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The map label for this gene is 45658827

Identifier: 45658827

GI number: 45658827

Start: 3647411

End: 3648292

Strand: Reverse

Name: 45658827

Synonym: LIC13000

Alternate gene names: NA

Gene position: 3648292-3647411 (Counterclockwise)

Preceding gene: 45658828

Following gene: 45658826

Centisome position: 85.3

GC content: 35.94

Gene sequence:

>882_bases
TTGTCGAGTTCTAACTTTGGGAAATTTAGTAAAATGTTTTTTGGGAAAAATATAGTTATAGGGCCTAAGTATTTTTTAGG
CGCTGGGGCATTGTTCGGCTTTTTACTCGCTCTTATCGGTTTATTGTTTCCAGAAAGGGAAATTTTACTTTCCGATACGG
TTGCGGAAGTAAACGGAAATTATATTAAAAAAGATGAATATTTTAGAACGTTAACTGCTCTTTCTTCCGATAGCAAAAAT
CCGATTACGGAAGAAGCTCGCGCCAACGTATTGGAGCGACTGATAGAAGAGGAATTATTGGTACAAAGGGGATTGGAGTT
AGGTTTTGCAAGAGAAGATCGTTTGATCAGGGCTTCTATCGTGAGAGCTGTCATTCAATCCATCATTTCGGAAAATGTTT
CTGAAAAACCGAACGTTTTAGAACTTAGGTCTTATTTTTTATTAAACCGAGATAAATTTTTAAAAACGTCTCGTTATCAA
GTGATGGTTTATCAACAATCAGATGAAGTTTCCGCCACTCGGATTTCAAAAGAACTCAGAGAAGCCGGACGAACAATGGC
ACCTAATGTATATTATATTCCAAATACATTATTACCTTTGCGTAAACTTTTGGATTATTTAGGTCCGGATGTGGTTTTGG
CTTTGGGAAATTTAAAATCCGGAGAAGTATCTGATCCGATAAAATCGGGAGAAAAATTTTTTGTAGTCAAGGTATTTGTT
TTGGAGCCAGGTTCTACGCCTGATTTTGATTCCGTAAAGAAAGAAGTGGAAGCGTCTTACATTCAGGAAAAGGGTGACAG
GACTTTAAGAGAATATTTAGACAAGTTAAAGGCAAAATCTAAAATAAAAAAAGCCTACCTAGTTCAGAGTAATAAAATAT
GA

Upstream 100 bases:

>100_bases
GGCGGACGTAGAAGAGCGGGCTTGGTCTTCTCCAATTTATCTAACTCAGCCGAAACAAAAATGAATTTGTTCTAAATCGG
CTAGATTCTGACAACTATGA

Downstream 100 bases:

>100_bases
AGAAAATAATTTATTTTATTATTATATTATTTTTTTCAAATGAAATTTTTTCTCACAATAGGAGTGAGTCTTTTTCGGTT
TGGAAGATAGATAAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSSSNFGKFSKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGNYIKKDEYFRTLTALSSDSKN
PITEEARANVLERLIEEELLVQRGLELGFAREDRLIRASIVRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQ
VMVYQQSDEVSATRISKELREAGRTMAPNVYYIPNTLLPLRKLLDYLGPDVVLALGNLKSGEVSDPIKSGEKFFVVKVFV
LEPGSTPDFDSVKKEVEASYIQEKGDRTLREYLDKLKAKSKIKKAYLVQSNKI

Sequences:

>Translated_293_residues
MSSSNFGKFSKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGNYIKKDEYFRTLTALSSDSKN
PITEEARANVLERLIEEELLVQRGLELGFAREDRLIRASIVRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQ
VMVYQQSDEVSATRISKELREAGRTMAPNVYYIPNTLLPLRKLLDYLGPDVVLALGNLKSGEVSDPIKSGEKFFVVKVFV
LEPGSTPDFDSVKKEVEASYIQEKGDRTLREYLDKLKAKSKIKKAYLVQSNKI
>Mature_292_residues
SSSNFGKFSKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGNYIKKDEYFRTLTALSSDSKNP
ITEEARANVLERLIEEELLVQRGLELGFAREDRLIRASIVRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQV
MVYQQSDEVSATRISKELREAGRTMAPNVYYIPNTLLPLRKLLDYLGPDVVLALGNLKSGEVSDPIKSGEKFFVVKVFVL
EPGSTPDFDSVKKEVEASYIQEKGDRTLREYLDKLKAKSKIKKAYLVQSNKI

Specific function: Unknown

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33156; Mature: 33025

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNFGKFSKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGN
CCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
YIKKDEYFRTLTALSSDSKNPITEEARANVLERLIEEELLVQRGLELGFAREDRLIRASI
EECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHH
VRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQVMVYQQSDEVSATRISKELR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
EAGRTMAPNVYYIPNTLLPLRKLLDYLGPDVVLALGNLKSGEVSDPIKSGEKFFVVKVFV
HCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEEEEEEEEE
LEPGSTPDFDSVKKEVEASYIQEKGDRTLREYLDKLKAKSKIKKAYLVQSNKI
ECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSSNFGKFSKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGN
CCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
YIKKDEYFRTLTALSSDSKNPITEEARANVLERLIEEELLVQRGLELGFAREDRLIRASI
EECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHH
VRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQVMVYQQSDEVSATRISKELR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
EAGRTMAPNVYYIPNTLLPLRKLLDYLGPDVVLALGNLKSGEVSDPIKSGEKFFVVKVFV
HCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEEEEEEEEE
LEPGSTPDFDSVKKEVEASYIQEKGDRTLREYLDKLKAKSKIKKAYLVQSNKI
ECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA