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The map label for this gene is ybdA [C]

Identifier: 45658428

GI number: 45658428

Start: 3137354

End: 3138610

Strand: Direct

Name: ybdA [C]

Synonym: LIC12590

Alternate gene names: 45658428

Gene position: 3137354-3138610 (Clockwise)

Preceding gene: 45658427

Following gene: 45658429

Centisome position: 73.35

GC content: 41.77

Gene sequence:

>1257_bases
ATGACTCAAACTCAAATCAAACACGACCCATTCCAAGCGTTGAGAATCTCCGATTTTCGTTCTTTTCTTTTTGGTAAGTT
TACGGTAACTCTTTCCATCAGTATTCAAACCACAGTGGTCGGTTGGCAAATGTATCATCTCACAGGAAGTAATCTTCACG
TAGGTTTTATCGGTCTTGCGGAAGCGATTCCTTCCATCTCTATGGCTTTGTTTTCGGGTCTTGTAATCGATTCTTTTCCT
AGAAAAAAAATAGTGGTTTCGGCCCTTTGTCTTTTGTCGATCTGTTCCCTATTACTGCTTACATTAGTAATCCCTAATAT
AAATTGGATTTTGAGAGACTTTGGAGTTTATCCGATTTATGCCGTGATTTTTCTTTCCGGAATTGCAAGAGGTTTTTTAA
ATCCAGCCACTGCAGCGTTTCAAACCCAATTAGTAGATAAAGAAACCTTTCCCAACGCCGCCACTTGGAGTGGAATCGCT
TGGCAGACTTCTTTGGTTCTTGGCCCACTTGCGGGAGGTGTATTGATTGTATTGGGACTTTACTTCGCGTATTCTGTGGA
TCTGATTCTGATGAGTTTAGGTTTGATCATGGTGTTATTCGTAAAAGGAAAACCGGTTCCTTCCAAGCCAGAATCGAGTG
AATCTATCTGGGAAAGTCTAAGTGGAGGTTGGAAATTTGTTTCCACTCATCAAATCATATTGGGAGCGATCTCTTTGGAT
TTATTTGCGGTTCTTTTTGGAGGTGCAGTGGCCCTACTTCCTTCTTTCACGGAAAAGATCTTAGGTCAGAGTCCTGAAAT
TTTTGGCATTCTTCGTTCCGCTCAAGGAGTCGGAGCAGTTTTATGTGCCTTCTTTATTGCGGCCAAACCTCCTAAAAAAC
ATTCGGGTTGGATTCTTCTTTCTTGTGTATTTGGTTTTGGAATCTGTATCATTCTTTTCGGGTTTTCCGAAGATTATAGA
ATTTCATTTCTATGTCTTGCGGCTGCAGGCGCCTTTGATATGGTCAGTGTAGTCATTCGTCATACCATTGTCCAGATGCA
TACTCCAGATCATATGAGAGGTAGAGTCTCTGCGGTGAATCATATTTTTATAGGCTCTTCAAACGAAATCGGAGAATTCG
AATCCGGCGTTACCGCAGAATGGCTCGGAATTAGGCGTTCCATCGTAGCGGGAGGAATTTTAACTCTTTTAACTGTAGGG
CTTGTAGGAGCGATTACCCCTCGCCTTAGAAAGATGCAGCTAAAGGATATTCTTTGA

Upstream 100 bases:

>100_bases
GAAAATATTCCTAAACTGATAGCAGATCATATTCTTCATCACGGTATGGTGGTTGCCGCTTTCGGAATGTATTTTATCAA
AAACCCAATCCGGTATTAAT

Downstream 100 bases:

>100_bases
GGAATTATTTTTGTCGCGGAGTACTTCTACAAAACCTAAAATAGAAACTCTAAAAATAAAATTTCTACATAAAATTGTAG
TACTTAAACTAAACCATATA

Product: drug proton antiporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; Membrane Transporter; Facilitator Superfamily Transporter; DrugProton Antiporter; Transmembrane Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter Permease; Permease Of Facilitator Superfamily; MFS Family Transporter; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Siderophore Export Protein; Integral Membrane Protein; Permease Protein; Permeases Of Facilitator Superfamily; MFS Family Transporter Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Permease Of Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTQTQIKHDPFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLAEAIPSISMALFSGLVIDSFP
RKKIVVSALCLLSICSLLLLTLVIPNINWILRDFGVYPIYAVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIA
WQTSLVLGPLAGGVLIVLGLYFAYSVDLILMSLGLIMVLFVKGKPVPSKPESSESIWESLSGGWKFVSTHQIILGAISLD
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCAFFIAAKPPKKHSGWILLSCVFGFGICIILFGFSEDYR
ISFLCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNHIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVG
LVGAITPRLRKMQLKDIL

Sequences:

>Translated_418_residues
MTQTQIKHDPFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLAEAIPSISMALFSGLVIDSFP
RKKIVVSALCLLSICSLLLLTLVIPNINWILRDFGVYPIYAVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIA
WQTSLVLGPLAGGVLIVLGLYFAYSVDLILMSLGLIMVLFVKGKPVPSKPESSESIWESLSGGWKFVSTHQIILGAISLD
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCAFFIAAKPPKKHSGWILLSCVFGFGICIILFGFSEDYR
ISFLCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNHIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVG
LVGAITPRLRKMQLKDIL
>Mature_417_residues
TQTQIKHDPFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLAEAIPSISMALFSGLVIDSFPR
KKIVVSALCLLSICSLLLLTLVIPNINWILRDFGVYPIYAVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAW
QTSLVLGPLAGGVLIVLGLYFAYSVDLILMSLGLIMVLFVKGKPVPSKPESSESIWESLSGGWKFVSTHQIILGAISLDL
FAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCAFFIAAKPPKKHSGWILLSCVFGFGICIILFGFSEDYRI
SFLCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNHIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGL
VGAITPRLRKMQLKDIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45255; Mature: 45124

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTQIKHDPFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLA
CCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEHHHHH
EAIPSISMALFSGLVIDSFPRKKIVVSALCLLSICSLLLLTLVIPNINWILRDFGVYPIY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
AVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAWQTSLVLGPLAGGVLIVLGL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YFAYSVDLILMSLGLIMVLFVKGKPVPSKPESSESIWESLSGGWKFVSTHQIILGAISLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHH
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCAFFIAAKPPKKHSGWILL
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHH
SCVFGFGICIILFGFSEDYRISFLCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVN
HHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHE
HIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGLVGAITPRLRKMQLKDIL
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
TQTQIKHDPFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLA
CCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEHHHHH
EAIPSISMALFSGLVIDSFPRKKIVVSALCLLSICSLLLLTLVIPNINWILRDFGVYPIY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
AVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAWQTSLVLGPLAGGVLIVLGL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YFAYSVDLILMSLGLIMVLFVKGKPVPSKPESSESIWESLSGGWKFVSTHQIILGAISLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHH
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCAFFIAAKPPKKHSGWILL
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHH
SCVFGFGICIILFGFSEDYRISFLCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVN
HHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHE
HIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGLVGAITPRLRKMQLKDIL
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA