Click here to switch to the map view.

The map label for this gene is 45658460

Identifier: 45658460

GI number: 45658460

Start: 3174227

End: 3174433

Strand: Direct

Name: 45658460

Synonym: LIC12623

Alternate gene names: NA

Gene position: 3174227-3174433 (Clockwise)

Preceding gene: 45658459

Following gene: 45658461

Centisome position: 74.21

GC content: 31.4

Gene sequence:

>207_bases
GTGTTTTCGTTGTATGGAAACGGTCGATTGAAGCGTTTTGTTAATTGTTGCTATGGAATTTTTCAACAACTCTATTATAA
AACTTCTATTTTATCAATTGTGGTAGTTCCTACATTTGAAGAATCAATCTATGAAGTTCAGGTTCCAACTTTTTTCAGAA
TCACGGATGATTTTTTACACCTAATATACGTTGTTTACCATTGTTAG

Upstream 100 bases:

>100_bases
ATAGTAGTTCCCACATCATTTTACAGAGGCTTTGTGGTAGTTCCCACACTTGAATACGACAGATTCAATTATTAGAATTG
TTGAAAAATTAATTCTCTAT

Downstream 100 bases:

>100_bases
AACAAACGCAGCAACGTTCATTTTCTCTGAAATGTGGGAACTCATACAAAATTCAGTATTACCAAAAAATCTTTAAATTC
CTCAAGAGACTTATTTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MFSLYGNGRLKRFVNCCYGIFQQLYYKTSILSIVVVPTFEESIYEVQVPTFFRITDDFLHLIYVVYHC

Sequences:

>Translated_68_residues
MFSLYGNGRLKRFVNCCYGIFQQLYYKTSILSIVVVPTFEESIYEVQVPTFFRITDDFLHLIYVVYHC
>Mature_68_residues
MFSLYGNGRLKRFVNCCYGIFQQLYYKTSILSIVVVPTFEESIYEVQVPTFFRITDDFLHLIYVVYHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8130; Mature: 8130

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLYGNGRLKRFVNCCYGIFQQLYYKTSILSIVVVPTFEESIYEVQVPTFFRITDDFLH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCEEEEHHHHHHH
LIYVVYHC
HHHHHHCC
>Mature Secondary Structure
MFSLYGNGRLKRFVNCCYGIFQQLYYKTSILSIVVVPTFEESIYEVQVPTFFRITDDFLH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCEEEEHHHHHHH
LIYVVYHC
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA