Click here to switch to the map view.

The map label for this gene is 45659173

Identifier: 45659173

GI number: 45659173

Start: 4112445

End: 4113182

Strand: Direct

Name: 45659173

Synonym: LIC13354

Alternate gene names: NA

Gene position: 4112445-4113182 (Clockwise)

Preceding gene: 45659171

Following gene: 45659174

Centisome position: 96.15

GC content: 34.96

Gene sequence:

>738_bases
ATGGGGCCCCGAAAGGCGAAATCGGAGAGGGGTCCGAGCGGAAATATTCACCATAAAAAAATTCGTTTTCGCTTAGAACT
GTTTCTAAAATCGGTTTCTAATATTCCGAATTTAGAATCTATTTTCTCTTCTACAAAAAAAATTATAGGTGATTACATGA
AACGTAAACCATATTGGAAAATATTAATTTCAACTTTCCTTATATTAGGAATGATGAATTGTTCTCAATCGAAAGACGAC
GGTAACGAAGACGTATTACTTCTTCTTGGAATTGCAGCTCAAAATTATTGGGAAATAGAAGGAACTTGGAACTACTTCAA
CGGAACTAAAAATTATGCTGGAGATCTTTTCAACGAAAATGGAACTACCTTAGTAGGTCAGTATATCATTAATAAAACTC
AAATAACCAGAGAAATTAAGGATACTGGTTTTGGAGGAAGTAAATTAATCGGTAACGTGATGGAAATTGATCGTTCTAAA
AGAGTAGTCTATGTTCAATTTACTCAAGATTCCTCTTTTTCAAAAGGGAAATTCGCTTGGTATCGTTGGACTTCGAAAGA
TGGTTATTATTATATCTGTCCCGATCTTTCTGGTGTAAATAATCAAAATACATTAGATCAAGCTAAAGCAGATAATTTAG
ATAACTTCTCCGACACTACCAATATGAATGCTGGATGCGGTTTGAACAGCGGATTTGCCCCCGGTCCTTGGAGCCGTTTA
GAAATTCAAACTAACTAA

Upstream 100 bases:

>100_bases
ATTCGATTCTAATTGAATCGATAAGCCAGATCTTCCCCGCGAACACGTCCTCGAGGTAGGGACCGTTCGATACTCGCTTC
TGCATTTTCCTGCATCCGCG

Downstream 100 bases:

>100_bases
AAACCTCTAGATAAGTATGCGAACGATTAAAATCGTTCGCATTCAATAAATATAAATTTTAAATCTATGAAAAAAAATAC
CTTTATTTACATTCTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGPRKAKSERGPSGNIHHKKIRFRLELFLKSVSNIPNLESIFSSTKKIIGDYMKRKPYWKILISTFLILGMMNCSQSKDD
GNEDVLLLLGIAAQNYWEIEGTWNYFNGTKNYAGDLFNENGTTLVGQYIINKTQITREIKDTGFGGSKLIGNVMEIDRSK
RVVYVQFTQDSSFSKGKFAWYRWTSKDGYYYICPDLSGVNNQNTLDQAKADNLDNFSDTTNMNAGCGLNSGFAPGPWSRL
EIQTN

Sequences:

>Translated_245_residues
MGPRKAKSERGPSGNIHHKKIRFRLELFLKSVSNIPNLESIFSSTKKIIGDYMKRKPYWKILISTFLILGMMNCSQSKDD
GNEDVLLLLGIAAQNYWEIEGTWNYFNGTKNYAGDLFNENGTTLVGQYIINKTQITREIKDTGFGGSKLIGNVMEIDRSK
RVVYVQFTQDSSFSKGKFAWYRWTSKDGYYYICPDLSGVNNQNTLDQAKADNLDNFSDTTNMNAGCGLNSGFAPGPWSRL
EIQTN
>Mature_244_residues
GPRKAKSERGPSGNIHHKKIRFRLELFLKSVSNIPNLESIFSSTKKIIGDYMKRKPYWKILISTFLILGMMNCSQSKDDG
NEDVLLLLGIAAQNYWEIEGTWNYFNGTKNYAGDLFNENGTTLVGQYIINKTQITREIKDTGFGGSKLIGNVMEIDRSKR
VVYVQFTQDSSFSKGKFAWYRWTSKDGYYYICPDLSGVNNQNTLDQAKADNLDNFSDTTNMNAGCGLNSGFAPGPWSRLE
IQTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27742; Mature: 27610

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRKAKSERGPSGNIHHKKIRFRLELFLKSVSNIPNLESIFSSTKKIIGDYMKRKPYWK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH
ILISTFLILGMMNCSQSKDDGNEDVLLLLGIAAQNYWEIEGTWNYFNGTKNYAGDLFNEN
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCC
GTTLVGQYIINKTQITREIKDTGFGGSKLIGNVMEIDRSKRVVYVQFTQDSSFSKGKFAW
CCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEE
YRWTSKDGYYYICPDLSGVNNQNTLDQAKADNLDNFSDTTNMNAGCGLNSGFAPGPWSRL
EEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EIQTN
EEECC
>Mature Secondary Structure 
GPRKAKSERGPSGNIHHKKIRFRLELFLKSVSNIPNLESIFSSTKKIIGDYMKRKPYWK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH
ILISTFLILGMMNCSQSKDDGNEDVLLLLGIAAQNYWEIEGTWNYFNGTKNYAGDLFNEN
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCC
GTTLVGQYIINKTQITREIKDTGFGGSKLIGNVMEIDRSKRVVYVQFTQDSSFSKGKFAW
CCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEE
YRWTSKDGYYYICPDLSGVNNQNTLDQAKADNLDNFSDTTNMNAGCGLNSGFAPGPWSRL
EEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EIQTN
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA