Click here to switch to the map view.

The map label for this gene is phoD

Identifier: 45659214

GI number: 45659214

Start: 4164603

End: 4165934

Strand: Direct

Name: phoD

Synonym: LIC13397

Alternate gene names: NA

Gene position: 4164603-4165934 (Clockwise)

Preceding gene: 45659213

Following gene: 45659215

Centisome position: 97.37

GC content: 32.28

Gene sequence:

>1332_bases
ATGAAATTCCAAATTTCAAAATATAAGACAATTTTTTATTTTTTCTCTCTATTCTTCAATTATATACTCAACGCAGAATC
AGCAAAAATCGTTTCGGGACCTATTTTAGGATATTCCACTTTAAAAGAAGTATTGGTTTGGGTTCAAACAGATCAAAAGT
CTAACGTTAAATTAGAATATTCTGAAATTGGAAATTCAAAAAATAAATTTTTTTCCGAAGAAATTCAAACAAAGTCAAAG
CAGGGTTTTATTGCAAAATTGATTGCAAATCAAGTTGAACCAGGTAAAAAATATAATTATAATATACTTATAGATGGAAA
AAAAATTCCAGCAAAACATTCGCAAGTATTTCAAACCCAACCTTTTTTCGCCTATGCCTCTAATGAAGACCCTCCCTCTT
TCTCCTTTGCCCTTGGAAGTTGTTCTTATATAAACGAACCAGAATTTGAGGTTCCAGGAAAAACTTATGGAGGAGAATAT
TTTATTTTTAATTCAATTCTTTCTAAAAAACCCAATTTTATGCTTTGGTTAGGGGACAACATTTATTTGAGAGAACCAGA
TTGGGATTCAAGAACTGGGTTTTTTCATCGTTACAGACAACAAAGGGGAATTCCAGAACTTGCCCCACTTTTTGCATCGG
TTCATCATTACGCAATTTGGGATGACCACGATTTTGGTCCAAACGATGCAGACTCTTCTTATTGGATGAGAGAAACTTCC
GAAGAAATGTTCAAACTCCACTGGGGAAATCCAAATTATGCAAAAGAAGGTATTTACGGTTCTTTTATATGGGGTGACGT
TCAATTTTTTCTTTTAGACAATAGGACATTTAGAACAGCTAACAACAATAAGATGATAAGCCCGAGACAAATTTTAGGTG
AAAAACAATTTCAGTGGCTCGTAAATTCACTGGCTTATTCAAAAGCTACTTTTAAGTTTATAGCTATGGGAGGACAATTT
TTAAATCCGAATCCAATTTTTGAAAATTACGCAACTTATCTAGAAGAAAAAAATAAAATACTTTCCGCAATTCAAGATTT
AAAAGTTAAAAATATAATTTTCTTAACGGGTGACCGCCATTTTACAGAATTGAATTTTCTAAAAGAAAAAGATATATCTA
TCTACGATCTTACAGTTTCTCCTCTAACATCCAAGCCTTATTCTCCAGATTCGGAAAAGAATCCTTTGCGTGTGGAAAAA
ACTCTCGTTGATAAAAGGAATTTCGGAACCATTTCCATAAGTGGAAAACGGAATGAAAGAAAACTAGTTCTACAGATTTT
TGACGTTTATGGAAAAGAACTTTGGAAAAAAGAAATCCTTTCAAATCCTTGA

Upstream 100 bases:

>100_bases
TTCTATGGAAAATATTTTAAAGAAAACCCAAGGCGCTTTTAATATACGTCCTTAGATTTTTGCAAATTTTACGATCTAAC
GAGCAGAAGGAGATTTATTT

Downstream 100 bases:

>100_bases
TTTAGTATGAAACGATCCATGAGCTTTATTATTACATTTTTATTATCTTTTATTTTTTTAATTTTATTTCTAATTTGGTG
GAATCAAGAAAGGCTGATTT

Product: alkaline phosphatase

Products: alcohol; phosphate

Alternate protein names: Phosphodiesterase/Alkaline Phosphatase D-Like Protein; Alkaline Phosphatase D; Phosphodiesterase I; Alkaline Phosphatase D-Related Protein; Alkaline Phosphatase D Domain-Containing Protein; Phosphodiesterase/Alkaline Phosphatase D-Like; Alkaline Phosphatase; Phosphodiesterase

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKFQISKYKTIFYFFSLFFNYILNAESAKIVSGPILGYSTLKEVLVWVQTDQKSNVKLEYSEIGNSKNKFFSEEIQTKSK
QGFIAKLIANQVEPGKKYNYNILIDGKKIPAKHSQVFQTQPFFAYASNEDPPSFSFALGSCSYINEPEFEVPGKTYGGEY
FIFNSILSKKPNFMLWLGDNIYLREPDWDSRTGFFHRYRQQRGIPELAPLFASVHHYAIWDDHDFGPNDADSSYWMRETS
EEMFKLHWGNPNYAKEGIYGSFIWGDVQFFLLDNRTFRTANNNKMISPRQILGEKQFQWLVNSLAYSKATFKFIAMGGQF
LNPNPIFENYATYLEEKNKILSAIQDLKVKNIIFLTGDRHFTELNFLKEKDISIYDLTVSPLTSKPYSPDSEKNPLRVEK
TLVDKRNFGTISISGKRNERKLVLQIFDVYGKELWKKEILSNP

Sequences:

>Translated_443_residues
MKFQISKYKTIFYFFSLFFNYILNAESAKIVSGPILGYSTLKEVLVWVQTDQKSNVKLEYSEIGNSKNKFFSEEIQTKSK
QGFIAKLIANQVEPGKKYNYNILIDGKKIPAKHSQVFQTQPFFAYASNEDPPSFSFALGSCSYINEPEFEVPGKTYGGEY
FIFNSILSKKPNFMLWLGDNIYLREPDWDSRTGFFHRYRQQRGIPELAPLFASVHHYAIWDDHDFGPNDADSSYWMRETS
EEMFKLHWGNPNYAKEGIYGSFIWGDVQFFLLDNRTFRTANNNKMISPRQILGEKQFQWLVNSLAYSKATFKFIAMGGQF
LNPNPIFENYATYLEEKNKILSAIQDLKVKNIIFLTGDRHFTELNFLKEKDISIYDLTVSPLTSKPYSPDSEKNPLRVEK
TLVDKRNFGTISISGKRNERKLVLQIFDVYGKELWKKEILSNP
>Mature_443_residues
MKFQISKYKTIFYFFSLFFNYILNAESAKIVSGPILGYSTLKEVLVWVQTDQKSNVKLEYSEIGNSKNKFFSEEIQTKSK
QGFIAKLIANQVEPGKKYNYNILIDGKKIPAKHSQVFQTQPFFAYASNEDPPSFSFALGSCSYINEPEFEVPGKTYGGEY
FIFNSILSKKPNFMLWLGDNIYLREPDWDSRTGFFHRYRQQRGIPELAPLFASVHHYAIWDDHDFGPNDADSSYWMRETS
EEMFKLHWGNPNYAKEGIYGSFIWGDVQFFLLDNRTFRTANNNKMISPRQILGEKQFQWLVNSLAYSKATFKFIAMGGQF
LNPNPIFENYATYLEEKNKILSAIQDLKVKNIIFLTGDRHFTELNFLKEKDISIYDLTVSPLTSKPYSPDSEKNPLRVEK
TLVDKRNFGTISISGKRNERKLVLQIFDVYGKELWKKEILSNP

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.1

Molecular weight: Translated: 51549; Mature: 51549

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00242 INTEGRIN_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQISKYKTIFYFFSLFFNYILNAESAKIVSGPILGYSTLKEVLVWVQTDQKSNVKLEY
CCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHEEEEECCCCCCEEEEH
SEIGNSKNKFFSEEIQTKSKQGFIAKLIANQVEPGKKYNYNILIDGKKIPAKHSQVFQTQ
HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCC
PFFAYASNEDPPSFSFALGSCSYINEPEFEVPGKTYGGEYFIFNSILSKKPNFMLWLGDN
CEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEECCE
IYLREPDWDSRTGFFHRYRQQRGIPELAPLFASVHHYAIWDDHDFGPNDADSSYWMRETS
EEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHCC
EEMFKLHWGNPNYAKEGIYGSFIWGDVQFFLLDNRTFRTANNNKMISPRQILGEKQFQWL
CCEEEEECCCCCCHHCCCCEEEEECCEEEEEEECCEEEECCCCCCCCHHHHHCHHHHHHH
VNSLAYSKATFKFIAMGGQFLNPNPIFENYATYLEEKNKILSAIQDLKVKNIIFLTGDRH
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
FTELNFLKEKDISIYDLTVSPLTSKPYSPDSEKNPLRVEKTLVDKRNFGTISISGKRNER
EEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCEEEEECCCCCH
KLVLQIFDVYGKELWKKEILSNP
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFQISKYKTIFYFFSLFFNYILNAESAKIVSGPILGYSTLKEVLVWVQTDQKSNVKLEY
CCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHEEEEECCCCCCEEEEH
SEIGNSKNKFFSEEIQTKSKQGFIAKLIANQVEPGKKYNYNILIDGKKIPAKHSQVFQTQ
HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCC
PFFAYASNEDPPSFSFALGSCSYINEPEFEVPGKTYGGEYFIFNSILSKKPNFMLWLGDN
CEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEECCE
IYLREPDWDSRTGFFHRYRQQRGIPELAPLFASVHHYAIWDDHDFGPNDADSSYWMRETS
EEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHCC
EEMFKLHWGNPNYAKEGIYGSFIWGDVQFFLLDNRTFRTANNNKMISPRQILGEKQFQWL
CCEEEEECCCCCCHHCCCCEEEEECCEEEEEEECCEEEECCCCCCCCHHHHHCHHHHHHH
VNSLAYSKATFKFIAMGGQFLNPNPIFENYATYLEEKNKILSAIQDLKVKNIIFLTGDRH
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
FTELNFLKEKDISIYDLTVSPLTSKPYSPDSEKNPLRVEKTLVDKRNFGTISISGKRNER
EEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCEEEEECCCCCH
KLVLQIFDVYGKELWKKEILSNP
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: phosphate monoester; H2O

Specific reaction: A phosphate monoester + H2O = an alcohol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA