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The map label for this gene is 45658784

Identifier: 45658784

GI number: 45658784

Start: 3589319

End: 3590479

Strand: Reverse

Name: 45658784

Synonym: LIC12957

Alternate gene names: NA

Gene position: 3590479-3589319 (Counterclockwise)

Preceding gene: 45658785

Following gene: 45658783

Centisome position: 83.94

GC content: 37.12

Gene sequence:

>1161_bases
TTGAAGCCCTCCGCTTTTACCCTCAAACCAGGATTGGTCCACGGAAAATTTTCTCGTAAAACCGTCCTGGAAGAACCATT
CACATTATTTCCCGAATCGGGAGCCCTCTATTTAAAAGAATTTCCCACTCGAGTATTTGCAGGAGAACCACTCGTTAGGC
AGTCTGTCGGAACACTTTTGTCTCCTGTCGATGGAATTGCGAGTCTCATTCAGGGAGAACATTCCACAAAGATTCGAATC
GTACAAGACGGAAGTTTTCAATTATCCAGTGAAACCAGAATTGATTCTTCTTTGAAATTAGACCAAGCCTTACAGAGAAT
GGACGAACTCGGACTTGTCTCTCTCGATTTTTCGAATACAACTTTATCTTCTCTTTTTAAAACGTTTTGCTCCACTTTGA
TTGTACTTTCCCCATATACTAAAACCCAGTCGGTCGATTTTCAAAAAATTCTTTTAGAAGAATGCAGAGAACTGCATATT
CGATTTTTAGAATATTTGAAAGTATGGTTTCCGGAAGCTTCCGTTAAAGATTATATACTGTTTCCGGTACCTTTTCGAAA
ATACGAATACCCACTAGGATACCCGCAGTATTTTGTAAAAAAGGCTTTGTCTGAAAATGTATTCCAAAAGGAAAAAATTC
TTTATCTCGGACCCGAAACTCTTTATCATCTCTACAGAGCCTTATTCAAAAAAATTCCATATATAGAAAGGAATATTACG
ATTTATTATGTGGGAAAAAATGGCGGTCTTAAAAAAGAGGAATCTCCGATTAAGCTCAGAGACGGCCAAAGTCTTGGCTT
TTTACTTTCTGAAAAAAAGAAAGAGTATCCTAACTTCACTTTCAATTCCTTTTTTGACGGGGGGGAATTTCATTCTTCAT
CCGAGGAATATTTCTTAGATATTTATAAACATCATTCTATTATATTCGTTTCTGGTAAAATTCAGGAGCGGAATGAACTT
CCTTGTATCGAATGTGGAGAATGCACTTATAATTGTCCTTTAGAATGTAATCCTATTTCTCTTGTTAATGGACAGGGAAA
ATTTTTTGCAGACGCTTGTATCGAATGCGGGATCTGTACTTACCTTTGCCCTTCTGGAATTTCTATCAGAAATAAAATCC
GAGAAGTAAAAAGTAGAACCCAGGAAAATCGAAATGCCTGA

Upstream 100 bases:

>100_bases
TGAGCCTATGGGTGAAATTCTTCCTTATATTAAAAATCTAAAGAAAGAACTTCCAATCAAAGACGAAATCTACATGGTGA
AAAATCTCACCTAAAGAGTT

Downstream 100 bases:

>100_bases
TTATCTTTTAGTTACTAAAATCGGTTTTTTTCGAAAGTCGGATCCGTTTTATCCGGATATTTTGATGGGACTTTTTTTGT
TTATAGGAATTGTCTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase-Like Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVFAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSSETRIDSSLKLDQALQRMDELGLVSLDFSNTTLSSLFKTFCSTLIVLSPYTKTQSVDFQKILLEECRELHI
RFLEYLKVWFPEASVKDYILFPVPFRKYEYPLGYPQYFVKKALSENVFQKEKILYLGPETLYHLYRALFKKIPYIERNIT
IYYVGKNGGLKKEESPIKLRDGQSLGFLLSEKKKEYPNFTFNSFFDGGEFHSSSEEYFLDIYKHHSIIFVSGKIQERNEL
PCIECGECTYNCPLECNPISLVNGQGKFFADACIECGICTYLCPSGISIRNKIREVKSRTQENRNA

Sequences:

>Translated_386_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVFAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSSETRIDSSLKLDQALQRMDELGLVSLDFSNTTLSSLFKTFCSTLIVLSPYTKTQSVDFQKILLEECRELHI
RFLEYLKVWFPEASVKDYILFPVPFRKYEYPLGYPQYFVKKALSENVFQKEKILYLGPETLYHLYRALFKKIPYIERNIT
IYYVGKNGGLKKEESPIKLRDGQSLGFLLSEKKKEYPNFTFNSFFDGGEFHSSSEEYFLDIYKHHSIIFVSGKIQERNEL
PCIECGECTYNCPLECNPISLVNGQGKFFADACIECGICTYLCPSGISIRNKIREVKSRTQENRNA
>Mature_386_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVFAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSSETRIDSSLKLDQALQRMDELGLVSLDFSNTTLSSLFKTFCSTLIVLSPYTKTQSVDFQKILLEECRELHI
RFLEYLKVWFPEASVKDYILFPVPFRKYEYPLGYPQYFVKKALSENVFQKEKILYLGPETLYHLYRALFKKIPYIERNIT
IYYVGKNGGLKKEESPIKLRDGQSLGFLLSEKKKEYPNFTFNSFFDGGEFHSSSEEYFLDIYKHHSIIFVSGKIQERNEL
PCIECGECTYNCPLECNPISLVNGQGKFFADACIECGICTYLCPSGISIRNKIREVKSRTQENRNA

Specific function: Unknown

COG id: COG4656

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44207; Mature: 44207

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVFAGEPLVRQSVGTLL
CCCCCEEECCCCEECCCCCHHHHCCCCEECCCCCCCHHHHCCCHHHCCCCHHHHHHHHHH
SPVDGIASLIQGEHSTKIRIVQDGSFQLSSETRIDSSLKLDQALQRMDELGLVSLDFSNT
CCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCH
TLSSLFKTFCSTLIVLSPYTKTQSVDFQKILLEECRELHIRFLEYLKVWFPEASVKDYIL
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
FPVPFRKYEYPLGYPQYFVKKALSENVFQKEKILYLGPETLYHLYRALFKKIPYIERNIT
ECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCEECCEE
IYYVGKNGGLKKEESPIKLRDGQSLGFLLSEKKKEYPNFTFNSFFDGGEFHSSSEEYFLD
EEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHE
IYKHHSIIFVSGKIQERNELPCIECGECTYNCPLECNPISLVNGQGKFFADACIECGICT
EECCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCHHH
YLCPSGISIRNKIREVKSRTQENRNA
HHCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVFAGEPLVRQSVGTLL
CCCCCEEECCCCEECCCCCHHHHCCCCEECCCCCCCHHHHCCCHHHCCCCHHHHHHHHHH
SPVDGIASLIQGEHSTKIRIVQDGSFQLSSETRIDSSLKLDQALQRMDELGLVSLDFSNT
CCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCH
TLSSLFKTFCSTLIVLSPYTKTQSVDFQKILLEECRELHIRFLEYLKVWFPEASVKDYIL
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
FPVPFRKYEYPLGYPQYFVKKALSENVFQKEKILYLGPETLYHLYRALFKKIPYIERNIT
ECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCEECCEE
IYYVGKNGGLKKEESPIKLRDGQSLGFLLSEKKKEYPNFTFNSFFDGGEFHSSSEEYFLD
EEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHE
IYKHHSIIFVSGKIQERNELPCIECGECTYNCPLECNPISLVNGQGKFFADACIECGICT
EECCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCHHH
YLCPSGISIRNKIREVKSRTQENRNA
HHCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA