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The map label for this gene is 45659013

Identifier: 45659013

GI number: 45659013

Start: 3905670

End: 3907367

Strand: Direct

Name: 45659013

Synonym: LIC13191

Alternate gene names: NA

Gene position: 3905670-3907367 (Clockwise)

Preceding gene: 45659003

Following gene: 45659016

Centisome position: 91.31

GC content: 35.39

Gene sequence:

>1698_bases
ATGCGGCTACTGCTCATTCAACCTCCGGTGGAAGATTTTTACGATACCGATATTCGATTACAGCCGATCGGACTTTGTTA
TCTCAAAGGGGCCATACAAAAATTTTTACCGAATGTGGAAGTAATAATCAGAGATTTTCATAGAGGATTAGGAAACAAAC
TCGCCGGAAGAAGAACGATTCCTATTCCAAACGAACTCAAATACCTAAAAGAATACTATCCGGTTCCGGATCGAAGTCCA
TTCTCAACATTTTTTGAATACTTTCATTTTGGCGCTTCTTATGAAGATATATCAAAAGAAGTAAAATACTTAAATCCAGA
TCTTGTAGGAATTTCCTCTTTATTTTCTCCCTATTATAGAGAAGCTTTAAAAACAGCGGAAGAGATAAAAAAAGTTTTAA
ACGTTCCCGTTTTGATGGGAGGTTCTCACGTTTCCGCCTGTCCCGAATTGATGCTTTCAAATCCGTATGTGGATTTCATA
ATTCGAGGAGAAGGAGAAAAAGCGATCTGTGACTTTTTAAACGAATTTCAAAATGAAAAACGTTATGCGCTCGTTGGTTC
CCTTGGATGGAAAGAAAGTGGAAAAATGTATCTAAATCCGATTGGGGAAAATTTTCCGATTCAAGATCTACCTCCTCCCG
ATCTTTCCTATTTATCGAAAATACATTATCTTTTTGAAGGAAAACCGATGCGTTTTATCATCACTTCTAGAAGTTGTCCG
CATCGTTGTAGTTTTTGTTCAGTTCACACAACTTTTGGAACCAAATATAGAAGAAACACCGTAGAACGAGTGTTAAGTGA
AATCAAAAAATCCTACGAATTAGGTTATCGAGTATTTGATTTTGAAGACGACAACTTGACTTTCTTTCGTCCGGAAATGA
AACAACTCTGTGAAGAATTGATTGATGCCTTTCCAAAAAAAGACGTTCGGTTTGTGGCTATGAATGGAATCTCTTATATC
AGCTTAGATCCAGAACTTCTTCGCTTAATGAAAGAAGCAGGATTTACAAATTTAAACTTAGCTCTAGTCAGTTCTGATAA
ACTCGTTCGAGAAACAACCAAAAGACCTCATACGGTCGAAAAATATATTCAGATCGTTCAAGAAGGATTTAAGCTTGGAT
TCCAAATTACCTCTTATCAAATTCTCGGACTTCCGATGGAAACTTTGGAATCCATGATTCAAACTCTTCAATTTAACGCG
GGACAGCCAGTTTTAATGGGGGCCTCTCTTTTTTATCTGACTCCAAATTCTCCGATTGCATCTAACTTTCCGGAAAGAAA
CGAATCGGACATTTTTCTTGCAAGGTTAACTTCCATGGCAATTCCCTCCGAACATTTTGATAGGGAAGATATTTATTCTC
TTTTTATAATTACTAGAATGTTAAATTTTCTAAAAAGCGCTCAAATCCCCAAAGACAATTTGGCTTCTTTAAATGATACA
TTTAGAATATTAGAAAATTATGATTCTAGATCTTTTCTAGGAGTAAAACTCTTTAAAAAATTACTGGAAGAGAAAAAACT
ATACGCTTCTGCACCTCAAGGTTTGATTTTTTTAGATAAATTTCGATACAAAGTTTTTGAAATGGTTTTTTCAGGATTGG
ACAAGATCACAACCCTTTCCGGTGGAAATATTGATCTGAAAGATCTAAACTCTTTTATGTCCTTAAAAGAACCGAATTTA
GAATTGAACTCCTATTAA

Upstream 100 bases:

>100_bases
GAAGTATAACTTAAAATTTACTTTAGGTCAAATTCAATTCTTAGACTTAAAACAAAACGAAGAGGCTTGATCTTGTAATT
CCTTCTGTTTCTATGGCGAC

Downstream 100 bases:

>100_bases
ATTGAAAGTTTAAAAGTGCAGATAAAATGATCTACAGAAAGCAAAAAATTTTTTGAACATATATTTACGACGAAAGAGAA
TCCAAAATTTTTTTACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MRLLLIQPPVEDFYDTDIRLQPIGLCYLKGAIQKFLPNVEVIIRDFHRGLGNKLAGRRTIPIPNELKYLKEYYPVPDRSP
FSTFFEYFHFGASYEDISKEVKYLNPDLVGISSLFSPYYREALKTAEEIKKVLNVPVLMGGSHVSACPELMLSNPYVDFI
IRGEGEKAICDFLNEFQNEKRYALVGSLGWKESGKMYLNPIGENFPIQDLPPPDLSYLSKIHYLFEGKPMRFIITSRSCP
HRCSFCSVHTTFGTKYRRNTVERVLSEIKKSYELGYRVFDFEDDNLTFFRPEMKQLCEELIDAFPKKDVRFVAMNGISYI
SLDPELLRLMKEAGFTNLNLALVSSDKLVRETTKRPHTVEKYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQFNA
GQPVLMGASLFYLTPNSPIASNFPERNESDIFLARLTSMAIPSEHFDREDIYSLFIITRMLNFLKSAQIPKDNLASLNDT
FRILENYDSRSFLGVKLFKKLLEEKKLYASAPQGLIFLDKFRYKVFEMVFSGLDKITTLSGGNIDLKDLNSFMSLKEPNL
ELNSY

Sequences:

>Translated_565_residues
MRLLLIQPPVEDFYDTDIRLQPIGLCYLKGAIQKFLPNVEVIIRDFHRGLGNKLAGRRTIPIPNELKYLKEYYPVPDRSP
FSTFFEYFHFGASYEDISKEVKYLNPDLVGISSLFSPYYREALKTAEEIKKVLNVPVLMGGSHVSACPELMLSNPYVDFI
IRGEGEKAICDFLNEFQNEKRYALVGSLGWKESGKMYLNPIGENFPIQDLPPPDLSYLSKIHYLFEGKPMRFIITSRSCP
HRCSFCSVHTTFGTKYRRNTVERVLSEIKKSYELGYRVFDFEDDNLTFFRPEMKQLCEELIDAFPKKDVRFVAMNGISYI
SLDPELLRLMKEAGFTNLNLALVSSDKLVRETTKRPHTVEKYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQFNA
GQPVLMGASLFYLTPNSPIASNFPERNESDIFLARLTSMAIPSEHFDREDIYSLFIITRMLNFLKSAQIPKDNLASLNDT
FRILENYDSRSFLGVKLFKKLLEEKKLYASAPQGLIFLDKFRYKVFEMVFSGLDKITTLSGGNIDLKDLNSFMSLKEPNL
ELNSY
>Mature_565_residues
MRLLLIQPPVEDFYDTDIRLQPIGLCYLKGAIQKFLPNVEVIIRDFHRGLGNKLAGRRTIPIPNELKYLKEYYPVPDRSP
FSTFFEYFHFGASYEDISKEVKYLNPDLVGISSLFSPYYREALKTAEEIKKVLNVPVLMGGSHVSACPELMLSNPYVDFI
IRGEGEKAICDFLNEFQNEKRYALVGSLGWKESGKMYLNPIGENFPIQDLPPPDLSYLSKIHYLFEGKPMRFIITSRSCP
HRCSFCSVHTTFGTKYRRNTVERVLSEIKKSYELGYRVFDFEDDNLTFFRPEMKQLCEELIDAFPKKDVRFVAMNGISYI
SLDPELLRLMKEAGFTNLNLALVSSDKLVRETTKRPHTVEKYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQFNA
GQPVLMGASLFYLTPNSPIASNFPERNESDIFLARLTSMAIPSEHFDREDIYSLFIITRMLNFLKSAQIPKDNLASLNDT
FRILENYDSRSFLGVKLFKKLLEEKKLYASAPQGLIFLDKFRYKVFEMVFSGLDKITTLSGGNIDLKDLNSFMSLKEPNL
ELNSY

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 65096; Mature: 65096

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLIQPPVEDFYDTDIRLQPIGLCYLKGAIQKFLPNVEVIIRDFHRGLGNKLAGRRTI
CEEEEECCCHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHCCCCCCC
PIPNELKYLKEYYPVPDRSPFSTFFEYFHFGASYEDISKEVKYLNPDLVGISSLFSPYYR
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EALKTAEEIKKVLNVPVLMGGSHVSACPELMLSNPYVDFIIRGEGEKAICDFLNEFQNEK
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC
RYALVGSLGWKESGKMYLNPIGENFPIQDLPPPDLSYLSKIHYLFEGKPMRFIITSRSCP
EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
HRCSFCSVHTTFGTKYRRNTVERVLSEIKKSYELGYRVFDFEDDNLTFFRPEMKQLCEEL
CCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHH
IDAFPKKDVRFVAMNGISYISLDPELLRLMKEAGFTNLNLALVSSDKLVRETTKRPHTVE
HHHCCCCCEEEEEECCEEEEECCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCHHHH
KYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQFNAGQPVLMGASLFYLTPNSPIA
HHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCCC
SNFPERNESDIFLARLTSMAIPSEHFDREDIYSLFIITRMLNFLKSAQIPKDNLASLNDT
CCCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FRILENYDSRSFLGVKLFKKLLEEKKLYASAPQGLIFLDKFRYKVFEMVFSGLDKITTLS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCHHHHEECC
GGNIDLKDLNSFMSLKEPNLELNSY
CCCEEHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRLLLIQPPVEDFYDTDIRLQPIGLCYLKGAIQKFLPNVEVIIRDFHRGLGNKLAGRRTI
CEEEEECCCHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHCCCCCCC
PIPNELKYLKEYYPVPDRSPFSTFFEYFHFGASYEDISKEVKYLNPDLVGISSLFSPYYR
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EALKTAEEIKKVLNVPVLMGGSHVSACPELMLSNPYVDFIIRGEGEKAICDFLNEFQNEK
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC
RYALVGSLGWKESGKMYLNPIGENFPIQDLPPPDLSYLSKIHYLFEGKPMRFIITSRSCP
EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
HRCSFCSVHTTFGTKYRRNTVERVLSEIKKSYELGYRVFDFEDDNLTFFRPEMKQLCEEL
CCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHH
IDAFPKKDVRFVAMNGISYISLDPELLRLMKEAGFTNLNLALVSSDKLVRETTKRPHTVE
HHHCCCCCEEEEEECCEEEEECCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCHHHH
KYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQFNAGQPVLMGASLFYLTPNSPIA
HHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCCC
SNFPERNESDIFLARLTSMAIPSEHFDREDIYSLFIITRMLNFLKSAQIPKDNLASLNDT
CCCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FRILENYDSRSFLGVKLFKKLLEEKKLYASAPQGLIFLDKFRYKVFEMVFSGLDKITTLS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCHHHHEECC
GGNIDLKDLNSFMSLKEPNLELNSY
CCCEEHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]