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The map label for this gene is 45659003

Identifier: 45659003

GI number: 45659003

Start: 3892897

End: 3893328

Strand: Direct

Name: 45659003

Synonym: LIC13181

Alternate gene names: NA

Gene position: 3892897-3893328 (Clockwise)

Preceding gene: 45658999

Following gene: 45659013

Centisome position: 91.02

GC content: 36.11

Gene sequence:

>432_bases
ATGCAATTACGTAAAAAAACTTCACGATCTCATATCTTCCATGAAAAGGACTTCGAGATAAAACCCTCTTCGATTCCTGG
AATTGGAATGGGATTATTCCCAAAAGAAAACGTAAACAAAGGTGATACCATCGGATATTATACTGGAAAAATTCTTACCG
ATAGGACCGCAAACTCATCAAAATACTGCGAATCAAAGTATTTACTTTGGATCTGCAAGGACCATTGGATTTACGGAGAA
GGAAAAGAAAGCAACTACACTCGTTTTATGAATCATAGTTCTAAACCAAACGTAAGACTTGTAGTATCAGTTCGTTGGAA
AACCGCAAGATTTGAAGCCATCCGAAAAATTAAGTCAGGAGAAGAATTATTCTTCGATTATGGGGATGAATATTGGATCA
ATACGGACATAGATCCAATCGAAAGAAATTAG

Upstream 100 bases:

>100_bases
CAAATTTTATACTCTTTTGGAAATGATAGCTTGAGAACAGTTCCTAAGAAGTACAGTTTAAGGTAAATTCTCATCGCATT
CAGGAGTTTGATTTTCACCA

Downstream 100 bases:

>100_bases
AAATCACCTCAAAAAATAGATTTAAACTGTCGTTTTCCATTCAAAATAAGATAAATTTTTTATTGAATGAAAATCGTATA
ACGGCATTTCACTGAGAAGT

Product: SET domain-containing protein

Products: NA

Alternate protein names: SET Domain-Containing Protein; Nuclear Protein SET

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQLRKKTSRSHIFHEKDFEIKPSSIPGIGMGLFPKENVNKGDTIGYYTGKILTDRTANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVRLVVSVRWKTARFEAIRKIKSGEELFFDYGDEYWINTDIDPIERN

Sequences:

>Translated_143_residues
MQLRKKTSRSHIFHEKDFEIKPSSIPGIGMGLFPKENVNKGDTIGYYTGKILTDRTANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVRLVVSVRWKTARFEAIRKIKSGEELFFDYGDEYWINTDIDPIERN
>Mature_143_residues
MQLRKKTSRSHIFHEKDFEIKPSSIPGIGMGLFPKENVNKGDTIGYYTGKILTDRTANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVRLVVSVRWKTARFEAIRKIKSGEELFFDYGDEYWINTDIDPIERN

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI18543183, Length=115, Percent_Identity=40, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16839; Mature: 16839

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRKKTSRSHIFHEKDFEIKPSSIPGIGMGLFPKENVNKGDTIGYYTGKILTDRTANSS
CCCCCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCCC
KYCESKYLLWICKDHWIYGEGKESNYTRFMNHSSKPNVRLVVSVRWKTARFEAIRKIKSG
CCCCCEEEEEEEECCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCC
EELFFDYGDEYWINTDIDPIERN
CEEEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure
MQLRKKTSRSHIFHEKDFEIKPSSIPGIGMGLFPKENVNKGDTIGYYTGKILTDRTANSS
CCCCCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCCC
KYCESKYLLWICKDHWIYGEGKESNYTRFMNHSSKPNVRLVVSVRWKTARFEAIRKIKSG
CCCCCEEEEEEEECCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCC
EELFFDYGDEYWINTDIDPIERN
CEEEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA