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The map label for this gene is 45658720

Identifier: 45658720

GI number: 45658720

Start: 3491722

End: 3492231

Strand: Direct

Name: 45658720

Synonym: LIC12890

Alternate gene names: NA

Gene position: 3491722-3492231 (Clockwise)

Preceding gene: 45658717

Following gene: 45658727

Centisome position: 81.64

GC content: 37.65

Gene sequence:

>510_bases
ATGAAATCAAATACAAAATCATTTTATCATTTGACTTTTTCAAGCTGCACTACGGATTTCCGGACTCCGCTTTCTACATT
TGGTGTGGGTTCTGCACTGCTTGGAATCAAACACAAAAAGACTACCCGTTATTCTCCTTGGCAAAATTGTTATGCAGAAC
GCTGGATTAAAACATGTAGAAATGAATTCTTAGATTTCTTCATTCCAATCAATCAGTATCACTTGGAAAAAAACTTAACC
GAGTTTGTTCATTTTTACAATCATCACAGAACCCCATTTGGCCCTGAACAAAGACAGTCCTGTTTCATCCCCTGTTCTAA
AACCGCCTCCGGGTGCAAAGCTTGGTGCTACTCCCATAATCGGCGGTTTGTATCACACCTATTCTTACAACAAAGCCGCT
TAACTTTAGTAAGCGTTAAGACATTTCGTCTTGTTTCAAAACTACTTTGTCAAATTAGGTCAGATATCTCACGTCTTCAC
CTTAACTTTTTTCTCGAAATATTGATTTAA

Upstream 100 bases:

>100_bases
TTGTTCCGATATAGCTTCTATTTCAAAGAAAAAGAAATAGTAGGCTTTCAGATTCAATCACCGGTTAACTTCAAGGTACC
GGTGATTTTTTATTTTCAAT

Downstream 100 bases:

>100_bases
AAACCTATTATTTAGTCTTTTTGAATGTCGTTTATAATCAAAACAGAGACTCAGTCGATCCAAGCCTCTGTTATATTTAT
CGAAGTCTCTGTGATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKSNTKSFYHLTFSSCTTDFRTPLSTFGVGSALLGIKHKKTTRYSPWQNCYAERWIKTCRNEFLDFFIPINQYHLEKNLT
EFVHFYNHHRTPFGPEQRQSCFIPCSKTASGCKAWCYSHNRRFVSHLFLQQSRLTLVSVKTFRLVSKLLCQIRSDISRLH
LNFFLEILI

Sequences:

>Translated_169_residues
MKSNTKSFYHLTFSSCTTDFRTPLSTFGVGSALLGIKHKKTTRYSPWQNCYAERWIKTCRNEFLDFFIPINQYHLEKNLT
EFVHFYNHHRTPFGPEQRQSCFIPCSKTASGCKAWCYSHNRRFVSHLFLQQSRLTLVSVKTFRLVSKLLCQIRSDISRLH
LNFFLEILI
>Mature_169_residues
MKSNTKSFYHLTFSSCTTDFRTPLSTFGVGSALLGIKHKKTTRYSPWQNCYAERWIKTCRNEFLDFFIPINQYHLEKNLT
EFVHFYNHHRTPFGPEQRQSCFIPCSKTASGCKAWCYSHNRRFVSHLFLQQSRLTLVSVKTFRLVSKLLCQIRSDISRLH
LNFFLEILI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20013; Mature: 20013

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNTKSFYHLTFSSCTTDFRTPLSTFGVGSALLGIKHKKTTRYSPWQNCYAERWIKTCR
CCCCCCEEEEEEHHHHCCHHCCCHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
NEFLDFFIPINQYHLEKNLTEFVHFYNHHRTPFGPEQRQSCFIPCSKTASGCKAWCYSHN
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
RRFVSHLFLQQSRLTLVSVKTFRLVSKLLCQIRSDISRLHLNFFLEILI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKSNTKSFYHLTFSSCTTDFRTPLSTFGVGSALLGIKHKKTTRYSPWQNCYAERWIKTCR
CCCCCCEEEEEEHHHHCCHHCCCHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
NEFLDFFIPINQYHLEKNLTEFVHFYNHHRTPFGPEQRQSCFIPCSKTASGCKAWCYSHN
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
RRFVSHLFLQQSRLTLVSVKTFRLVSKLLCQIRSDISRLHLNFFLEILI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA