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The map label for this gene is 45658528

Identifier: 45658528

GI number: 45658528

Start: 3272518

End: 3274191

Strand: Direct

Name: 45658528

Synonym: LIC12693

Alternate gene names: NA

Gene position: 3272518-3274191 (Clockwise)

Preceding gene: 45658526

Following gene: 45658543

Centisome position: 76.51

GC content: 36.14

Gene sequence:

>1674_bases
ATGTATTACAAAAAGAAAAGGACATTAGAAAAATTTCTCGTTTTCGGAACCATTCTACTCACGATGATTCAGCCTACTTG
GAGTGAGGACATACTTCCGGAAGAAACTGTTTTAGAAGAGAATAAAAAATCTCCCGTTGAAAATTTAGGTGACTCCAAAA
AAATATTGAGACTGACTTTAAAAGACGCAGTCAATTATGTTCTTGAAAAGAATATTACAATCCAAAACGCTAAAATGGAA
TATGTAAAAGCGGACGGTGGAGAACTTAAAAACGAATCCCAATTTACTTGGAATCTAATCGGTGGAATTACCGTTTTCAG
GACAACTCTCCCTGCCAATAGAAATAACATCTTTGCCGGAACCAAACAAAGCCAAGATAAATTAAGCGTCGGAATTGAGA
AAAATTTTAGAACTGGAACGTATGCAAAATTAGAAGCAAGTACTACTCGTTTTGATACGAGCGCTTTCGAAAACCCGTCC
ACAACTCCTTCCAACTTAGCGGCGCTTGCAATTCCTCCTTTATATACAGGCGCTTTGACCATCACTTTAAGCCAGGAAAT
CTTAAAGTATAGTTTTGGAAAAACTCAGAAAGAAAGAGAAGCCATTTTAAGACAAAATACTGTAATCAAAAGAGAAGAAT
TGATTTATGTACTTTCGCAGCTTGTAGCACAAACATTGATTCAATATTGGAGTTTAAATATCTACGACTCGAACGTAAAA
ACGCTGCAAGATTTAGAATCCAATACTAGAAACATCAGAGATTTGACCGTTAGAAAACGAAACTTAGGGCTTTCGGAAGG
TTTTGAAGTCAATCTATGGAATTCTATTCTTTCTCAAACAGCAGGTAATTTAGAAAAAGCTAAAGTGTCTCGTAAAGAAG
CAGAAAGAAATTTAATTCGGATTTTAAACGCGGATCCTTCTTCTAAAATCGAAGGTGTTACTGATCTTCAAGAAAACGTT
CCTTTAGATTTTAACGTGGAAAAGGATTATATCTACGCACTTGATCATAGAACCGATCTAAAAAATCTTCGCAAACAAAG
GGAAATCGCAGAATTAAATCTTAAGATCAAAGAAGCAGAAGACATGCCTTCTTTAAAACTTTCAGGGGCCTATTCTACAA
GAGGACAAAATATTGTTTCTCCTCAACAAAATCTCACGGATGGAAATAGAGGAGTCGCCTCTTTTAAATATCCGGAAGCA
TACGCGGCTTTTCAATTTTCTTATCCTCTTTGGGATAAAGGGATCAAGGCAGATATTCGAAACGCAAAATTAGACGTACA
GAATCTAGAAAAAAAAGAAGCTGAGTTAAAACTTTCCATCAAAGAAGAATTAGAAAATCGTTATGCTGCCATCGTTGCCG
ATAAAGATATTTTCGAAGGTGCTAAAAAAAGAAAGGAAGAAGCAAATAAATTCTACAAAGGTCTTTCCGAACGTTTTCGT
CAGGGAAGATTTACCGCGGTCGCGGTTAAAAACGCCTTAGACAACGTAATTCAATCTGAATTACAAGTTACCCAGGCAAA
AATTCAACTGAACATAGACATTCTTCGTTATGAATTGGCAAAAAATCATATCTTCGAAAGGTTCGGCGTGAACGTAAATG
ACATCATCGATCGACTGATGAAGATGGTGGATATTGCACAATCCAAATCTTCTACGGAAACTTCCGAAAAATAA

Upstream 100 bases:

>100_bases
TGGATTCCATTGAATTGTTCTCTTTTAGACTCATAAAATCTATTTTTCGATTTCTAAAAAACTTCCTACATTCAACCATG
TCCATTCAGTAGGCACTTGT

Downstream 100 bases:

>100_bases
ATCTTCCGGTTCTACTTCTTTTTTAAGTTGATAGTTGATCCAAGTTCATTGATCTCAAAAGTTCTTTTTTATTTAACGTG
AGTTCGGCGGATTCATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: LC-Like Outer Membrane Efflux Protein; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MYYKKKRTLEKFLVFGTILLTMIQPTWSEDILPEETVLEENKKSPVENLGDSKKILRLTLKDAVNYVLEKNITIQNAKME
YVKADGGELKNESQFTWNLIGGITVFRTTLPANRNNIFAGTKQSQDKLSVGIEKNFRTGTYAKLEASTTRFDTSAFENPS
TTPSNLAALAIPPLYTGALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYVLSQLVAQTLIQYWSLNIYDSNVK
TLQDLESNTRNIRDLTVRKRNLGLSEGFEVNLWNSILSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENV
PLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNLTDGNRGVASFKYPEA
YAAFQFSYPLWDKGIKADIRNAKLDVQNLEKKEAELKLSIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFR
QGRFTAVAVKNALDNVIQSELQVTQAKIQLNIDILRYELAKNHIFERFGVNVNDIIDRLMKMVDIAQSKSSTETSEK

Sequences:

>Translated_557_residues
MYYKKKRTLEKFLVFGTILLTMIQPTWSEDILPEETVLEENKKSPVENLGDSKKILRLTLKDAVNYVLEKNITIQNAKME
YVKADGGELKNESQFTWNLIGGITVFRTTLPANRNNIFAGTKQSQDKLSVGIEKNFRTGTYAKLEASTTRFDTSAFENPS
TTPSNLAALAIPPLYTGALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYVLSQLVAQTLIQYWSLNIYDSNVK
TLQDLESNTRNIRDLTVRKRNLGLSEGFEVNLWNSILSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENV
PLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNLTDGNRGVASFKYPEA
YAAFQFSYPLWDKGIKADIRNAKLDVQNLEKKEAELKLSIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFR
QGRFTAVAVKNALDNVIQSELQVTQAKIQLNIDILRYELAKNHIFERFGVNVNDIIDRLMKMVDIAQSKSSTETSEK
>Mature_557_residues
MYYKKKRTLEKFLVFGTILLTMIQPTWSEDILPEETVLEENKKSPVENLGDSKKILRLTLKDAVNYVLEKNITIQNAKME
YVKADGGELKNESQFTWNLIGGITVFRTTLPANRNNIFAGTKQSQDKLSVGIEKNFRTGTYAKLEASTTRFDTSAFENPS
TTPSNLAALAIPPLYTGALTITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYVLSQLVAQTLIQYWSLNIYDSNVK
TLQDLESNTRNIRDLTVRKRNLGLSEGFEVNLWNSILSQTAGNLEKAKVSRKEAERNLIRILNADPSSKIEGVTDLQENV
PLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIVSPQQNLTDGNRGVASFKYPEA
YAAFQFSYPLWDKGIKADIRNAKLDVQNLEKKEAELKLSIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFR
QGRFTAVAVKNALDNVIQSELQVTQAKIQLNIDILRYELAKNHIFERFGVNVNDIIDRLMKMVDIAQSKSSTETSEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63513; Mature: 63513

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYKKKRTLEKFLVFGTILLTMIQPTWSEDILPEETVLEENKKSPVENLGDSKKILRLTL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHH
KDAVNYVLEKNITIQNAKMEYVKADGGELKNESQFTWNLIGGITVFRTTLPANRNNIFAG
HHHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEHHCEEEEEEECCCCCCCEEEC
TKQSQDKLSVGIEKNFRTGTYAKLEASTTRFDTSAFENPSTTPSNLAALAIPPLYTGALT
CCCCCCHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE
ITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYVLSQLVAQTLIQYWSLNIYDSNVK
EEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHH
TLQDLESNTRNIRDLTVRKRNLGLSEGFEVNLWNSILSQTAGNLEKAKVSRKEAERNLIR
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHE
ILNADPSSKIEGVTDLQENVPLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAE
EECCCCCCCCCCHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCC
DMPSLKLSGAYSTRGQNIVSPQQNLTDGNRGVASFKYPEAYAAFQFSYPLWDKGIKADIR
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHC
NAKLDVQNLEKKEAELKLSIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFR
CCCCCHHHHHHHHHHEEEEHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRFTAVAVKNALDNVIQSELQVTQAKIQLNIDILRYELAKNHIFERFGVNVNDIIDRLM
CCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KMVDIAQSKSSTETSEK
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYYKKKRTLEKFLVFGTILLTMIQPTWSEDILPEETVLEENKKSPVENLGDSKKILRLTL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHCCCCHHHHHHHH
KDAVNYVLEKNITIQNAKMEYVKADGGELKNESQFTWNLIGGITVFRTTLPANRNNIFAG
HHHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEHHCEEEEEEECCCCCCCEEEC
TKQSQDKLSVGIEKNFRTGTYAKLEASTTRFDTSAFENPSTTPSNLAALAIPPLYTGALT
CCCCCCHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE
ITLSQEILKYSFGKTQKEREAILRQNTVIKREELIYVLSQLVAQTLIQYWSLNIYDSNVK
EEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHH
TLQDLESNTRNIRDLTVRKRNLGLSEGFEVNLWNSILSQTAGNLEKAKVSRKEAERNLIR
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHE
ILNADPSSKIEGVTDLQENVPLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAE
EECCCCCCCCCCHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCC
DMPSLKLSGAYSTRGQNIVSPQQNLTDGNRGVASFKYPEAYAAFQFSYPLWDKGIKADIR
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHC
NAKLDVQNLEKKEAELKLSIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFR
CCCCCHHHHHHHHHHEEEEHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRFTAVAVKNALDNVIQSELQVTQAKIQLNIDILRYELAKNHIFERFGVNVNDIIDRLM
CCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KMVDIAQSKSSTETSEK
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA