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The map label for this gene is 45658710

Identifier: 45658710

GI number: 45658710

Start: 3476204

End: 3477070

Strand: Reverse

Name: 45658710

Synonym: LIC12880

Alternate gene names: NA

Gene position: 3477070-3476204 (Counterclockwise)

Preceding gene: 45658711

Following gene: 45658708

Centisome position: 81.29

GC content: 33.1

Gene sequence:

>867_bases
TTGCTAAAGAGGAGAATCAAGATGTCAAAAATTTTAATACGAATAGTATGCATTGTATTTTTTACGTCTGTATCAAACTG
TACAAAAGAAGTTGTCCGAGTCTATAATCCAGTAACTGAAAAAGATAAGAAATCATACGGGATCGTGGCTTTTGGACTTT
ATGCGTATAATCAAAATCATAAACCTTTGATGAATCTATTTAGTAAAGATGTAGGAACGGTATTTGCCGAACTTGGAACT
TATGGAGTCAAGTTTTCCGAAGTCATATCAAAAGATGAAAAAACAAATACTTTGAATGTAAGCCCGTATCCGATCGAAAA
GCCTACGATGGTGGAAAAAGTGGAAGCAACACAATACTTTGAAGGAAAGATAGGATACGTATCACCGTTTTATTTATTAC
TCTCACTCGATCCGACAAAAGAATACGTAATTACAGGAGTAAATTATACGTATCAAATCATTTGTGGACAGAAATGTCGA
AAAACTGTGATACGAAATTTTTCGATAGATCCAACCAAATCTTTTAAGGTGTTTCCGATCAAAACAAAAGCGGGAGAAAT
AACATTTGGGGGAATCTTAATGGGAAAAGTAACTAAAACTACAAAAGACGATCCGTACGGAATCATAGACGATACACCTG
AGTTAAGTGAAATCTTTTCAGGAAATAAAGTATTCATAAATCTAGAGTCTGGGGAAGACTATATCAAAGGAATGGATTCG
AATTATTTAAGAAAATTATACTATGGTGGAGAAGTAAATATTAAGAACGCAGAAAAACTATTTTATGAAAATCTAATTAA
AGCTTATCCTGAAGGATATTGGAAAACACTCGCTGAGAAAAAGAGGGCTGAATTAAACAATCAATAA

Upstream 100 bases:

>100_bases
TTTTTCGATGACTGTAAGGCAGCCTTGTAAAATAAAGTATAGAAAGATAGAAAGAATTCTGTTGTTTAAAATGATTGGTT
TCTGAAATTAAATTTTTCTA

Downstream 100 bases:

>100_bases
ATCGATAAGAAAACGCAGCAGTGATTTTCTGAAAGATTTAAGAATTTATTCCAAAAACCTTATGATCAACCATTTTTGAA
TCTCCAATAAAAAGAGGTAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLKRRIKMSKILIRIVCIVFFTSVSNCTKEVVRVYNPVTEKDKKSYGIVAFGLYAYNQNHKPLMNLFSKDVGTVFAELGT
YGVKFSEVISKDEKTNTLNVSPYPIEKPTMVEKVEATQYFEGKIGYVSPFYLLLSLDPTKEYVITGVNYTYQIICGQKCR
KTVIRNFSIDPTKSFKVFPIKTKAGEITFGGILMGKVTKTTKDDPYGIIDDTPELSEIFSGNKVFINLESGEDYIKGMDS
NYLRKLYYGGEVNIKNAEKLFYENLIKAYPEGYWKTLAEKKRAELNNQ

Sequences:

>Translated_288_residues
MLKRRIKMSKILIRIVCIVFFTSVSNCTKEVVRVYNPVTEKDKKSYGIVAFGLYAYNQNHKPLMNLFSKDVGTVFAELGT
YGVKFSEVISKDEKTNTLNVSPYPIEKPTMVEKVEATQYFEGKIGYVSPFYLLLSLDPTKEYVITGVNYTYQIICGQKCR
KTVIRNFSIDPTKSFKVFPIKTKAGEITFGGILMGKVTKTTKDDPYGIIDDTPELSEIFSGNKVFINLESGEDYIKGMDS
NYLRKLYYGGEVNIKNAEKLFYENLIKAYPEGYWKTLAEKKRAELNNQ
>Mature_288_residues
MLKRRIKMSKILIRIVCIVFFTSVSNCTKEVVRVYNPVTEKDKKSYGIVAFGLYAYNQNHKPLMNLFSKDVGTVFAELGT
YGVKFSEVISKDEKTNTLNVSPYPIEKPTMVEKVEATQYFEGKIGYVSPFYLLLSLDPTKEYVITGVNYTYQIICGQKCR
KTVIRNFSIDPTKSFKVFPIKTKAGEITFGGILMGKVTKTTKDDPYGIIDDTPELSEIFSGNKVFINLESGEDYIKGMDS
NYLRKLYYGGEVNIKNAEKLFYENLIKAYPEGYWKTLAEKKRAELNNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32900; Mature: 32900

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRRIKMSKILIRIVCIVFFTSVSNCTKEVVRVYNPVTEKDKKSYGIVAFGLYAYNQNH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCC
KPLMNLFSKDVGTVFAELGTYGVKFSEVISKDEKTNTLNVSPYPIEKPTMVEKVEATQYF
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
EGKIGYVSPFYLLLSLDPTKEYVITGVNYTYQIICGQKCRKTVIRNFSIDPTKSFKVFPI
CCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECHHHHHHHHHCCCCCCCCCEEEEEE
KTKAGEITFGGILMGKVTKTTKDDPYGIIDDTPELSEIFSGNKVFINLESGEDYIKGMDS
ECCCCCEEECEEEEECEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCH
NYLRKLYYGGEVNIKNAEKLFYENLIKAYPEGYWKTLAEKKRAELNNQ
HHHHHHEECCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKRRIKMSKILIRIVCIVFFTSVSNCTKEVVRVYNPVTEKDKKSYGIVAFGLYAYNQNH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCC
KPLMNLFSKDVGTVFAELGTYGVKFSEVISKDEKTNTLNVSPYPIEKPTMVEKVEATQYF
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
EGKIGYVSPFYLLLSLDPTKEYVITGVNYTYQIICGQKCRKTVIRNFSIDPTKSFKVFPI
CCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECHHHHHHHHHCCCCCCCCCEEEEEE
KTKAGEITFGGILMGKVTKTTKDDPYGIIDDTPELSEIFSGNKVFINLESGEDYIKGMDS
ECCCCCEEECEEEEECEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCH
NYLRKLYYGGEVNIKNAEKLFYENLIKAYPEGYWKTLAEKKRAELNNQ
HHHHHHEECCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA