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The map label for this gene is 45658800

Identifier: 45658800

GI number: 45658800

Start: 3611147

End: 3611755

Strand: Direct

Name: 45658800

Synonym: LIC12973

Alternate gene names: NA

Gene position: 3611147-3611755 (Clockwise)

Preceding gene: 45658799

Following gene: 45658802

Centisome position: 84.43

GC content: 38.42

Gene sequence:

>609_bases
TTGTATTGTATGGAATTTAGCTTTCCTTTACCAGGAAATCCCATCTTTGATTACGTTCTATTGCCTTGTTTTATTTTTTT
ATCTAGAGTCACAGACGTATCCATCGGAACAATTCGAGTTATACTTCTTACAAGAGAAAAAAAAGGAATCGCAGCCTCTT
TAGGATTTCTAGAGGTTCTACTTTGGGTCGTAGTAATCACCCAAGTCATCAAAAATCTAAACAACGTATTTTGTTATCTC
GCCTATGCAGGTGGTTTTGCAACGGGCACTTTTATCGGAATGATTTTAGAAGAAAAGTTGGCGATCGGATTTTCACTTCT
GAGGATCATATCTCCGCAAAACGGAAGTGAAATCGCAGACAAACTTTCCGAAGCAGGTTATAGAGTAACTATAATGAACG
GACATGGCAGCCGAGGTCCGGTCAAAATCGTTTTTACGGTTTTAAAAAGAAAAAAAATCGATCAGGCAATGAAGATCGTT
CAAAACGTGGAACCGGACGTATTTTATTCGATAGAAAACGCCCGAAGGACCAATACGACCACATTCGAAGATTCTCCAGG
ACTTCTCAGAAGAGGAATCCTGGAAAAAATCCTAAAAATTAGAAAGTAA

Upstream 100 bases:

>100_bases
ACTACTTTGATCGGAAACGTGAGTAATCGGTATTATTTCGGAAAGTTATAAATTTTAAAACTCTTCTTCTCCTCGACGGG
AATTGTTCTTTCAAAGATAT

Downstream 100 bases:

>100_bases
TATTTTCGTTTGGGTTTTTATACCGGAATTTTGACGTAAAGTTTTTTGATTTCTTTTTGGATGAATTTAGGGAAGTTCAT
CTGATATTCGTTGATTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MYCMEFSFPLPGNPIFDYVLLPCFIFLSRVTDVSIGTIRVILLTREKKGIAASLGFLEVLLWVVVITQVIKNLNNVFCYL
AYAGGFATGTFIGMILEEKLAIGFSLLRIISPQNGSEIADKLSEAGYRVTIMNGHGSRGPVKIVFTVLKRKKIDQAMKIV
QNVEPDVFYSIENARRTNTTTFEDSPGLLRRGILEKILKIRK

Sequences:

>Translated_202_residues
MYCMEFSFPLPGNPIFDYVLLPCFIFLSRVTDVSIGTIRVILLTREKKGIAASLGFLEVLLWVVVITQVIKNLNNVFCYL
AYAGGFATGTFIGMILEEKLAIGFSLLRIISPQNGSEIADKLSEAGYRVTIMNGHGSRGPVKIVFTVLKRKKIDQAMKIV
QNVEPDVFYSIENARRTNTTTFEDSPGLLRRGILEKILKIRK
>Mature_202_residues
MYCMEFSFPLPGNPIFDYVLLPCFIFLSRVTDVSIGTIRVILLTREKKGIAASLGFLEVLLWVVVITQVIKNLNNVFCYL
AYAGGFATGTFIGMILEEKLAIGFSLLRIISPQNGSEIADKLSEAGYRVTIMNGHGSRGPVKIVFTVLKRKKIDQAMKIV
QNVEPDVFYSIENARRTNTTTFEDSPGLLRRGILEKILKIRK

Specific function: Unknown

COG id: COG4843

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0316 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019264
- InterPro:   IPR022930 [H]

Pfam domain/function: PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 22626; Mature: 22626

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCMEFSFPLPGNPIFDYVLLPCFIFLSRVTDVSIGTIRVILLTREKKGIAASLGFLEVL
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
LWVVVITQVIKNLNNVFCYLAYAGGFATGTFIGMILEEKLAIGFSLLRIISPQNGSEIAD
HHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLSEAGYRVTIMNGHGSRGPVKIVFTVLKRKKIDQAMKIVQNVEPDVFYSIENARRTNTT
HHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
TFEDSPGLLRRGILEKILKIRK
CCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYCMEFSFPLPGNPIFDYVLLPCFIFLSRVTDVSIGTIRVILLTREKKGIAASLGFLEVL
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
LWVVVITQVIKNLNNVFCYLAYAGGFATGTFIGMILEEKLAIGFSLLRIISPQNGSEIAD
HHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLSEAGYRVTIMNGHGSRGPVKIVFTVLKRKKIDQAMKIVQNVEPDVFYSIENARRTNTT
HHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
TFEDSPGLLRRGILEKILKIRK
CCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA