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The map label for this gene is yxjL [H]

Identifier: 45658638

GI number: 45658638

Start: 3412218

End: 3412919

Strand: Direct

Name: yxjL [H]

Synonym: LIC12807

Alternate gene names: 45658638

Gene position: 3412218-3412919 (Clockwise)

Preceding gene: 45658637

Following gene: 45658639

Centisome position: 79.78

GC content: 34.9

Gene sequence:

>702_bases
ATGGTACTACAAAAGATTTCCACAACGACTAAATCTAATTATTCAGTTTCCATCGTGGAAGATAACCCACACACCGCACT
TAATCTTCAAGAACTTCTTTCCAAGTCTAATGAATTTAAATTTCTAGAACACTATCCAAATTCTCACAAAGCGATTGAAA
AAATCCCTCTCAATATTCCCGATATAGTAATTTTGGATATAGGACTTCCAGAAAAGAGCGGATTAGAATGTTTGAAAGAA
CTCAAAGAAAAAACACCTAACACTAAATATGTGATATTTACAGTTTTTGAAGACGAAGAAAAAATCGTAGAAGCGATACA
AGAGGGGGCATCCGGTTATCTTTTAAAAGATACTTCTCCTGAACTGTTTTTGGCGGAACTCAAAGTAATTGTATTAGGAG
GAGCTCCTCTTACTCCTAGAATTGCGGATAAAATCATTCGAAAATTCACCAAAAAAGAAGAATCTAAAAATCAACCGATT
CAAAATACTTTAGGACTTACAAAAAGAAAACTTCAAATTCTTAATTTTATCGCGCTTGGAATGACCGTTTCCGATATCGC
TGACGAACTAGATATATCCAGTCATACCGTTAGCAGACATATAGAAAAGATTTATAAAAAAATGGAAGTCCATTCTAAAT
CAGAGGCAATTATACGCGGAAGAAGGATGGGAATCATCCAAGACATTCCCGGATACCCTTAG

Upstream 100 bases:

>100_bases
AATTCAACAAGTAAACTGGGGCCAATTTAAAATTTTGAATTCCCGTTCATTATATAGAAAAATTATTTACCAATCGAAAT
AAATTCGTATAATCAAAACG

Downstream 100 bases:

>100_bases
ATGTTTTGCATAAGGACATTCGTATTTTTTAATTTTCTTATATTTATTTCATTTTTTACCAATTGCTCTTTTCCACCTGT
TTTTCAACAAACTGCAAAAC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHKAIEKIPLNIPDIVILDIGLPEKSGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFTKKEESKNQPI
QNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP

Sequences:

>Translated_233_residues
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHKAIEKIPLNIPDIVILDIGLPEKSGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFTKKEESKNQPI
QNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
>Mature_233_residues
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHKAIEKIPLNIPDIVILDIGLPEKSGLECLKE
LKEKTPNTKYVIFTVFEDEEKIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFTKKEESKNQPI
QNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=208, Percent_Identity=32.6923076923077, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=27.4038461538462, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790102, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788222, Length=201, Percent_Identity=23.3830845771144, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786747, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26279; Mature: 26279

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHKAIEKIPLNIP
CCCCCCCCCCCCCEEEEEEECCCCCEECHHHHHCCCCCCCHHHHCCCCHHHHHHCCCCCC
DIVILDIGLPEKSGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQEGASGYLLKDTSP
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEECCCC
ELFLAELKVIVLGGAPLTPRIADKIIRKFTKKEESKNQPIQNTLGLTKRKLQILNFIALG
HHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
MTVSDIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHKAIEKIPLNIP
CCCCCCCCCCCCCEEEEEEECCCCCEECHHHHHCCCCCCCHHHHCCCCHHHHHHCCCCCC
DIVILDIGLPEKSGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQEGASGYLLKDTSP
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEECCCC
ELFLAELKVIVLGGAPLTPRIADKIIRKFTKKEESKNQPIQNTLGLTKRKLQILNFIALG
HHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
MTVSDIADELDISSHTVSRHIEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]