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The map label for this gene is 45658722

Identifier: 45658722

GI number: 45658722

Start: 3493390

End: 3494199

Strand: Reverse

Name: 45658722

Synonym: LIC12892

Alternate gene names: NA

Gene position: 3494199-3493390 (Counterclockwise)

Preceding gene: 45658723

Following gene: 45658721

Centisome position: 81.69

GC content: 36.3

Gene sequence:

>810_bases
ATGTTTAAAAAATCAGTTAAATTGATAATAATGGTTATCTTGAGTTTGTTTGTATTTTCATGTGCAGTACATTACAATCT
TGCTGAACCTGAAATTGCACCTCCTCGTAAGGAGATGAAAAAACATGCGAAGATTGGCTTTGTTGGATTTTTGTCATACC
GTTCTGCGTATGACGGAGACAACGGCCGTTATCCTATAGTATTGGATTCATCTGCTAGACTTAGGTTTCATGAGGATGTA
GGAATGTCGACTTCAGATATGAAGTCTAATGGATTCCGCAAAGATATTTCTAAAACTAAAATTGAAAACTTAGTCAATTG
GTATATGGCAGACCTTGTACAGGACGATACTAAGGAGTCGGCCAAGAAGGAGTTAGAAAATATCATTCAGTTTCCGACAG
GTGAAAGTCAGGAAATGAAATTAAAGGATTTTGGTTTGGATTATTACGTAGTTGGTAAACTTGAACCAGGGTTCGAGTTC
AGTAAGAATTTGGGTTGGGCTTTCATAAGTGGGTTTAATTATATGGTGACGACGTTAACCCTAGGTATCATTCCATCTTG
GTTTGAAATAGAGAATAACCTTAGGATTGCTATATATAATAAGAATTTAGACAAGATTTCAGAATTAAATATAGATGCAT
CGTATTCGACGTATCATGCGGTATGGGCAACCCCATACCCGAAGGAATGCGCGGTTTATGGTAGGATGCATTGTTGGTTG
AAGAGGGGATTGAATGCAACTCCGACGTTCGCATATAAAAATATAAAACCTGTTGTTGAAAATGAAATATTGGAAGTTAT
TAATAAATGA

Upstream 100 bases:

>100_bases
AGGGACTGAAGGCAATTAACTTCAGCATATTAAGGTTTTTACATATATTTTTGGATGAGTGTATAAATGGTTCAAGAAGT
AAATAGATTAAGAACAAAAG

Downstream 100 bases:

>100_bases
TAACAATTTCCAGGCTCCTAAGAGTGGCCGAATCTTCTATCGGAACTTTAAAGACGAGACTTTTTACAAGAAGGCGACTC
TGAGGGATTGAGTTCCCAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MFKKSVKLIIMVILSLFVFSCAVHYNLAEPEIAPPRKEMKKHAKIGFVGFLSYRSAYDGDNGRYPIVLDSSARLRFHEDV
GMSTSDMKSNGFRKDISKTKIENLVNWYMADLVQDDTKESAKKELENIIQFPTGESQEMKLKDFGLDYYVVGKLEPGFEF
SKNLGWAFISGFNYMVTTLTLGIIPSWFEIENNLRIAIYNKNLDKISELNIDASYSTYHAVWATPYPKECAVYGRMHCWL
KRGLNATPTFAYKNIKPVVENEILEVINK

Sequences:

>Translated_269_residues
MFKKSVKLIIMVILSLFVFSCAVHYNLAEPEIAPPRKEMKKHAKIGFVGFLSYRSAYDGDNGRYPIVLDSSARLRFHEDV
GMSTSDMKSNGFRKDISKTKIENLVNWYMADLVQDDTKESAKKELENIIQFPTGESQEMKLKDFGLDYYVVGKLEPGFEF
SKNLGWAFISGFNYMVTTLTLGIIPSWFEIENNLRIAIYNKNLDKISELNIDASYSTYHAVWATPYPKECAVYGRMHCWL
KRGLNATPTFAYKNIKPVVENEILEVINK
>Mature_269_residues
MFKKSVKLIIMVILSLFVFSCAVHYNLAEPEIAPPRKEMKKHAKIGFVGFLSYRSAYDGDNGRYPIVLDSSARLRFHEDV
GMSTSDMKSNGFRKDISKTKIENLVNWYMADLVQDDTKESAKKELENIIQFPTGESQEMKLKDFGLDYYVVGKLEPGFEF
SKNLGWAFISGFNYMVTTLTLGIIPSWFEIENNLRIAIYNKNLDKISELNIDASYSTYHAVWATPYPKECAVYGRMHCWL
KRGLNATPTFAYKNIKPVVENEILEVINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30880; Mature: 30880

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKSVKLIIMVILSLFVFSCAVHYNLAEPEIAPPRKEMKKHAKIGFVGFLSYRSAYDGD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCC
NGRYPIVLDSSARLRFHEDVGMSTSDMKSNGFRKDISKTKIENLVNWYMADLVQDDTKES
CCEEEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKELENIIQFPTGESQEMKLKDFGLDYYVVGKLEPGFEFSKNLGWAFISGFNYMVTTLT
HHHHHHHHHCCCCCCCCCEEHHHCCCCEEEEEECCCCCHHHHCCCEEEECCCHHHHHHHH
LGIIPSWFEIENNLRIAIYNKNLDKISELNIDASYSTYHAVWATPYPKECAVYGRMHCWL
HHHCCCCEEECCCCEEEEEECCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
KRGLNATPTFAYKNIKPVVENEILEVINK
HCCCCCCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFKKSVKLIIMVILSLFVFSCAVHYNLAEPEIAPPRKEMKKHAKIGFVGFLSYRSAYDGD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCC
NGRYPIVLDSSARLRFHEDVGMSTSDMKSNGFRKDISKTKIENLVNWYMADLVQDDTKES
CCEEEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKELENIIQFPTGESQEMKLKDFGLDYYVVGKLEPGFEFSKNLGWAFISGFNYMVTTLT
HHHHHHHHHCCCCCCCCCEEHHHCCCCEEEEEECCCCCHHHHCCCEEEECCCHHHHHHHH
LGIIPSWFEIENNLRIAIYNKNLDKISELNIDASYSTYHAVWATPYPKECAVYGRMHCWL
HHHCCCCEEECCCCEEEEEECCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
KRGLNATPTFAYKNIKPVVENEILEVINK
HCCCCCCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA