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The map label for this gene is 45658766

Identifier: 45658766

GI number: 45658766

Start: 3568247

End: 3568762

Strand: Direct

Name: 45658766

Synonym: LIC12938

Alternate gene names: NA

Gene position: 3568247-3568762 (Clockwise)

Preceding gene: 45658765

Following gene: 45658773

Centisome position: 83.43

GC content: 42.25

Gene sequence:

>516_bases
TTGAATTTTAATCTTTCAGGTAGTTATATTTTGCGTGGGAGTTCCCACATTTTGCAGATGAACTTAAATCTTCGCGGGAG
TTCCCACATTTTACAGATGAACCTCAATCTTCGCGGGAGTTCCCACATTTTACAGATGAACCTCAATCTTCGCGGGAGTT
CCCACATTTTGCAGATGAACTCAAATCTTCGCGGGAGTTCCCACATTTTGCAGATGAACTCAAATCTTCGCGGGAGTTCC
CACATTTTGCAGATGAACTCAAATCTTCGCGGGAGTTCCCACATTTTGCAGATGAACTCAAATCTTCGCGGGAGTTCCCA
CATTTTGCAGATGAACTTAAATCTTCGCGGGAGTTCCCACATTTTGCAGATGAACTCAAATCTTCGCGGGAGTTCCCACA
TTTTGCAGATGAACTTAAATCTTCGCGGGAGTTCCCACATTTTTAAGTCTTGGGCATTTGATAAAGAAAATCAAATTTCT
GCACAAAATCGTCGTTCTACGATCGTCTTTACATAA

Upstream 100 bases:

>100_bases
TATGAAACCTGCAATCGAGAAAGTCTTCAAAGTCGCCGGTTTGACTTCCTACTTTAAAACAATTAGTCCCTCAGAATTCA
GTTCCAATTACCCTTAATGA

Downstream 100 bases:

>100_bases
AAAACGGCAGCATAAGAAATTTTCCTGAAAAAAAATCTGAACTTTGCAGATCAATTTCTAAAATGTGGGAACTACCGCAA
ATTACGATTTTATGAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNFNLSGSYILRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNSNLRGSS
HILQMNSNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHIFKSWAFDKENQIS
AQNRRSTIVFT

Sequences:

>Translated_171_residues
MNFNLSGSYILRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNSNLRGSS
HILQMNSNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHIFKSWAFDKENQIS
AQNRRSTIVFT
>Mature_171_residues
MNFNLSGSYILRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNSNLRGSS
HILQMNSNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSHIFKSWAFDKENQIS
AQNRRSTIVFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19269; Mature: 19269

Theoretical pI: Translated: 12.86; Mature: 12.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNLSGSYILRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMN
CCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEC
SNLRGSSHILQMNSNLRGSSHILQMNSNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSH
CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCE
ILQMNSNLRGSSHILQMNLNLRGSSHIFKSWAFDKENQISAQNRRSTIVFT
EEEECCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNFNLSGSYILRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMNLNLRGSSHILQMN
CCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEC
SNLRGSSHILQMNSNLRGSSHILQMNSNLRGSSHILQMNSNLRGSSHILQMNLNLRGSSH
CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCE
ILQMNSNLRGSSHILQMNLNLRGSSHIFKSWAFDKENQISAQNRRSTIVFT
EEEECCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA