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The map label for this gene is 45658480

Identifier: 45658480

GI number: 45658480

Start: 3201895

End: 3202320

Strand: Direct

Name: 45658480

Synonym: LIC12643

Alternate gene names: NA

Gene position: 3201895-3202320 (Clockwise)

Preceding gene: 45658479

Following gene: 45658487

Centisome position: 74.86

GC content: 33.1

Gene sequence:

>426_bases
ATGTCTAAGATAAAATTTACAGATCCAAACGTTGCCGAAGTATTTAAAAACTATCCTAACGAGGCCCGCGAAAAGTTACT
CGAGTTGAGAAAACTCATTTTTAATACCGCCAATTCAATTGAAGGTGTAGGCACCTTGGAAGAAACCTTAAAATGGGGTC
AACCTAGTTATCTTACTTCGGAAACAAAAAGTGGAAGTACAATTCGAATTGATAAAGTTCCATCAAAAGAAGATAAATAC
GCACTCTATTTCCATTGTCAGACAAATTTAATCTCTACTTTTAAAGAACTTTTTCCCAAAAAGTTTGAGTTCGAAGGAAA
TCGCTCCATTCATTTAAACGTCAAAGATCCTATTCCAAATAAAGAATTGAAAGTCTGTATTTCTTTGGCGTTGACATATC
ATCTAAATAAAAAACGAAAAAGATAA

Upstream 100 bases:

>100_bases
AATCGCCTTTGGATTTCTTAATAACTCTATTATATAGATCTGAGTAAAATAAAAATATATTAATATTTAATTATATTTTA
CTTTTCAAGGAATCATTTTA

Downstream 100 bases:

>100_bases
AACATTTTGGAAAGCTACAGATAAATACGCATAACGTTCATTAAGCGAGAAGAAATCTTTATTTTTTGAATCTACCTTTA
CTCAATAATTGCACACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSKIKFTDPNVAEVFKNYPNEAREKLLELRKLIFNTANSIEGVGTLEETLKWGQPSYLTSETKSGSTIRIDKVPSKEDKY
ALYFHCQTNLISTFKELFPKKFEFEGNRSIHLNVKDPIPNKELKVCISLALTYHLNKKRKR

Sequences:

>Translated_141_residues
MSKIKFTDPNVAEVFKNYPNEAREKLLELRKLIFNTANSIEGVGTLEETLKWGQPSYLTSETKSGSTIRIDKVPSKEDKY
ALYFHCQTNLISTFKELFPKKFEFEGNRSIHLNVKDPIPNKELKVCISLALTYHLNKKRKR
>Mature_140_residues
SKIKFTDPNVAEVFKNYPNEAREKLLELRKLIFNTANSIEGVGTLEETLKWGQPSYLTSETKSGSTIRIDKVPSKEDKYA
LYFHCQTNLISTFKELFPKKFEFEGNRSIHLNVKDPIPNKELKVCISLALTYHLNKKRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16368; Mature: 16237

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIKFTDPNVAEVFKNYPNEAREKLLELRKLIFNTANSIEGVGTLEETLKWGQPSYLTS
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCC
ETKSGSTIRIDKVPSKEDKYALYFHCQTNLISTFKELFPKKFEFEGNRSIHLNVKDPIPN
CCCCCCEEEEECCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
KELKVCISLALTYHLNKKRKR
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKIKFTDPNVAEVFKNYPNEAREKLLELRKLIFNTANSIEGVGTLEETLKWGQPSYLTS
CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCC
ETKSGSTIRIDKVPSKEDKYALYFHCQTNLISTFKELFPKKFEFEGNRSIHLNVKDPIPN
CCCCCCEEEEECCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
KELKVCISLALTYHLNKKRKR
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA