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The map label for this gene is 45659056

Identifier: 45659056

GI number: 45659056

Start: 3970729

End: 3971652

Strand: Direct

Name: 45659056

Synonym: LIC13235

Alternate gene names: NA

Gene position: 3970729-3971652 (Clockwise)

Preceding gene: 45659055

Following gene: 304570506

Centisome position: 92.84

GC content: 33.66

Gene sequence:

>924_bases
GTGCCTCATCTAATGCTTATCCCGATTTGTCTTGTAGGTGGTTGGATACTCAAACGAGTAAAAATATTTCCCGAAAATTC
AGGAATTGTACTCGGAAACTTCGTAGTTTATGTTTCTTTACCATCTCTGATTTTAATTAGTAATATAAAACTGGAAAACT
CTTTGTTTTTTTTGGCATTTATACCTTGGCTGATCTTCGGAGTTTCAGTTGTATTCTTTTATACCATCGGAAAATTCTTT
CATTGGGATTTGGAAACAAAAATCGCAACTATACTTTGTTGTGGTTTGGGAAATACCTCTTTTTTAGGATTGCCCATTTT
AAGAATGTTATATGGAGAAGAAGTCACCAACTCAGTGTTAATCGTAGATCAATTGGGGACCTTTCTCTGTCTCGCTATTC
CAGGATTTATTGTCGCGTTACGTTTTCAAAAAGACCCGAATATAAACGGAAATCCGATTGCTTCTGTTTTAAAAAAGCTC
TTTACTTTTCCTCCTTTTCTTGCTTTACTTTTTTCGTTTTTTCTCAGATTTTTTCCCCTTTCAGAATCAATTTATTTTGT
ACTGAAAATATTGGGAGAAACTTTAGCACCAATCGCATTGTTCGCAGTAGGATTTCAAATGGAATTAGGTTCTAAACCAA
AAAAATCGGAGAATTTTATACAACCTCTATCTATCGGACTTATTTATAAATTGCTAATTTCTCCTATTATGATATTTTTA
ATTTATATTTTTCTAAACATAAACCCAAACCATCTAAAGGTAGCAATCTTAGAGGCGGGAATGGCTCCAATGATTACCGC
GTCTATCATTTCCATTCAAATGGGTTTTAGACCTAGTCTTTCTGCTGCCTTTCCAGGGATAGGAATCTTATGTTCGATTC
CAACCTTGTTTTTATTTTATTTTATTCTGGAGAATTTTTTCTGA

Upstream 100 bases:

>100_bases
GAGCATTTCCCTCGTAATGAAAAGGTCGCCGGTTCAATTCCGGCAGCGGGCTAATCTTAAATCTCTTGCCCTATCTCAAA
CAATATGAACTCTGTACTGA

Downstream 100 bases:

>100_bases
CTGATTTTTCTGAATCACTGATCGATCTATTTTCCGCAGTTAAAACCGGAAAAACGAACGAAATTCAAAAACTTCTAAAC
GCCTTGAAAGGGGAAGCAAT

Product: malate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPHLMLIPICLVGGWILKRVKIFPENSGIVLGNFVVYVSLPSLILISNIKLENSLFFLAFIPWLIFGVSVVFFYTIGKFF
HWDLETKIATILCCGLGNTSFLGLPILRMLYGEEVTNSVLIVDQLGTFLCLAIPGFIVALRFQKDPNINGNPIASVLKKL
FTFPPFLALLFSFFLRFFPLSESIYFVLKILGETLAPIALFAVGFQMELGSKPKKSENFIQPLSIGLIYKLLISPIMIFL
IYIFLNINPNHLKVAILEAGMAPMITASIISIQMGFRPSLSAAFPGIGILCSIPTLFLFYFILENFF

Sequences:

>Translated_307_residues
MPHLMLIPICLVGGWILKRVKIFPENSGIVLGNFVVYVSLPSLILISNIKLENSLFFLAFIPWLIFGVSVVFFYTIGKFF
HWDLETKIATILCCGLGNTSFLGLPILRMLYGEEVTNSVLIVDQLGTFLCLAIPGFIVALRFQKDPNINGNPIASVLKKL
FTFPPFLALLFSFFLRFFPLSESIYFVLKILGETLAPIALFAVGFQMELGSKPKKSENFIQPLSIGLIYKLLISPIMIFL
IYIFLNINPNHLKVAILEAGMAPMITASIISIQMGFRPSLSAAFPGIGILCSIPTLFLFYFILENFF
>Mature_306_residues
PHLMLIPICLVGGWILKRVKIFPENSGIVLGNFVVYVSLPSLILISNIKLENSLFFLAFIPWLIFGVSVVFFYTIGKFFH
WDLETKIATILCCGLGNTSFLGLPILRMLYGEEVTNSVLIVDQLGTFLCLAIPGFIVALRFQKDPNINGNPIASVLKKLF
TFPPFLALLFSFFLRFFPLSESIYFVLKILGETLAPIALFAVGFQMELGSKPKKSENFIQPLSIGLIYKLLISPIMIFLI
YIFLNINPNHLKVAILEAGMAPMITASIISIQMGFRPSLSAAFPGIGILCSIPTLFLFYFILENFF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34326; Mature: 34195

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLMLIPICLVGGWILKRVKIFPENSGIVLGNFVVYVSLPSLILISNIKLENSLFFLAF
CCCCEEHHHHHHHHHHHHHHHEEECCCCEEEEHHEEEEEHHHHHHHCCEEECCCCHHHHH
IPWLIFGVSVVFFYTIGKFFHWDLETKIATILCCGLGNTSFLGLPILRMLYGEEVTNSVL
HHHHHHHHHHHHHHHHHHHHEECHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCEE
IVDQLGTFLCLAIPGFIVALRFQKDPNINGNPIASVLKKLFTFPPFLALLFSFFLRFFPL
EHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
SESIYFVLKILGETLAPIALFAVGFQMELGSKPKKSENFIQPLSIGLIYKLLISPIMIFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IYIFLNINPNHLKVAILEAGMAPMITASIISIQMGFRPSLSAAFPGIGILCSIPTLFLFY
HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHEECCCCCCCHHCCCCCHHHHHHHHHHHHH
FILENFF
HHHHHCC
>Mature Secondary Structure 
PHLMLIPICLVGGWILKRVKIFPENSGIVLGNFVVYVSLPSLILISNIKLENSLFFLAF
CCCEEHHHHHHHHHHHHHHHEEECCCCEEEEHHEEEEEHHHHHHHCCEEECCCCHHHHH
IPWLIFGVSVVFFYTIGKFFHWDLETKIATILCCGLGNTSFLGLPILRMLYGEEVTNSVL
HHHHHHHHHHHHHHHHHHHHEECHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCEE
IVDQLGTFLCLAIPGFIVALRFQKDPNINGNPIASVLKKLFTFPPFLALLFSFFLRFFPL
EHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
SESIYFVLKILGETLAPIALFAVGFQMELGSKPKKSENFIQPLSIGLIYKLLISPIMIFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IYIFLNINPNHLKVAILEAGMAPMITASIISIQMGFRPSLSAAFPGIGILCSIPTLFLFY
HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHEECCCCCCCHHCCCCCHHHHHHHHHHHHH
FILENFF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]