| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is glnD
Identifier: 45658952
GI number: 45658952
Start: 3832946
End: 3835576
Strand: Direct
Name: glnD
Synonym: LIC13130
Alternate gene names: 45658952
Gene position: 3832946-3835576 (Clockwise)
Preceding gene: 45658951
Following gene: 45658956
Centisome position: 89.61
GC content: 35.77
Gene sequence:
>2631_bases ATGCCTTTACAATTAGATATAACCTACAGTTTTCAAAGACTCTTAGAAAAGAGCAGGAACATAGACGGGCGACTCGTCTC AAGACAACTCACGCATATCGTAGATTCTTTTATACTTTCCAAATTTGAAAGTTCAAAAATCGGATTAAAGTCCGGAGACG AACTCTGCATCGTAGCAATGGGCGGATATGGAAGAATGGAAATGGCACCTCATTCTGACATCGACCTGTTGTATTTACAT AACGGAATCAAAGAAGAAAGATTAGAAACGATTATTTCCAAGATCAACACTTATCTATACGATTCTGGAAAAGAAGTCGG ACATTCCTGCAGAACAATTAAAGAATGTTTTCGATATTTAGATAATATGTCTACTTATCACGCGTTTTTAGACGCCCGTT TTCTTGCTGGATCAAAATCTTTATTCGAAAAATTTAAAACAAATTTTCTGGAAAAACTTCCGGTAAAATTAACAAAACGT TATAATGAAATCAAAGAAGAAATTTTAACCTCTCGGTTTCTCAACGAAGAGCGTCCGATTTTGTTAAGCGAACCGAATCT AAAAACAGACCTTTGCGGGCTTCGAGATATACAATATATGTTTTGGATGGAAAAACCGTTTCGCAATCTTCCATCCTTAA GTGGACTATCTATACTTCCAGCCTTTCAAAGAGGAGAAATTCAACTTCTACAAGAAGCTTACGATTTTATTCTGCGTGTA AGAATTGCAATGCACACAATCACTTCCAGGAAAACAGATCGATTAGATCTAAATCTTCAACAAGAAGTTGCGGAATACTT AGGTTACGGTAAAAAAGAAGAACTCTCCTCTGTCGAAAAATTTATGCACGTATTATATCGCCATCAGAAGAATATTTACT TTATCATCCGTACTTACTTAGATTCCATTCTTGAAAAAAGAGGAAGTTCAAAAGGAGAAAACTTTTCCTACGAAGATCTT AATTTTTTTAAAATAGGAGATACCGTTTTTCCTCCGACAACCGGAACATTATTTACAAATCCGCATACGATTTATAGAGA CGTTATGCTTTCTTTCAGGATGATTCAAGAAAAGAATCTACAAGTTTCCGGAACTCTATTAAACGAATTTAGGTTTGCGT CAAATTTTCTGGACGACGATTTTAAATATTCATCTGAAGTAAATGAGGAATTTTTAAAAATCCTGAGAACTCCCTCTCAA AGAGGAAGAATTTTAAAATTAATGCATGAATCCGGAGTTTTAGGAGCGATTCTACCCGAATTTGGCGCTTGTACCAACTT TCCATTATTCAGTTATCACCACGAGTACACTGTAGATGAACATACATTATTGATTTTGCATGAACTCGATCTTCTAGATC GAGGAGAATTTCAAGACGAAGAAATTCAAAAAACCTACAACGAATGTTCCAAAATCGAACTTCTGGCACTTGCAATTTTA TTACACGATGCAGGTAAAGTAAAAGAGGGGGACCATTCCGAATACGGAGCGGAGTTAGTTGTATCTCTAGGAGACAGATT AGGACTTGATGAAGAAGATACGGACTTATGCCGTTTTTTAGTTGAAAAACATACTCTCATGTCGGAGTTGAGCTCTAAAA GAGATATAGGCGATCCAAAATTGATTCTTGACTTTGCAAAAATTGTAGGAAGCAGAGAAAGATTAAGAAAACTTTATATT CTTACCGTAATCGATACAAAGTCTGTTGGGACAGGAGTACTTACCAATTGGAAAAGTGCAATCTTAAATACACTCTATCA AAATACAATTCCCTATCTTGCAGGAGACTCTAAAGATAATTTCGAAGAAACAGGACCTACTCGAGAAATTCAATTAGAAA ATCTAAAAAATTACCTAATCGACAAAGAAGACTTAAACGAAGAAATTTCTAAATCTATCGTCGAGTTCGCCAATCAAGTT GTTCCATCCTCTTATCTGAATACAGTATCTAATCGCAAAATATTAAGAAATTTTAAATCGATTGGAATACTCGCGCAAAA TCCTACTTTTAAAACAATCTTTGAAACAGAACAAGATCCAGCGTTTGTTACGATTGATGTCGTTACATCAAATCAGCCAG AAATTCTCCTGGATCTATCCTGCGCCATTTCTTCCGAAGGGTTAAGTCTTTTAGGAATGAAAAGTTATGCCCTCGGAGAA TATTGGATCACGACAGTCCAATTAACCGATTCGACCGGAGGAGGAAATATTCCACAAAACAAACTGGATCGAGTCGAAAA CAAACTCAAATCAATCTCATCCGGAAATTTAAAACGAGAGAGTATCGCGTTCCAAAGAACGGATTGGAATCCTAGAAAAC CAGCACCTGAAAGTATCGTCAATCGTTCCATTCAATTTTATAACGAGGATCTTCCAGACGTAACAATTATGGAAGTTAGA ATGCCAGATGTTGTAGGTTTGGTTTATAGAATTCTTCAAATTATTCTTTATCTAGATCTTAAGGTTTGTTACTTGAGAGT TTCTACCAGTGCCGACTATGCGTATGATTCTTTTTATCTGCAAACATCTAATGGCTGCAAGCTGGAAGATCAGAACTTAC TTTTGAAATTAAAAGAAAAAATTCTCACCATCCAGCTCGGAGAGCAGATTTTAGAAGAGGTTTCTATTTAA
Upstream 100 bases:
>100_bases AAAATTCGGATTGTATGTTTTAATCGAAACCAGAATATTCCATTCCGGAAAACAAAACAATAAGACAATCTTCTTTTAAA CTCTGGAATTCATTTTTAAC
Downstream 100 bases:
>100_bases ACGGAAAATTTTTTTGATTCAAAAACTAAAATACAAAATGTTTTTATATCTTAATTAAAAAATCATATCCAATTTCAATT TCTTCTTTTGTTTTTATAAA
Product: protein-PII uridylyltransferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MPLQLDITYSFQRLLEKSRNIDGRLVSRQLTHIVDSFILSKFESSKIGLKSGDELCIVAMGGYGRMEMAPHSDIDLLYLH NGIKEERLETIISKINTYLYDSGKEVGHSCRTIKECFRYLDNMSTYHAFLDARFLAGSKSLFEKFKTNFLEKLPVKLTKR YNEIKEEILTSRFLNEERPILLSEPNLKTDLCGLRDIQYMFWMEKPFRNLPSLSGLSILPAFQRGEIQLLQEAYDFILRV RIAMHTITSRKTDRLDLNLQQEVAEYLGYGKKEELSSVEKFMHVLYRHQKNIYFIIRTYLDSILEKRGSSKGENFSYEDL NFFKIGDTVFPPTTGTLFTNPHTIYRDVMLSFRMIQEKNLQVSGTLLNEFRFASNFLDDDFKYSSEVNEEFLKILRTPSQ RGRILKLMHESGVLGAILPEFGACTNFPLFSYHHEYTVDEHTLLILHELDLLDRGEFQDEEIQKTYNECSKIELLALAIL LHDAGKVKEGDHSEYGAELVVSLGDRLGLDEEDTDLCRFLVEKHTLMSELSSKRDIGDPKLILDFAKIVGSRERLRKLYI LTVIDTKSVGTGVLTNWKSAILNTLYQNTIPYLAGDSKDNFEETGPTREIQLENLKNYLIDKEDLNEEISKSIVEFANQV VPSSYLNTVSNRKILRNFKSIGILAQNPTFKTIFETEQDPAFVTIDVVTSNQPEILLDLSCAISSEGLSLLGMKSYALGE YWITTVQLTDSTGGGNIPQNKLDRVENKLKSISSGNLKRESIAFQRTDWNPRKPAPESIVNRSIQFYNEDLPDVTIMEVR MPDVVGLVYRILQIILYLDLKVCYLRVSTSADYAYDSFYLQTSNGCKLEDQNLLLKLKEKILTIQLGEQILEEVSI
Sequences:
>Translated_876_residues MPLQLDITYSFQRLLEKSRNIDGRLVSRQLTHIVDSFILSKFESSKIGLKSGDELCIVAMGGYGRMEMAPHSDIDLLYLH NGIKEERLETIISKINTYLYDSGKEVGHSCRTIKECFRYLDNMSTYHAFLDARFLAGSKSLFEKFKTNFLEKLPVKLTKR YNEIKEEILTSRFLNEERPILLSEPNLKTDLCGLRDIQYMFWMEKPFRNLPSLSGLSILPAFQRGEIQLLQEAYDFILRV RIAMHTITSRKTDRLDLNLQQEVAEYLGYGKKEELSSVEKFMHVLYRHQKNIYFIIRTYLDSILEKRGSSKGENFSYEDL NFFKIGDTVFPPTTGTLFTNPHTIYRDVMLSFRMIQEKNLQVSGTLLNEFRFASNFLDDDFKYSSEVNEEFLKILRTPSQ RGRILKLMHESGVLGAILPEFGACTNFPLFSYHHEYTVDEHTLLILHELDLLDRGEFQDEEIQKTYNECSKIELLALAIL LHDAGKVKEGDHSEYGAELVVSLGDRLGLDEEDTDLCRFLVEKHTLMSELSSKRDIGDPKLILDFAKIVGSRERLRKLYI LTVIDTKSVGTGVLTNWKSAILNTLYQNTIPYLAGDSKDNFEETGPTREIQLENLKNYLIDKEDLNEEISKSIVEFANQV VPSSYLNTVSNRKILRNFKSIGILAQNPTFKTIFETEQDPAFVTIDVVTSNQPEILLDLSCAISSEGLSLLGMKSYALGE YWITTVQLTDSTGGGNIPQNKLDRVENKLKSISSGNLKRESIAFQRTDWNPRKPAPESIVNRSIQFYNEDLPDVTIMEVR MPDVVGLVYRILQIILYLDLKVCYLRVSTSADYAYDSFYLQTSNGCKLEDQNLLLKLKEKILTIQLGEQILEEVSI >Mature_875_residues PLQLDITYSFQRLLEKSRNIDGRLVSRQLTHIVDSFILSKFESSKIGLKSGDELCIVAMGGYGRMEMAPHSDIDLLYLHN GIKEERLETIISKINTYLYDSGKEVGHSCRTIKECFRYLDNMSTYHAFLDARFLAGSKSLFEKFKTNFLEKLPVKLTKRY NEIKEEILTSRFLNEERPILLSEPNLKTDLCGLRDIQYMFWMEKPFRNLPSLSGLSILPAFQRGEIQLLQEAYDFILRVR IAMHTITSRKTDRLDLNLQQEVAEYLGYGKKEELSSVEKFMHVLYRHQKNIYFIIRTYLDSILEKRGSSKGENFSYEDLN FFKIGDTVFPPTTGTLFTNPHTIYRDVMLSFRMIQEKNLQVSGTLLNEFRFASNFLDDDFKYSSEVNEEFLKILRTPSQR GRILKLMHESGVLGAILPEFGACTNFPLFSYHHEYTVDEHTLLILHELDLLDRGEFQDEEIQKTYNECSKIELLALAILL HDAGKVKEGDHSEYGAELVVSLGDRLGLDEEDTDLCRFLVEKHTLMSELSSKRDIGDPKLILDFAKIVGSRERLRKLYIL TVIDTKSVGTGVLTNWKSAILNTLYQNTIPYLAGDSKDNFEETGPTREIQLENLKNYLIDKEDLNEEISKSIVEFANQVV PSSYLNTVSNRKILRNFKSIGILAQNPTFKTIFETEQDPAFVTIDVVTSNQPEILLDLSCAISSEGLSLLGMKSYALGEY WITTVQLTDSTGGGNIPQNKLDRVENKLKSISSGNLKRESIAFQRTDWNPRKPAPESIVNRSIQFYNEDLPDVTIMEVRM PDVVGLVYRILQIILYLDLKVCYLRVSTSADYAYDSFYLQTSNGCKLEDQNLLLKLKEKILTIQLGEQILEEVSI
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=873, Percent_Identity=25.7731958762887, Blast_Score=224, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR005190 - InterPro: IPR003607 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 100647; Mature: 100515
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQLDITYSFQRLLEKSRNIDGRLVSRQLTHIVDSFILSKFESSKIGLKSGDELCIVAM CCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GGYGRMEMAPHSDIDLLYLHNGIKEERLETIISKINTYLYDSGKEVGHSCRTIKECFRYL CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DNMSTYHAFLDARFLAGSKSLFEKFKTNFLEKLPVKLTKRYNEIKEEILTSRFLNEERPI HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LLSEPNLKTDLCGLRDIQYMFWMEKPFRNLPSLSGLSILPAFQRGEIQLLQEAYDFILRV EEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH RIAMHTITSRKTDRLDLNLQQEVAEYLGYGKKEELSSVEKFMHVLYRHQKNIYFIIRTYL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHH DSILEKRGSSKGENFSYEDLNFFKIGDTVFPPTTGTLFTNPHTIYRDVMLSFRMIQEKNL HHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCCEECCCHHHHHHHHHHHHHHHHCCC QVSGTLLNEFRFASNFLDDDFKYSSEVNEEFLKILRTPSQRGRILKLMHESGVLGAILPE EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHC FGACTNFPLFSYHHEYTVDEHTLLILHELDLLDRGEFQDEEIQKTYNECSKIELLALAIL CCCCCCCCCEECCCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LHDAGKVKEGDHSEYGAELVVSLGDRLGLDEEDTDLCRFLVEKHTLMSELSSKRDIGDPK HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH LILDFAKIVGSRERLRKLYILTVIDTKSVGTGVLTNWKSAILNTLYQNTIPYLAGDSKDN HHHHHHHHHCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCC FEETGPTREIQLENLKNYLIDKEDLNEEISKSIVEFANQVVPSSYLNTVSNRKILRNFKS CHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IGILAQNPTFKTIFETEQDPAFVTIDVVTSNQPEILLDLSCAISSEGLSLLGMKSYALGE CCEEECCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEHCCCCCCCEEECHHHHCCC YWITTVQLTDSTGGGNIPQNKLDRVENKLKSISSGNLKRESIAFQRTDWNPRKPAPESIV EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHH NRSIQFYNEDLPDVTIMEVRMPDVVGLVYRILQIILYLDLKVCYLRVSTSADYAYDSFYL HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEE QTSNGCKLEDQNLLLKLKEKILTIQLGEQILEEVSI ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLQLDITYSFQRLLEKSRNIDGRLVSRQLTHIVDSFILSKFESSKIGLKSGDELCIVAM CEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GGYGRMEMAPHSDIDLLYLHNGIKEERLETIISKINTYLYDSGKEVGHSCRTIKECFRYL CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DNMSTYHAFLDARFLAGSKSLFEKFKTNFLEKLPVKLTKRYNEIKEEILTSRFLNEERPI HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LLSEPNLKTDLCGLRDIQYMFWMEKPFRNLPSLSGLSILPAFQRGEIQLLQEAYDFILRV EEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH RIAMHTITSRKTDRLDLNLQQEVAEYLGYGKKEELSSVEKFMHVLYRHQKNIYFIIRTYL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHH DSILEKRGSSKGENFSYEDLNFFKIGDTVFPPTTGTLFTNPHTIYRDVMLSFRMIQEKNL HHHHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCCEECCCHHHHHHHHHHHHHHHHCCC QVSGTLLNEFRFASNFLDDDFKYSSEVNEEFLKILRTPSQRGRILKLMHESGVLGAILPE EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHC FGACTNFPLFSYHHEYTVDEHTLLILHELDLLDRGEFQDEEIQKTYNECSKIELLALAIL CCCCCCCCCEECCCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LHDAGKVKEGDHSEYGAELVVSLGDRLGLDEEDTDLCRFLVEKHTLMSELSSKRDIGDPK HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH LILDFAKIVGSRERLRKLYILTVIDTKSVGTGVLTNWKSAILNTLYQNTIPYLAGDSKDN HHHHHHHHHCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCC FEETGPTREIQLENLKNYLIDKEDLNEEISKSIVEFANQVVPSSYLNTVSNRKILRNFKS CHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IGILAQNPTFKTIFETEQDPAFVTIDVVTSNQPEILLDLSCAISSEGLSLLGMKSYALGE CCEEECCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEHCCCCCCCEEECHHHHCCC YWITTVQLTDSTGGGNIPQNKLDRVENKLKSISSGNLKRESIAFQRTDWNPRKPAPESIV EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHH NRSIQFYNEDLPDVTIMEVRMPDVVGLVYRILQIILYLDLKVCYLRVSTSADYAYDSFYL HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEE QTSNGCKLEDQNLLLKLKEKILTIQLGEQILEEVSI ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA