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The map label for this gene is yqjF [C]

Identifier: 45658867

GI number: 45658867

Start: 3712638

End: 3713081

Strand: Direct

Name: yqjF [C]

Synonym: LIC13041

Alternate gene names: 45658867

Gene position: 3712638-3713081 (Clockwise)

Preceding gene: 45658866

Following gene: 45658868

Centisome position: 86.8

GC content: 38.51

Gene sequence:

>444_bases
ATGCTTCAAAAATTTTTTAAGACGGATTCAGACTTAGGATCTTTAATCCTTAGACTAGTTGCAGGAATTGTAATATTTCC
GCACGGAGCTCAAAAACTATTAGGTTGGTTTGGAGGTTACGGATTTTCGGGAACCATGGGATATTTTATAGGACAAGGAA
TTCCTGCGCCAATCGCATTTTTAGTTATTATCGGAGAATCTCTCGGAGCACTTGGGCTTATCTTCGGTTTTCTGACAAGA
TTATCTGCTTTTGGAATCGGAATCATCATGATCGGAGCAGCTCTGATTCATTTACCAAACGGTTTGTTTATGAATTGGTT
TGGAAATCAGCAGGGAGAAGGATATGAATTTCACCTTCTTTTCATAGCAATTTCTTTGGCACTTTTGGTCAAAGGCGGAG
GAAAAGCTTCCGTAGATTCACTGATAGAAGAAAAACTAAACTAA

Upstream 100 bases:

>100_bases
ACTTTTCCTACTGAAAAAGAAATACTCAATACTTTAAATTTAAATTATTTATCATCAAAGAACAAAACTACAAACTTGGA
ATCATTTAGGAGGAAATAAA

Downstream 100 bases:

>100_bases
AAGTTGATTTCAAAAAAAACTTCTACTCGCTCTCGAAAGATTTAGATACGATTACTATAATTTTTTTCGAGAGCGGTAAA
GCGAACTGCAGACGATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane DoxD-Like Family Protein; DoxD-Like Family Protein; DoxX Subfamily; Doxx Family Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLQKFFKTDSDLGSLILRLVAGIVIFPHGAQKLLGWFGGYGFSGTMGYFIGQGIPAPIAFLVIIGESLGALGLIFGFLTR
LSAFGIGIIMIGAALIHLPNGLFMNWFGNQQGEGYEFHLLFIAISLALLVKGGGKASVDSLIEEKLN

Sequences:

>Translated_147_residues
MLQKFFKTDSDLGSLILRLVAGIVIFPHGAQKLLGWFGGYGFSGTMGYFIGQGIPAPIAFLVIIGESLGALGLIFGFLTR
LSAFGIGIIMIGAALIHLPNGLFMNWFGNQQGEGYEFHLLFIAISLALLVKGGGKASVDSLIEEKLN
>Mature_147_residues
MLQKFFKTDSDLGSLILRLVAGIVIFPHGAQKLLGWFGGYGFSGTMGYFIGQGIPAPIAFLVIIGESLGALGLIFGFLTR
LSAFGIGIIMIGAALIHLPNGLFMNWFGNQQGEGYEFHLLFIAISLALLVKGGGKASVDSLIEEKLN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15665; Mature: 15665

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKFFKTDSDLGSLILRLVAGIVIFPHGAQKLLGWFGGYGFSGTMGYFIGQGIPAPIAF
CCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHH
LVIIGESLGALGLIFGFLTRLSAFGIGIIMIGAALIHLPNGLFMNWFGNQQGEGYEFHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHH
FIAISLALLVKGGGKASVDSLIEEKLN
HHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLQKFFKTDSDLGSLILRLVAGIVIFPHGAQKLLGWFGGYGFSGTMGYFIGQGIPAPIAF
CCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHH
LVIIGESLGALGLIFGFLTRLSAFGIGIIMIGAALIHLPNGLFMNWFGNQQGEGYEFHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHH
FIAISLALLVKGGGKASVDSLIEEKLN
HHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA