 bases:

>100_bases
TTTATAAAAAATTACAATTTTATAAAATACATGATTACTCTAAAATCGTAAATTAAAGATTTACACAAAAACTACAAAAC
AACTTTTATAAAATCTTCTT

Downstream 100 bases:

>100_bases
AAAACCTTTATAAAGTAAATTTTTAATCCAATAAAATTTTTTAAACTATGTTTTCTATAAAAATAAAATAACAAAAAATA
GCTTAAAAATAATATGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGKQIAVIMTKIDESSFLDFLKSISEIQILKADASSASKDAFMIDDFSKDHENDFIYYIWNKSFPWNFEFSQTKTNRTKQ
NFYYIENIFEAPCIEYSRHNFNEKQNYGRLYWSKNFAAINPLQYDIMKFDKWYNQIIRWVKKNGKQEYKGTLNAYYLPDA
WKAYVEKI

Sequences:

>Translated_168_residues
MGKQIAVIMTKIDESSFLDFLKSISEIQILKADASSASKDAFMIDDFSKDHENDFIYYIWNKSFPWNFEFSQTKTNRTKQ
NFYYIENIFEAPCIEYSRHNFNEKQNYGRLYWSKNFAAINPLQYDIMKFDKWYNQIIRWVKKNGKQEYKGTLNAYYLPDA
WKAYVEKI
>Mature_167_residues
GKQIAVIMTKIDESSFLDFLKSISEIQILKADASSASKDAFMIDDFSKDHENDFIYYIWNKSFPWNFEFSQTKTNRTKQN
FYYIENIFEAPCIEYSRHNFNEKQNYGRLYWSKNFAAINPLQYDIMKFDKWYNQIIRWVKKNGKQEYKGTLNAYYLPDAW
KAYVEKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20274; Mature: 20143

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKQIAVIMTKIDESSFLDFLKSISEIQILKADASSASKDAFMIDDFSKDHENDFIYYIW
CCCEEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEE
NKSFPWNFEFSQTKTNRTKQNFYYIENIFEAPCIEYSRHNFNEKQNYGRLYWSKNFAAIN
CCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCCCEEC
PLQYDIMKFDKWYNQIIRWVKKNGKQEYKGTLNAYYLPDAWKAYVEKI
CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCHHHHHHHHCC
>Mature Secondary Structure 
GKQIAVIMTKIDESSFLDFLKSISEIQILKADASSASKDAFMIDDFSKDHENDFIYYIW
CCEEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEE
NKSFPWNFEFSQTKTNRTKQNFYYIENIFEAPCIEYSRHNFNEKQNYGRLYWSKNFAAIN
CCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCCCEEC
PLQYDIMKFDKWYNQIIRWVKKNGKQEYKGTLNAYYLPDAWKAYVEKI
CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA