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The map label for this gene is 45659233

Identifier: 45659233

GI number: 45659233

Start: 4191341

End: 4192309

Strand: Direct

Name: 45659233

Synonym: LIC13416

Alternate gene names: NA

Gene position: 4191341-4192309 (Clockwise)

Preceding gene: 45659229

Following gene: 45659234

Centisome position: 97.99

GC content: 41.28

Gene sequence:

>969_bases
ATGGACACGCACGCAATTTTAGAAAATGTGCTAAACCCGCCAGTGTTGTTTTTCTTCCTTGGGATGGGAGTAGTCTTTTT
TAAATCGGATTTGGTTATTCCCGAATCCCTGTCTAAATTCTTTTCAATGTATCTACTTTTCGCCATTGGCTTTAAAGGAG
GACACGAGTTATCCAAAACCGCATTCAGTCAAGAGCACCTTTTTACTCTGATTGCATGTTCAATTATGGCAATTATAGTT
CCTATCTATGCCTATTTCGTTTTGAAAATTAAACTCGATAAACACAACGCCGCCGCCTTAGCAGGTTCCTTTGGTTCCAT
CAGCGCCGTCACATTTGTAACGGCAGGCGCTTTTTTACACAATTTGAAGGTAGAATACGGAGGGTTTATCGTCGCTGGAA
TGGCTCTGATGGAATCTCCTGCGATCGTAATCGCTGTAGTTTTAGACCGTTTAAATAAAAATAAAATGAACGGAGGCGGG
GCAATCAACTGGAAGGCTTTGTTACACGAAGCTCTTTTTGGTTCTTCAATTTATCTTCTAGTCGGGGCTCTGATCGTAGG
TTATATTACTGGAGATTCCGGTTGGAAAGCAGAGAAAGTTTTCGCGGATGATCTATTTAAGGGAATTCTTACATTCTTTC
TTTTGGATATGGGTATTTCAGCTGCTCGTAGATTTAAAGAACTCGCTAACGTTGGATTGTTCCTAATTATTGCGGCTATT
GCTTTGATGATCGTAAATGCAACACTAGGTTTAATTCTTACCAAAGTAATCGAGATGCCAGCGGGAGACGCTTTGATGTT
TGTCGTTCTATGCGCTTCTGCTTCTTATATAGCCGTACCTGCCGCTATGAAAGATATGATTCCGGAAGCAAACCCGAGTA
TCTATCTTACGGTTGCACTTTCGATCGTCTTTCCGATCAACATAGTCGCGGGAATTCCGCTCTATTACTATCTCGTGACT
TTAACTTAA

Upstream 100 bases:

>100_bases
ATTTCTTTTCCTTCCCTTTGTAAAATTACAGATTTTTCAAATCTCGATTTGTAAATTTCGATCGAAATTTGAAATTCTTA
AATCATGGAGTTAGCTGATT

Downstream 100 bases:

>100_bases
GGAAAAAGGTTTCATTTTCTCGACAATCGTTTTTACAACTCATTTCAAAACTCTAATTTTATTTTAGGATCAAATTTGAG
TTTCCTGAAAGATTGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; Conserved Domain Protein; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDTHAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSKTAFSQEHLFTLIACSIMAIIV
PIYAYFVLKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
AINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELANVGLFLIIAAI
ALMIVNATLGLILTKVIEMPAGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIVAGIPLYYYLVT
LT

Sequences:

>Translated_322_residues
MDTHAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSKTAFSQEHLFTLIACSIMAIIV
PIYAYFVLKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
AINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELANVGLFLIIAAI
ALMIVNATLGLILTKVIEMPAGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIVAGIPLYYYLVT
LT
>Mature_322_residues
MDTHAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSKTAFSQEHLFTLIACSIMAIIV
PIYAYFVLKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
AINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELANVGLFLIIAAI
ALMIVNATLGLILTKVIEMPAGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIVAGIPLYYYLVT
LT

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34685; Mature: 34685

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTHAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSKT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
AFSQEHLFTLIACSIMAIIVPIYAYFVLKIKLDKHNAAALAGSFGSISAVTFVTAGAFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH
NLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGGAINWKALLHEALFGSSIYLL
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELANVGLFLIIAAI
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ALMIVNATLGLILTKVIEMPAGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEHH
SIVFPINIVAGIPLYYYLVTLT
HHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MDTHAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSKT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
AFSQEHLFTLIACSIMAIIVPIYAYFVLKIKLDKHNAAALAGSFGSISAVTFVTAGAFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH
NLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGGAINWKALLHEALFGSSIYLL
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELANVGLFLIIAAI
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ALMIVNATLGLILTKVIEMPAGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEHH
SIVFPINIVAGIPLYYYLVTLT
HHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA