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The map label for this gene is 45658641

Identifier: 45658641

GI number: 45658641

Start: 3415314

End: 3416231

Strand: Reverse

Name: 45658641

Synonym: LIC12810

Alternate gene names: NA

Gene position: 3416231-3415314 (Counterclockwise)

Preceding gene: 45658642

Following gene: 45658640

Centisome position: 79.87

GC content: 41.94

Gene sequence:

>918_bases
ATGGACAAGACCCGACTTTATTCTGAATATTCTGGAATTCCTGAAGACGATCAGAGACTGATCTACGCTTCTTTTCTAGT
TCTTGCTCTCGCGTCTTTTTTTACCGCACATTTACTTACAAGAAACATGTTATGGAAGATTCTCGGAAGCGAGCCCATGG
TGAAAATGGAAAGCAACGAGGAAAAAGAAAAAATCTACGAGGTTCTTTTGGAACAAGACTTTGTAGATAAAAACGTTAAG
GACGAATACAAGGCGCTTTCCAACGTGGACGCGGCGGGTGCTGGTGGAATCACAAAAAAACAAGGGTTTCATTCTGCGAG
TCCTTTTCGAGAATTTATTATGGGAAGTCTTGCGAGAAGACCTTCTGAAACTCAAAAACAGGAAACCAAAGAAAAGAACG
ATGAAAAAGTTTTTGAAGTAGGGATTTATAAGATCGATCCGGTTCAAACAACTAACACTGATAATACGAAACAAAGTACT
CAAACCTACGGAAGGATGACTAAGATTCCGTTTAATTATCGGTTTGAACAGGATTTTCTGTTTCGTTGGGACGGAAATCA
GGCTCTTTCCATCCCCAGAAAAAAACTCGCCGGTTACGAATACTTTAAACGGATGCTGAAACAGATCGAAGGAAGTTTTG
CTCCTCCCGGTGGGGGTAATTATGCGTATCGTGATATGGCGGGAACCGTGGTTCGAGAAGGAATTCTTCCGGGACAAGTC
AAAGTACTTTTTATGTTAAGCGAAGGTGGCCAGGTTTTAGATACGAGACTAGTTTCCAGTCAAGGACAGGACGTGGTGAG
TCAAGCGTGTGTGGATTCTATCCGAGGACAAAATTTCGGAAAGGTTCCGGATGAAGTCAAAGCACAGGGTTTGATTTTCG
GAATCAACTTTATATTTCCTATGATGCGTACTCGTTGA

Upstream 100 bases:

>100_bases
ATGGTTCGAATTGGGCTTATCAATCGAACTCCCGCAGGTAGAGTTGCGACTGAAAAGGCTTATCGCCAATTGAAAAGAAT
GGAAGATTTTTCCGTACATC

Downstream 100 bases:

>100_bases
CCTTTTTAAAATCTCTAGATTCGATCCATTTAAGCACCGCTTTGTTAATAGCCGATTCCCTGAAAAAGAAACTTATTATC
TGTGCATATGATAGAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDKTRLYSEYSGIPEDDQRLIYASFLVLALASFFTAHLLTRNMLWKILGSEPMVKMESNEEKEKIYEVLLEQDFVDKNVK
DEYKALSNVDAAGAGGITKKQGFHSASPFREFIMGSLARRPSETQKQETKEKNDEKVFEVGIYKIDPVQTTNTDNTKQST
QTYGRMTKIPFNYRFEQDFLFRWDGNQALSIPRKKLAGYEYFKRMLKQIEGSFAPPGGGNYAYRDMAGTVVREGILPGQV
KVLFMLSEGGQVLDTRLVSSQGQDVVSQACVDSIRGQNFGKVPDEVKAQGLIFGINFIFPMMRTR

Sequences:

>Translated_305_residues
MDKTRLYSEYSGIPEDDQRLIYASFLVLALASFFTAHLLTRNMLWKILGSEPMVKMESNEEKEKIYEVLLEQDFVDKNVK
DEYKALSNVDAAGAGGITKKQGFHSASPFREFIMGSLARRPSETQKQETKEKNDEKVFEVGIYKIDPVQTTNTDNTKQST
QTYGRMTKIPFNYRFEQDFLFRWDGNQALSIPRKKLAGYEYFKRMLKQIEGSFAPPGGGNYAYRDMAGTVVREGILPGQV
KVLFMLSEGGQVLDTRLVSSQGQDVVSQACVDSIRGQNFGKVPDEVKAQGLIFGINFIFPMMRTR
>Mature_305_residues
MDKTRLYSEYSGIPEDDQRLIYASFLVLALASFFTAHLLTRNMLWKILGSEPMVKMESNEEKEKIYEVLLEQDFVDKNVK
DEYKALSNVDAAGAGGITKKQGFHSASPFREFIMGSLARRPSETQKQETKEKNDEKVFEVGIYKIDPVQTTNTDNTKQST
QTYGRMTKIPFNYRFEQDFLFRWDGNQALSIPRKKLAGYEYFKRMLKQIEGSFAPPGGGNYAYRDMAGTVVREGILPGQV
KVLFMLSEGGQVLDTRLVSSQGQDVVSQACVDSIRGQNFGKVPDEVKAQGLIFGINFIFPMMRTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34638; Mature: 34638

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTRLYSEYSGIPEDDQRLIYASFLVLALASFFTAHLLTRNMLWKILGSEPMVKMESNE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCH
EKEKIYEVLLEQDFVDKNVKDEYKALSNVDAAGAGGITKKQGFHSASPFREFIMGSLARR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PSETQKQETKEKNDEKVFEVGIYKIDPVQTTNTDNTKQSTQTYGRMTKIPFNYRFEQDFL
CCHHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCEE
FRWDGNQALSIPRKKLAGYEYFKRMLKQIEGSFAPPGGGNYAYRDMAGTVVREGILPGQV
EEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
KVLFMLSEGGQVLDTRLVSSQGQDVVSQACVDSIRGQNFGKVPDEVKAQGLIFGINFIFP
EEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEHHHHHH
MMRTR
HHHCC
>Mature Secondary Structure
MDKTRLYSEYSGIPEDDQRLIYASFLVLALASFFTAHLLTRNMLWKILGSEPMVKMESNE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCH
EKEKIYEVLLEQDFVDKNVKDEYKALSNVDAAGAGGITKKQGFHSASPFREFIMGSLARR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PSETQKQETKEKNDEKVFEVGIYKIDPVQTTNTDNTKQSTQTYGRMTKIPFNYRFEQDFL
CCHHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCEE
FRWDGNQALSIPRKKLAGYEYFKRMLKQIEGSFAPPGGGNYAYRDMAGTVVREGILPGQV
EEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
KVLFMLSEGGQVLDTRLVSSQGQDVVSQACVDSIRGQNFGKVPDEVKAQGLIFGINFIFP
EEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEHHHHHH
MMRTR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA