| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is yehQ [H]
Identifier: 45658735
GI number: 45658735
Start: 3525532
End: 3527466
Strand: Direct
Name: yehQ [H]
Synonym: LIC12905
Alternate gene names: 45658735
Gene position: 3525532-3527466 (Clockwise)
Preceding gene: 45658734
Following gene: 45658737
Centisome position: 82.43
GC content: 35.25
Gene sequence:
>1935_bases ATGCGTCAAGACATTCTCTCCTTATCCCTACAAGAATTAGAAGTTCTAACGAGCAAAGGAACGGTCAACCGAGCCTTAAA GGATATAGAATCCGGAGCCAAAGGTAAATGGAAAGAAACCGAAGACGGCAACGTTGAAGTCGTTTGGGAAGATTCAGTTA TATGTGTTTTACCCGGTTCCGTTCCAATTCAAGAGTCAAGTTGCACTTGTTCTTCTACGGGAGTTTGTAGACATATAATA CGAACGATTGTCGCTTATCAAAAACGAAATATTTCAGACAAACCAAACCTCTCTTGGAATCCAGGAAGTATTAGCGATGA AAGTTTGCGTTCTTTTATTTCTGCTTCTTCGTTTACAAAAGCCAAATCCATTTTTAATTCCGGCATTGCCGTTGAACTGG ATAGAACAGATGTTCCGGTTGCAAAAATTCACGGACTTGGAACCGTTCACTTTCCTGTCCCAAACGATATTCGATATGCT CGTGCAGATTGCAAAGGATCACTTGGTGAACAAATAATCGCTATCGCAGTATGGTCATTTCGTCTAACGCATTTAAAAAA AGAATTTGTTTCCACCAATATTCGAGAAACAAAAATTTCATCACATATAACGGATAGAGCCAATACAATTTTGAAAGAAA TTATACAATACGGATTTCAAGGAGTTTCCGAACATTTAAAAGATAGATTGTTTCAATTGAAACGTTCCTGTTTAGAAGAA GGACTCTTATGGCCCTCGGAAATTTTATCTGGATTACAAGAAGAATATTCAAAATATCTTTTACATGATTCTTTGTTCGA TCCGGATCAAGTTGTATATCTTTTAGGAGAATGGATCATACGAATGGACGCGTTAAAAGAAAATAAAGGCGCCATTCCTT CTTTAGTCATAAGCGGAGATACAAAAACGTATTCTTCCGAATTGATTGTTAGAAGTTTGATAGGATTGGGTTCTGGAATC AAAGTTTTACAAAAAGGTTTTGTAGTCCTTTCTTATTTTGCCGATCCTAAGTCCGATAAAATACTGTTATACGAATGTTC TTTCGAAAAGCATACGGAGGAACCGTTCCACTCAATCGGCAATTTTACCGTATTCAAGGGAATTCCACTTCACAATTTCG GGAAAAGTTCAATTGTCAGCTCTTCGATCAAAAAAACTACATCCGGTAAATTACAATTCAGTAATAAATTAACTTTAAAT CCTCAAACATTTTTTTTTGAATCTCTAAGTGAAAGCATTCTTTCTAACAATTTTAACGAAACGATAAAAATACTTTTAGA AAAACCTCCTCGTCCTTTAGGCCCTCGTTGGGCGGCTGGTAATTTTTTCGTATTTAAAGTAGAACGTTTTACTCAACCTC ATTTTGATAACATTTTACAACAAATAAATATAGAATTGGAAGATCAAAATGGAAACATCGCATACGTTCAGTTACCATAT TATACCAGAGCATCAGACGGTATAGAAAATCTAAAACACGCGTTAGGCGATTCTCATTTACGTTACGTATGCGGAGTTGC AAACGTAGCTTCTGGTAGACTTTACATAAAACCGGTGTCATTTGTAATCGAACAAGGAGGTAATCGTACAATGTTACAAC CTTACTTAGATTCAAAATCCCATTCCGACAAATCTAATTTTCAAACGCAAAATCAAGTTCGTTCGGAAACAGATTCTCTA AACAACTATATTACAGAATTAAGAACTACTATCTCCGAAGTATGCCTAATAGGTCTAAAACAATATGGAAAAATCAACCA TTGGAAAAAACTAGTTCAACAATCCGAAAATCTAGGATTAAAAAAAATTTCAACTCTTTTAGAATCCATAATTGCATCAA TACAATCTTCCAAAGATCCTAACGTTTCTCCCATTTTGATTTTGACTGCTCTACTTTGTCTTTCTAAAGAAATGGAACTT TTATCTCAAAAGTAA
Upstream 100 bases:
>100_bases GAAATGGCAGAGAAACTCGTTAAAGTGGGAGCAGAAATAGCCGCGATGACTCCTGGGGAACTCGCCAATTGGGTGAGCGA AAAAATCAAGTAAGAATACA
Downstream 100 bases:
>100_bases GTTCTGCAATTTATATAAGCTTTAGAAATCAAACATCGCCCTTTCAAGGGCGATGTTTTTGAAAAACTTACTGTTCTACA CAGAGAAGATTTAGATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGSVPIQESSCTCSSTGVCRHII RTIVAYQKRNISDKPNLSWNPGSISDESLRSFISASSFTKAKSIFNSGIAVELDRTDVPVAKIHGLGTVHFPVPNDIRYA RADCKGSLGEQIIAIAVWSFRLTHLKKEFVSTNIRETKISSHITDRANTILKEIIQYGFQGVSEHLKDRLFQLKRSCLEE GLLWPSEILSGLQEEYSKYLLHDSLFDPDQVVYLLGEWIIRMDALKENKGAIPSLVISGDTKTYSSELIVRSLIGLGSGI KVLQKGFVVLSYFADPKSDKILLYECSFEKHTEEPFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKTTSGKLQFSNKLTLN PQTFFFESLSESILSNNFNETIKILLEKPPRPLGPRWAAGNFFVFKVERFTQPHFDNILQQINIELEDQNGNIAYVQLPY YTRASDGIENLKHALGDSHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQPYLDSKSHSDKSNFQTQNQVRSETDSL NNYITELRTTISEVCLIGLKQYGKINHWKKLVQQSENLGLKKISTLLESIIASIQSSKDPNVSPILILTALLCLSKEMEL LSQK
Sequences:
>Translated_644_residues MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGSVPIQESSCTCSSTGVCRHII RTIVAYQKRNISDKPNLSWNPGSISDESLRSFISASSFTKAKSIFNSGIAVELDRTDVPVAKIHGLGTVHFPVPNDIRYA RADCKGSLGEQIIAIAVWSFRLTHLKKEFVSTNIRETKISSHITDRANTILKEIIQYGFQGVSEHLKDRLFQLKRSCLEE GLLWPSEILSGLQEEYSKYLLHDSLFDPDQVVYLLGEWIIRMDALKENKGAIPSLVISGDTKTYSSELIVRSLIGLGSGI KVLQKGFVVLSYFADPKSDKILLYECSFEKHTEEPFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKTTSGKLQFSNKLTLN PQTFFFESLSESILSNNFNETIKILLEKPPRPLGPRWAAGNFFVFKVERFTQPHFDNILQQINIELEDQNGNIAYVQLPY YTRASDGIENLKHALGDSHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQPYLDSKSHSDKSNFQTQNQVRSETDSL NNYITELRTTISEVCLIGLKQYGKINHWKKLVQQSENLGLKKISTLLESIIASIQSSKDPNVSPILILTALLCLSKEMEL LSQK >Mature_644_residues MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGSVPIQESSCTCSSTGVCRHII RTIVAYQKRNISDKPNLSWNPGSISDESLRSFISASSFTKAKSIFNSGIAVELDRTDVPVAKIHGLGTVHFPVPNDIRYA RADCKGSLGEQIIAIAVWSFRLTHLKKEFVSTNIRETKISSHITDRANTILKEIIQYGFQGVSEHLKDRLFQLKRSCLEE GLLWPSEILSGLQEEYSKYLLHDSLFDPDQVVYLLGEWIIRMDALKENKGAIPSLVISGDTKTYSSELIVRSLIGLGSGI KVLQKGFVVLSYFADPKSDKILLYECSFEKHTEEPFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKTTSGKLQFSNKLTLN PQTFFFESLSESILSNNFNETIKILLEKPPRPLGPRWAAGNFFVFKVERFTQPHFDNILQQINIELEDQNGNIAYVQLPY YTRASDGIENLKHALGDSHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQPYLDSKSHSDKSNFQTQNQVRSETDSL NNYITELRTTISEVCLIGLKQYGKINHWKKLVQQSENLGLKKISTLLESIIASIQSSKDPNVSPILILTALLCLSKEMEL LSQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SWIM-type zinc fingers [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007527 [H]
Pfam domain/function: PF04434 SWIM [H]
EC number: NA
Molecular weight: Translated: 72164; Mature: 72164
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGS CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEECCC VPIQESSCTCSSTGVCRHIIRTIVAYQKRNISDKPNLSWNPGSISDESLRSFISASSFTK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AKSIFNSGIAVELDRTDVPVAKIHGLGTVHFPVPNDIRYARADCKGSLGEQIIAIAVWSF HHHHHCCCCEEEECCCCCCHHHHCCCCEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHH RLTHLKKEFVSTNIRETKISSHITDRANTILKEIIQYGFQGVSEHLKDRLFQLKRSCLEE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLWPSEILSGLQEEYSKYLLHDSLFDPDQVVYLLGEWIIRMDALKENKGAIPSLVISGD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TKTYSSELIVRSLIGLGSGIKVLQKGFVVLSYFADPKSDKILLYECSFEKHTEEPFHSIG CCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHCC NFTVFKGIPLHNFGKSSIVSSSIKKTTSGKLQFSNKLTLNPQTFFFESLSESILSNNFNE CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCHHHHHHHHHHHHHHCCHHH TIKILLEKPPRPLGPRWAAGNFFVFKVERFTQPHFDNILQQINIELEDQNGNIAYVQLPY HHHHHHCCCCCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHCCCEEECCCCCEEEEEECC YTRASDGIENLKHALGDSHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQPYLDSKS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCEEECCCCCCCC HSDKSNFQTQNQVRSETDSLNNYITELRTTISEVCLIGLKQYGKINHWKKLVQQSENLGL CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH KKISTLLESIIASIQSSKDPNVSPILILTALLCLSKEMELLSQK HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGS CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEECCC VPIQESSCTCSSTGVCRHIIRTIVAYQKRNISDKPNLSWNPGSISDESLRSFISASSFTK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AKSIFNSGIAVELDRTDVPVAKIHGLGTVHFPVPNDIRYARADCKGSLGEQIIAIAVWSF HHHHHCCCCEEEECCCCCCHHHHCCCCEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHH RLTHLKKEFVSTNIRETKISSHITDRANTILKEIIQYGFQGVSEHLKDRLFQLKRSCLEE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLWPSEILSGLQEEYSKYLLHDSLFDPDQVVYLLGEWIIRMDALKENKGAIPSLVISGD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TKTYSSELIVRSLIGLGSGIKVLQKGFVVLSYFADPKSDKILLYECSFEKHTEEPFHSIG CCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHCC NFTVFKGIPLHNFGKSSIVSSSIKKTTSGKLQFSNKLTLNPQTFFFESLSESILSNNFNE CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCHHHHHHHHHHHHHHCCHHH TIKILLEKPPRPLGPRWAAGNFFVFKVERFTQPHFDNILQQINIELEDQNGNIAYVQLPY HHHHHHCCCCCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHCCCEEECCCCCEEEEEECC YTRASDGIENLKHALGDSHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQPYLDSKS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCEEECCCCCCCC HSDKSNFQTQNQVRSETDSLNNYITELRTTISEVCLIGLKQYGKINHWKKLVQQSENLGL CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH KKISTLLESIIASIQSSKDPNVSPILILTALLCLSKEMELLSQK HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]