Click here to switch to the map view.

The map label for this gene is yfbQ [C]

Identifier: 45659155

GI number: 45659155

Start: 4091956

End: 4093134

Strand: Direct

Name: yfbQ [C]

Synonym: LIC13336

Alternate gene names: 45659155

Gene position: 4091956-4093134 (Clockwise)

Preceding gene: 45659154

Following gene: 45659166

Centisome position: 95.67

GC content: 33.5

Gene sequence:

>1179_bases
GTGAAAGAATCATTTCGGTTTAGTTCCCGGTTTTCATTCCAAGAAGGGGAAAATGAGTTTTCTAAAATTTTATCCGAATA
TAAGAAAAATCAAATTTATTATTTTGATCTAACTCTCTCCAACCCTACACAAGCTGATTTTCAATATCCTACGGAAGCAA
TTCGACATAGTTTTGCAACTTCGGACCTAATTACCTATCATCCAAATCCTCAAGGAAACTTAGAGACTCGAAAAAAAATC
CAGGGATACTACGCTTCAAAAGGATTGGATATAGACCCGGATGATTTGTTTTTAACTTCCTCTTCTTCGGAAGCATATTC
GTTTTTGTTTAAGTTATTTTGTGATCCAGGGGATTCCATCCTAATCCCAGCACCTGGTTATCCGTTGTTTGAATTTCTTT
CCGTGATGGAAGGAATTCGAACCGTTTCCTATTTTACTAAAAAAGAAAATCGTTGGAAACTAACAAACTCAGACTTAGAT
CCAAAAGATTTAGAAAAATGTAAACTTATTTTATCGGTCAGTCCAAACAATCCCACAGGTTCGGTCTTAAATCAGTCTGA
TTTTTATTCTATAAAAAATACTTTAAAATATTATAATTTACCTATAATTATTGACGAAGTTTTTTCAGACTACATTTACG
GAACAGAGTCTTATAATACTTTGATCGATCCGGACATACCAGTTGTAAACGTAAATGGTCTGTCAAAAATGTTAGGTCTT
CCAGGAATGAAATTATCTTGGATTTTACTCAGTGGACCAAAAGTCTGGAAACAAAAATCGAAAGAATATTTGGAACTAAT
ATCCGATACCTATCTTTCCGTAAATACTCCCGTTCAAAATATACTCGCAGATTTTTTTCAATGGAAAAATTTCATCCAAT
CCCAAATCAACAAACGTATTCAGAGAAATCTTTCTTTTTTAAAAGAAAATTTGAGCCACGATGGTGTTTCTAAAAAAATC
CAATGTGATTTTCCAAACGCAGGTTGGTATTGCGTTTTAGAAAGTGAAGAATTTTTTCCCGAAGAGAAATACGCACTTCG
TTTATTAAAAGAAAAAAAGATATACGTTCATCCCGGAGAAATATTCGGCTTTCCAGAAGAAAAAAATCTGGGAAGAATCG
TTCTCAGTCTTTTAACTCCAACAGAAACGTTTGAGTTTGGTGTCAAAGAAATTCTTTGA

Upstream 100 bases:

>100_bases
AAAATTTTAAATTCTACTTTCCATTAACTACTTCGATTTTAGTTAGTGTTCTAATTTCTTTAATCCTTTTTTTAATTCAA
AAATTCAAAAACGGCTCTCC

Downstream 100 bases:

>100_bases
TAGTCTTATTAAAGGAACATTTTTAGAGCTTGCCACAAATCCTAAACACCGACTCCTAGGGAGTTTCGACCGACCTGTAG
AGCGACCATAGAAGCAATGC

Product: putative aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKESFRFSSRFSFQEGENEFSKILSEYKKNQIYYFDLTLSNPTQADFQYPTEAIRHSFATSDLITYHPNPQGNLETRKKI
QGYYASKGLDIDPDDLFLTSSSSEAYSFLFKLFCDPGDSILIPAPGYPLFEFLSVMEGIRTVSYFTKKENRWKLTNSDLD
PKDLEKCKLILSVSPNNPTGSVLNQSDFYSIKNTLKYYNLPIIIDEVFSDYIYGTESYNTLIDPDIPVVNVNGLSKMLGL
PGMKLSWILLSGPKVWKQKSKEYLELISDTYLSVNTPVQNILADFFQWKNFIQSQINKRIQRNLSFLKENLSHDGVSKKI
QCDFPNAGWYCVLESEEFFPEEKYALRLLKEKKIYVHPGEIFGFPEEKNLGRIVLSLLTPTETFEFGVKEIL

Sequences:

>Translated_392_residues
MKESFRFSSRFSFQEGENEFSKILSEYKKNQIYYFDLTLSNPTQADFQYPTEAIRHSFATSDLITYHPNPQGNLETRKKI
QGYYASKGLDIDPDDLFLTSSSSEAYSFLFKLFCDPGDSILIPAPGYPLFEFLSVMEGIRTVSYFTKKENRWKLTNSDLD
PKDLEKCKLILSVSPNNPTGSVLNQSDFYSIKNTLKYYNLPIIIDEVFSDYIYGTESYNTLIDPDIPVVNVNGLSKMLGL
PGMKLSWILLSGPKVWKQKSKEYLELISDTYLSVNTPVQNILADFFQWKNFIQSQINKRIQRNLSFLKENLSHDGVSKKI
QCDFPNAGWYCVLESEEFFPEEKYALRLLKEKKIYVHPGEIFGFPEEKNLGRIVLSLLTPTETFEFGVKEIL
>Mature_392_residues
MKESFRFSSRFSFQEGENEFSKILSEYKKNQIYYFDLTLSNPTQADFQYPTEAIRHSFATSDLITYHPNPQGNLETRKKI
QGYYASKGLDIDPDDLFLTSSSSEAYSFLFKLFCDPGDSILIPAPGYPLFEFLSVMEGIRTVSYFTKKENRWKLTNSDLD
PKDLEKCKLILSVSPNNPTGSVLNQSDFYSIKNTLKYYNLPIIIDEVFSDYIYGTESYNTLIDPDIPVVNVNGLSKMLGL
PGMKLSWILLSGPKVWKQKSKEYLELISDTYLSVNTPVQNILADFFQWKNFIQSQINKRIQRNLSFLKENLSHDGVSKKI
QCDFPNAGWYCVLESEEFFPEEKYALRLLKEKKIYVHPGEIFGFPEEKNLGRIVLSLLTPTETFEFGVKEIL

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=339, Percent_Identity=26.2536873156342, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI19263340, Length=155, Percent_Identity=28.3870967741935, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI215599424, Length=155, Percent_Identity=28.3870967741935, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788627, Length=348, Percent_Identity=26.1494252873563, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787710, Length=307, Percent_Identity=24.1042345276873, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17567663, Length=351, Percent_Identity=23.0769230769231, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71981209, Length=330, Percent_Identity=23.030303030303, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567369, Length=356, Percent_Identity=24.1573033707865, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71981215, Length=190, Percent_Identity=23.6842105263158, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994476, Length=342, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=342, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323118, Length=314, Percent_Identity=22.6114649681529, Blast_Score=73, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6320317, Length=168, Percent_Identity=26.7857142857143, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI18859735, Length=354, Percent_Identity=23.4463276836158, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 45275; Mature: 45275

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESFRFSSRFSFQEGENEFSKILSEYKKNQIYYFDLTLSNPTQADFQYPTEAIRHSFAT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCHHHHHHHHCC
SDLITYHPNPQGNLETRKKIQGYYASKGLDIDPDDLFLTSSSSEAYSFLFKLFCDPGDSI
CCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEE
LIPAPGYPLFEFLSVMEGIRTVSYFTKKENRWKLTNSDLDPKDLEKCKLILSVSPNNPTG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHEEEEEEECCCCCCC
SVLNQSDFYSIKNTLKYYNLPIIIDEVFSDYIYGTESYNTLIDPDIPVVNVNGLSKMLGL
CCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCEECCCCCEEECCCHHHHHCC
PGMKLSWILLSGPKVWKQKSKEYLELISDTYLSVNTPVQNILADFFQWKNFIQSQINKRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QRNLSFLKENLSHDGVSKKIQCDFPNAGWYCVLESEEFFPEEKYALRLLKEKKIYVHPGE
HHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCHHCCCCHHHHHHHHHCCEEEEECCH
IFGFPEEKNLGRIVLSLLTPTETFEFGVKEIL
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKESFRFSSRFSFQEGENEFSKILSEYKKNQIYYFDLTLSNPTQADFQYPTEAIRHSFAT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCHHHHHHHHCC
SDLITYHPNPQGNLETRKKIQGYYASKGLDIDPDDLFLTSSSSEAYSFLFKLFCDPGDSI
CCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEE
LIPAPGYPLFEFLSVMEGIRTVSYFTKKENRWKLTNSDLDPKDLEKCKLILSVSPNNPTG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHEEEEEEECCCCCCC
SVLNQSDFYSIKNTLKYYNLPIIIDEVFSDYIYGTESYNTLIDPDIPVVNVNGLSKMLGL
CCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCEECCCCCEEECCCHHHHHCC
PGMKLSWILLSGPKVWKQKSKEYLELISDTYLSVNTPVQNILADFFQWKNFIQSQINKRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QRNLSFLKENLSHDGVSKKIQCDFPNAGWYCVLESEEFFPEEKYALRLLKEKKIYVHPGE
HHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCHHCCCCHHHHHHHHHCCEEEEECCH
IFGFPEEKNLGRIVLSLLTPTETFEFGVKEIL
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]