Click here to switch to the map view.

The map label for this gene is 45658909

Identifier: 45658909

GI number: 45658909

Start: 3768919

End: 3769566

Strand: Reverse

Name: 45658909

Synonym: LIC13083

Alternate gene names: NA

Gene position: 3769566-3768919 (Counterclockwise)

Preceding gene: 45658910

Following gene: 45658906

Centisome position: 88.13

GC content: 38.43

Gene sequence:

>648_bases
ATGGATCAACAGGTGTTAGAGCTAACGCGTAAAGCGGTTGTTCGCGCGACTATCGAGAGGCTTCGTACAACTTATTCGGA
TCTTCTTGTTGTCAAAGGATACGATGGGATTCCGGATTTTTTCGAGTTCAATTTATATTCTCCTTCAAACAAAGAAGAAA
GAGATAACGCTTTAGAAAGTCTTTATGAGAAATTGAAAACGGTCGCTGGTAAATCTATGACCGAAAACATTCATCAGATC
ATTCTGTTAAATCGTTTGACTGACTCTTTGGATTATGACACTGCAAAGGTTGTGATCGAAAACAATCTCATCGAAGATGG
TAAAATTTCTAGAAATAATCTATATGCAGCAATGGGCGAAGCAAATCGTTTTGACGAAAGAAAAACCCAAATCCAAATGG
TTGGTAATACTCTTAAATTCTTTTTTTCCCTTTCTAAACTTCCTATGATCAAACTTGTGATGGCTCCGATTAAGGTTGCC
GCTTCTATGGTAGGTGCAAATTCTTTGGTCGAAACGATGGAAGCAGGATATGAGTTGTCCAGCAAGATCAAGGATCTAAA
TCCTTTTATAGATGCGTTTCTGGATAGAGAGATTCGTCTGATCACAAAATTAGAGACTGGGCATCCTGTTGGAGAACTTG
CTAATTGA

Upstream 100 bases:

>100_bases
TTTTGCCAGCTAAATTGAGATCCGGAGCCATCGTAGTCAAGGATTGATTTTTATATTGACCTAAGTTACGTAGCCTACGA
AATCTGTTTCTGAATTAAGA

Downstream 100 bases:

>100_bases
CGTGAGTTCCGGAGTAAGGAATTCGAATGATTTATTTTTCTGAAAAAGTTGGAATCTGAACTTTGCAGATCGATTCTTTA
AATGTGGGAACTACCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDQQVLELTRKAVVRATIERLRTTYSDLLVVKGYDGIPDFFEFNLYSPSNKEERDNALESLYEKLKTVAGKSMTENIHQI
ILLNRLTDSLDYDTAKVVIENNLIEDGKISRNNLYAAMGEANRFDERKTQIQMVGNTLKFFFSLSKLPMIKLVMAPIKVA
ASMVGANSLVETMEAGYELSSKIKDLNPFIDAFLDREIRLITKLETGHPVGELAN

Sequences:

>Translated_215_residues
MDQQVLELTRKAVVRATIERLRTTYSDLLVVKGYDGIPDFFEFNLYSPSNKEERDNALESLYEKLKTVAGKSMTENIHQI
ILLNRLTDSLDYDTAKVVIENNLIEDGKISRNNLYAAMGEANRFDERKTQIQMVGNTLKFFFSLSKLPMIKLVMAPIKVA
ASMVGANSLVETMEAGYELSSKIKDLNPFIDAFLDREIRLITKLETGHPVGELAN
>Mature_215_residues
MDQQVLELTRKAVVRATIERLRTTYSDLLVVKGYDGIPDFFEFNLYSPSNKEERDNALESLYEKLKTVAGKSMTENIHQI
ILLNRLTDSLDYDTAKVVIENNLIEDGKISRNNLYAAMGEANRFDERKTQIQMVGNTLKFFFSLSKLPMIKLVMAPIKVA
ASMVGANSLVETMEAGYELSSKIKDLNPFIDAFLDREIRLITKLETGHPVGELAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24329; Mature: 24329

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQVLELTRKAVVRATIERLRTTYSDLLVVKGYDGIPDFFEFNLYSPSNKEERDNALES
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEECCCCCCCCHHHHHHHHH
LYEKLKTVAGKSMTENIHQIILLNRLTDSLDYDTAKVVIENNLIEDGKISRNNLYAAMGE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCHHEEECCC
ANRFDERKTQIQMVGNTLKFFFSLSKLPMIKLVMAPIKVAASMVGANSLVETMEAGYELS
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SKIKDLNPFIDAFLDREIRLITKLETGHPVGELAN
HHHHHHHHHHHHHHCCHHHHEEEECCCCCHHCCCC
>Mature Secondary Structure
MDQQVLELTRKAVVRATIERLRTTYSDLLVVKGYDGIPDFFEFNLYSPSNKEERDNALES
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEECCCCCCCCHHHHHHHHH
LYEKLKTVAGKSMTENIHQIILLNRLTDSLDYDTAKVVIENNLIEDGKISRNNLYAAMGE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCHHEEECCC
ANRFDERKTQIQMVGNTLKFFFSLSKLPMIKLVMAPIKVAASMVGANSLVETMEAGYELS
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SKIKDLNPFIDAFLDREIRLITKLETGHPVGELAN
HHHHHHHHHHHHHHCCHHHHEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA