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The map label for this gene is cht

Identifier: 45658860

GI number: 45658860

Start: 3699894

End: 3701174

Strand: Direct

Name: cht

Synonym: LIC13033

Alternate gene names: 45658860

Gene position: 3699894-3701174 (Clockwise)

Preceding gene: 45658856

Following gene: 45658861

Centisome position: 86.5

GC content: 34.5

Gene sequence:

>1281_bases
TTGAAAAAACTTCTTTTACTTTTTTTTATCTTTATTTTATTACTTTCGACGTGGATAGGATTGTATCTTTTCCGTATCTC
TAAAGCTAAAAGTATATCTGAGTTTATTAATTCGATATACGATTTAAAAATTGATACAAAAGAGAATGAAAAGAAATTTT
TAGCATCCACTTGGTCTTCCGATATAGTTGCAATGACACAAAATATTCATCTATATGACGAGATTCATCCCTTTCTTTAT
ACTCTGGAAGGAGGTAGAACCAATACGGGCAAGATCAAGTCCATTTGGAATCATGAAGCTCAAGAAATTTATATTTGGAC
TTTAAAAACAATTTCCCCAAAAACAAAAATCATTCCAACGATCTTTCGATGGGAAAACGATTTCGAAAAAGTTTCGGATG
CTATCGGACTCAACGGAAACGTAAAAATTCGTGACTATCATATTCAACAAATCTTAAAAGAGATCGATACTTACAATTAC
GACGGAATCGACATCGACTACGAAGGAATGACATGTGATAAAAAAGAAAGTTTCGAAATTTTTCTAACCCTCCTTTCCAA
AGAATTAAAAAAGAAAAATAAACTCTTATCAGTTGCAATTCATCCTAAAACATTCGCTGAACAACCATCAGATTATTTTT
GCAAAGAAAACGGCAAGAAGATGCAGGTTGATTTTTACGAAGCCTACAGAGGTCAACTTTCACACGACTATGAATTTCTA
GGTAAAGTCGCAGATAAGGTCAAGATCATGGCCTACGAATTACATCCAAGGAAAAATGCCTTTCCGGGTCCTGGTCCACA
AGCACCATCCTGGTGGATTGAAAGAATATTAGAATATTCTACTAAAAAAATCCCTAATTCTAAGCTATATATGGCAATTC
CAACTTATGGCTACGACTGGCCATTAAACTGCGATATTCCCTCCAAGGCAGTTTTTTATTCCCGCGCTCAATATATCAAA
ACGAATTGGAATCCGAGGATAGAAGAACCTACGGATGTAGTTCAAATTTTTAAAAACGCCAGAAAATCGGGCGATTGGAT
TTATCTTCGCCCCTATTTATATAGACACGAAGGACATGTTTATGACGATCCTTCTCTTTGGTATACTTTAGGCAACTGTG
ACCGTGTCGCTTTTTATATAAACCGAAGATCTTTCGAAACAAAAATGAATCTATTAAAAAAATATAAAATACGAGGATTT
TCATTTTGGCAACTGATCCAGGATAACGATCCGGAAATCCACGCTTACTTAAAACAAATAATCGAACATCCAGATAATTA
A

Upstream 100 bases:

>100_bases
GGTACTATCTTCATCTTTAGATAAATTCACTTTTCAGAATAGAATCCGAATTTAAACTGACCGAAAAAATTCAATCCGGA
AACGGTGTACCGAGCTCATT

Downstream 100 bases:

>100_bases
AGATTCATTTTGAAAAAATTATCTTACTACCGGGCGCATGAAAATAGTACCAAGTTATTAACGGCTGAGTTTACGAAAAA
AATAGTGGTACTTAAAAAAT

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKKLLLLFFIFILLLSTWIGLYLFRISKAKSISEFINSIYDLKIDTKENEKKFLASTWSSDIVAMTQNIHLYDEIHPFLY
TLEGGRTNTGKIKSIWNHEAQEIYIWTLKTISPKTKIIPTIFRWENDFEKVSDAIGLNGNVKIRDYHIQQILKEIDTYNY
DGIDIDYEGMTCDKKESFEIFLTLLSKELKKKNKLLSVAIHPKTFAEQPSDYFCKENGKKMQVDFYEAYRGQLSHDYEFL
GKVADKVKIMAYELHPRKNAFPGPGPQAPSWWIERILEYSTKKIPNSKLYMAIPTYGYDWPLNCDIPSKAVFYSRAQYIK
TNWNPRIEEPTDVVQIFKNARKSGDWIYLRPYLYRHEGHVYDDPSLWYTLGNCDRVAFYINRRSFETKMNLLKKYKIRGF
SFWQLIQDNDPEIHAYLKQIIEHPDN

Sequences:

>Translated_426_residues
MKKLLLLFFIFILLLSTWIGLYLFRISKAKSISEFINSIYDLKIDTKENEKKFLASTWSSDIVAMTQNIHLYDEIHPFLY
TLEGGRTNTGKIKSIWNHEAQEIYIWTLKTISPKTKIIPTIFRWENDFEKVSDAIGLNGNVKIRDYHIQQILKEIDTYNY
DGIDIDYEGMTCDKKESFEIFLTLLSKELKKKNKLLSVAIHPKTFAEQPSDYFCKENGKKMQVDFYEAYRGQLSHDYEFL
GKVADKVKIMAYELHPRKNAFPGPGPQAPSWWIERILEYSTKKIPNSKLYMAIPTYGYDWPLNCDIPSKAVFYSRAQYIK
TNWNPRIEEPTDVVQIFKNARKSGDWIYLRPYLYRHEGHVYDDPSLWYTLGNCDRVAFYINRRSFETKMNLLKKYKIRGF
SFWQLIQDNDPEIHAYLKQIIEHPDN
>Mature_426_residues
MKKLLLLFFIFILLLSTWIGLYLFRISKAKSISEFINSIYDLKIDTKENEKKFLASTWSSDIVAMTQNIHLYDEIHPFLY
TLEGGRTNTGKIKSIWNHEAQEIYIWTLKTISPKTKIIPTIFRWENDFEKVSDAIGLNGNVKIRDYHIQQILKEIDTYNY
DGIDIDYEGMTCDKKESFEIFLTLLSKELKKKNKLLSVAIHPKTFAEQPSDYFCKENGKKMQVDFYEAYRGQLSHDYEFL
GKVADKVKIMAYELHPRKNAFPGPGPQAPSWWIERILEYSTKKIPNSKLYMAIPTYGYDWPLNCDIPSKAVFYSRAQYIK
TNWNPRIEEPTDVVQIFKNARKSGDWIYLRPYLYRHEGHVYDDPSLWYTLGNCDRVAFYINRRSFETKMNLLKKYKIRGF
SFWQLIQDNDPEIHAYLKQIIEHPDN

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00704 Glyco_hydro_18 [H]

EC number: NA

Molecular weight: Translated: 50469; Mature: 50469

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLLFFIFILLLSTWIGLYLFRISKAKSISEFINSIYDLKIDTKENEKKFLASTWSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCC
DIVAMTQNIHLYDEIHPFLYTLEGGRTNTGKIKSIWNHEAQEIYIWTLKTISPKTKIIPT
CEEEEECCEEEHCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCHH
IFRWENDFEKVSDAIGLNGNVKIRDYHIQQILKEIDTYNYDGIDIDYEGMTCDKKESFEI
HHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHH
FLTLLSKELKKKNKLLSVAIHPKTFAEQPSDYFCKENGKKMQVDFYEAYRGQLSHDYEFL
HHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHCCCCEEEEEHHHHHCCCCCCCHHHH
GKVADKVKIMAYELHPRKNAFPGPGPQAPSWWIERILEYSTKKIPNSKLYMAIPTYGYDW
HHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PLNCDIPSKAVFYSRAQYIKTNWNPRIEEPTDVVQIFKNARKSGDWIYLRPYLYRHEGHV
CCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEEEECCCCE
YDDPSLWYTLGNCDRVAFYINRRSFETKMNLLKKYKIRGFSFWQLIQDNDPEIHAYLKQI
ECCCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
IEHPDN
HHCCCC
>Mature Secondary Structure
MKKLLLLFFIFILLLSTWIGLYLFRISKAKSISEFINSIYDLKIDTKENEKKFLASTWSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCC
DIVAMTQNIHLYDEIHPFLYTLEGGRTNTGKIKSIWNHEAQEIYIWTLKTISPKTKIIPT
CEEEEECCEEEHCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCHH
IFRWENDFEKVSDAIGLNGNVKIRDYHIQQILKEIDTYNYDGIDIDYEGMTCDKKESFEI
HHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHH
FLTLLSKELKKKNKLLSVAIHPKTFAEQPSDYFCKENGKKMQVDFYEAYRGQLSHDYEFL
HHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHCCCCEEEEEHHHHHCCCCCCCHHHH
GKVADKVKIMAYELHPRKNAFPGPGPQAPSWWIERILEYSTKKIPNSKLYMAIPTYGYDW
HHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PLNCDIPSKAVFYSRAQYIKTNWNPRIEEPTDVVQIFKNARKSGDWIYLRPYLYRHEGHV
CCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEEEECCCCE
YDDPSLWYTLGNCDRVAFYINRRSFETKMNLLKKYKIRGFSFWQLIQDNDPEIHAYLKQI
ECCCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
IEHPDN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]