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The map label for this gene is 45658499

Identifier: 45658499

GI number: 45658499

Start: 3223746

End: 3224045

Strand: Direct

Name: 45658499

Synonym: LIC12662

Alternate gene names: NA

Gene position: 3223746-3224045 (Clockwise)

Preceding gene: 45658498

Following gene: 45658500

Centisome position: 75.37

GC content: 38.67

Gene sequence:

>300_bases
ATGAATAAGAAAGGAAAATACTCTCCGGAGTTTAAAGAACAAGCAGTCAAGCGAACACTTTCTGGTTCGTTTACGATAAA
AGAAGTAGCAGGGTCACTTGGAATCAGCTATTTTGTGTTACGACAATGGAGGGGAGAATACTTGAAAAAATCAGAAGATC
AGCTTCCACTTACGGATAAACAGTTAAAAGAAAGTGAAGAACTGAAAAAGCTTCGGAAGGAAAATCTGAAACTGAAAGAG
GAAGTTACTATCCTAAAAAAGTTTGCCGCCATGCTTTCCCGCGAACAAAATCCCGATTGA

Upstream 100 bases:

>100_bases
AGAGAGTGATTTATTAGTTTCTCATTTAAACGATCTATACGGATAACCTAGTTACGTAAAAACGGACACCTTTTACTCAG
CGAATGAGGTAAAGGTGAAT

Downstream 100 bases:

>100_bases
TGTTCATGGAAACTCATCGATTTGAGTATTCGATTCAAAGCATGGCTAACGTTTTAGGAGTGTCTCGTTCAGGATTCTAT
CAATTTCTAAAACGGAGTAA

Product: IS1500 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNKKGKYSPEFKEQAVKRTLSGSFTIKEVAGSLGISYFVLRQWRGEYLKKSEDQLPLTDKQLKESEELKKLRKENLKLKE
EVTILKKFAAMLSREQNPD

Sequences:

>Translated_99_residues
MNKKGKYSPEFKEQAVKRTLSGSFTIKEVAGSLGISYFVLRQWRGEYLKKSEDQLPLTDKQLKESEELKKLRKENLKLKE
EVTILKKFAAMLSREQNPD
>Mature_99_residues
MNKKGKYSPEFKEQAVKRTLSGSFTIKEVAGSLGISYFVLRQWRGEYLKKSEDQLPLTDKQLKESEELKKLRKENLKLKE
EVTILKKFAAMLSREQNPD

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11552; Mature: 11552

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKGKYSPEFKEQAVKRTLSGSFTIKEVAGSLGISYFVLRQWRGEYLKKSEDQLPLTDK
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QLKESEELKKLRKENLKLKEEVTILKKFAAMLSREQNPD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKKGKYSPEFKEQAVKRTLSGSFTIKEVAGSLGISYFVLRQWRGEYLKKSEDQLPLTDK
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QLKESEELKKLRKENLKLKEEVTILKKFAAMLSREQNPD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA