Click here to switch to the map view.

The map label for this gene is 45658995

Identifier: 45658995

GI number: 45658995

Start: 3884590

End: 3885507

Strand: Direct

Name: 45658995

Synonym: LIC13173

Alternate gene names: NA

Gene position: 3884590-3885507 (Clockwise)

Preceding gene: 45658994

Following gene: 45658996

Centisome position: 90.82

GC content: 38.56

Gene sequence:

>918_bases
ATGCTAAACTTACAAGAAATCTGCAAGAATCGACTGAATTTCGTTCGAAACTGCGAAACACTTGTATATAAAAATGGAAA
AAGTTGTAAAAAAATCCAAAGTTCTTTTGCCAATCTTTTCAACGAAACAGATTGGTTCCGATTTCATAAAATCACCCAAC
TTACAACCATACTTCTTATCTTTTCTTTTTTAAATCCTAACTCTCTATTCTCTCAGAGCCAGACAGACTTTGCCGATCCT
TATGATTTTAATCTAAGGAACTATAAAGATTCTCAAGCCCGAGAAGTGTTTCAGGAATATACGGTTCCCCCTACTTTTAA
AAAACCCGCCTTAATTTCTCCTAAAAACGTTCAGATCCCTTTTGAAAGCCCCTTCCCAGCTACAGGAGGGTTGCGAAGAA
CCACAACTCCAAATACGGAAAGAAGACAGGACAATCTAGTAAATCCTCTTACAGGCAATATCAACGTAGAAACGATTCTT
CAAAGACAGGCACAACAACAAGCAGATAAAAAAAGAAAACAGAATCAAGTTTTCGAAGAAGAAAAATATACCGAAACCAC
GTTTCGTCGTTTTACCATCATCTTTTTTATGACACTTCCGATCACGCTAGGAATAGGATATGCAATCGCCGCCAATGCAA
GAGTTCCAGGTTATCATAAATTCCAAAAAACTTTCGGAGGCTCAATTTTTATTTTTACTTTCGGAACCAGTCTTGCTTTT
GCAAACGCCTGGCACGATATGAAAGAATATGAATCCATGAAAAAGGAGAATCAACCAGAGTCTCCTCCCGTAGAACCCAC
ATCCGCAGACTCTCTAGGTTTCGGAAATTCTCTTCCGATTTCCGGTTCGGCCTCAGCTTCTCCGGTTCCAGGAAGAGAAT
ATAAACTGGAGATTTCTCTCTTTAACGTCAGTTTTTAA

Upstream 100 bases:

>100_bases
ATTGTAAATATGCTTGTGAGTTCCGGCGCTTGCAGCTCATCCGGGAGAACTCTAAAAATCCTTGCCTCGACCTATGTCTA
AAAGATTTTAGAAGAAAGCC

Downstream 100 bases:

>100_bases
TGAATTCCATTAAAGACATTATATTCAAACTATCAAATATAAGAAGAAACGTAACTATCTTTTATCAAACTAAGATCTAT
CCCTTTCTCAGAATTTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLNLQEICKNRLNFVRNCETLVYKNGKSCKKIQSSFANLFNETDWFRFHKITQLTTILLIFSFLNPNSLFSQSQTDFADP
YDFNLRNYKDSQAREVFQEYTVPPTFKKPALISPKNVQIPFESPFPATGGLRRTTTPNTERRQDNLVNPLTGNINVETIL
QRQAQQQADKKRKQNQVFEEEKYTETTFRRFTIIFFMTLPITLGIGYAIAANARVPGYHKFQKTFGGSIFIFTFGTSLAF
ANAWHDMKEYESMKKENQPESPPVEPTSADSLGFGNSLPISGSASASPVPGREYKLEISLFNVSF

Sequences:

>Translated_305_residues
MLNLQEICKNRLNFVRNCETLVYKNGKSCKKIQSSFANLFNETDWFRFHKITQLTTILLIFSFLNPNSLFSQSQTDFADP
YDFNLRNYKDSQAREVFQEYTVPPTFKKPALISPKNVQIPFESPFPATGGLRRTTTPNTERRQDNLVNPLTGNINVETIL
QRQAQQQADKKRKQNQVFEEEKYTETTFRRFTIIFFMTLPITLGIGYAIAANARVPGYHKFQKTFGGSIFIFTFGTSLAF
ANAWHDMKEYESMKKENQPESPPVEPTSADSLGFGNSLPISGSASASPVPGREYKLEISLFNVSF
>Mature_305_residues
MLNLQEICKNRLNFVRNCETLVYKNGKSCKKIQSSFANLFNETDWFRFHKITQLTTILLIFSFLNPNSLFSQSQTDFADP
YDFNLRNYKDSQAREVFQEYTVPPTFKKPALISPKNVQIPFESPFPATGGLRRTTTPNTERRQDNLVNPLTGNINVETIL
QRQAQQQADKKRKQNQVFEEEKYTETTFRRFTIIFFMTLPITLGIGYAIAANARVPGYHKFQKTFGGSIFIFTFGTSLAF
ANAWHDMKEYESMKKENQPESPPVEPTSADSLGFGNSLPISGSASASPVPGREYKLEISLFNVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34861; Mature: 34861

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLQEICKNRLNFVRNCETLVYKNGKSCKKIQSSFANLFNETDWFRFHKITQLTTILLI
CCCHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FSFLNPNSLFSQSQTDFADPYDFNLRNYKDSQAREVFQEYTVPPTFKKPALISPKNVQIP
HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCEEEC
FESPFPATGGLRRTTTPNTERRQDNLVNPLTGNINVETILQRQAQQQADKKRKQNQVFEE
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYTETTFRRFTIIFFMTLPITLGIGYAIAANARVPGYHKFQKTFGGSIFIFTFGTSLAF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHCCCEEEEEECCCHHHH
ANAWHDMKEYESMKKENQPESPPVEPTSADSLGFGNSLPISGSASASPVPGREYKLEISL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
FNVSF
EEECC
>Mature Secondary Structure
MLNLQEICKNRLNFVRNCETLVYKNGKSCKKIQSSFANLFNETDWFRFHKITQLTTILLI
CCCHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FSFLNPNSLFSQSQTDFADPYDFNLRNYKDSQAREVFQEYTVPPTFKKPALISPKNVQIP
HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCEEEC
FESPFPATGGLRRTTTPNTERRQDNLVNPLTGNINVETILQRQAQQQADKKRKQNQVFEE
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYTETTFRRFTIIFFMTLPITLGIGYAIAANARVPGYHKFQKTFGGSIFIFTFGTSLAF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHCCCEEEEEECCCHHHH
ANAWHDMKEYESMKKENQPESPPVEPTSADSLGFGNSLPISGSASASPVPGREYKLEISL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
FNVSF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA