Click here to switch to the map view.

The map label for this gene is 45658801

Identifier: 45658801

GI number: 45658801

Start: 3611773

End: 3612336

Strand: Reverse

Name: 45658801

Synonym: LIC12974

Alternate gene names: NA

Gene position: 3612336-3611773 (Counterclockwise)

Preceding gene: 45658803

Following gene: 45658798

Centisome position: 84.46

GC content: 40.78

Gene sequence:

>564_bases
TTGCCAATGGCAATAAACGCAGGGATCTTCTGCATGATCGAAAAACGAATCAACAAATTCGGGGAGAACGGAACCTTCGC
AACGAAGGACATCCCCAAGGGAACCTTGCTGTTCAGTTACAGTGAGTGGATCGAAGACGAAGAATTTGGATGGAAAGTTC
TAACGGTCGAAGAAGCCGAGTCGCTTCCCGATTCTGAAAAGGACATCTTCATGAAGTACGGATATGATGTAGACTTCGGT
TTAGTGACCGGACCTACTAGTGATCAATATGTGATCAATCATTCTAATTTCATGAATCATTCCTGTGATCCAAATATGTG
GTATGACCAAGACGATAACATTGTAGCTAAAAGGGACATTCGGGCCGGAGAAGAACTTACCATCGATTATGCGAATTTCA
TCGTAAACTTCGACCAAACTTTCGAGTGCGGCTGTGGATCGGTAAACTGTAGAAAGTTTATTCGAAAAGATGATTGGAAA
CTTCTAATCAACGAATATCAGATGAACTTCCCTAAATTCATCCAAAAAGAAATCAAAAAACTTTACGTCAAAATTCCGGT
ATAA

Upstream 100 bases:

>100_bases
TGGAATGAAATTGAGGTCGGCGGGAAGTTGCATTAAATATTACTCGAATTTAGTATTTTAATTGAAGTTTTTTTTATACC
ATTCTTGATAGATAAAAATT

Downstream 100 bases:

>100_bases
AAACCCAAACGAAAATATTACTTTCTAATTTTTAGGATTTTTTCCAGGATTCCTCTTCTGAGAAGTCCTGGAGAATCTTC
GAATGTGGTCGTATTGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPMAINAGIFCMIEKRINKFGENGTFATKDIPKGTLLFSYSEWIEDEEFGWKVLTVEEAESLPDSEKDIFMKYGYDVDFG
LVTGPTSDQYVINHSNFMNHSCDPNMWYDQDDNIVAKRDIRAGEELTIDYANFIVNFDQTFECGCGSVNCRKFIRKDDWK
LLINEYQMNFPKFIQKEIKKLYVKIPV

Sequences:

>Translated_187_residues
MPMAINAGIFCMIEKRINKFGENGTFATKDIPKGTLLFSYSEWIEDEEFGWKVLTVEEAESLPDSEKDIFMKYGYDVDFG
LVTGPTSDQYVINHSNFMNHSCDPNMWYDQDDNIVAKRDIRAGEELTIDYANFIVNFDQTFECGCGSVNCRKFIRKDDWK
LLINEYQMNFPKFIQKEIKKLYVKIPV
>Mature_186_residues
PMAINAGIFCMIEKRINKFGENGTFATKDIPKGTLLFSYSEWIEDEEFGWKVLTVEEAESLPDSEKDIFMKYGYDVDFGL
VTGPTSDQYVINHSNFMNHSCDPNMWYDQDDNIVAKRDIRAGEELTIDYANFIVNFDQTFECGCGSVNCRKFIRKDDWKL
LINEYQMNFPKFIQKEIKKLYVKIPV

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21815; Mature: 21684

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMAINAGIFCMIEKRINKFGENGTFATKDIPKGTLLFSYSEWIEDEEFGWKVLTVEEAE
CCEEECCCEEEEEEHHHHHCCCCCCEEECCCCCCEEEEEHHHHCCCCCCCEEEEEEECHH
SLPDSEKDIFMKYGYDVDFGLVTGPTSDQYVINHSNFMNHSCDPNMWYDQDDNIVAKRDI
CCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCC
RAGEELTIDYANFIVNFDQTFECGCGSVNCRKFIRKDDWKLLINEYQMNFPKFIQKEIKK
CCCCEEEEEEHHEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEHHCCCCHHHHHHHHHH
LYVKIPV
HEEEECC
>Mature Secondary Structure 
PMAINAGIFCMIEKRINKFGENGTFATKDIPKGTLLFSYSEWIEDEEFGWKVLTVEEAE
CEEECCCEEEEEEHHHHHCCCCCCEEECCCCCCEEEEEHHHHCCCCCCCEEEEEEECHH
SLPDSEKDIFMKYGYDVDFGLVTGPTSDQYVINHSNFMNHSCDPNMWYDQDDNIVAKRDI
CCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCC
RAGEELTIDYANFIVNFDQTFECGCGSVNCRKFIRKDDWKLLINEYQMNFPKFIQKEIKK
CCCCEEEEEEHHEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEHHCCCCHHHHHHHHHH
LYVKIPV
HEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA