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The map label for this gene is 45658393

Identifier: 45658393

GI number: 45658393

Start: 3091198

End: 3091917

Strand: Direct

Name: 45658393

Synonym: LIC12552

Alternate gene names: NA

Gene position: 3091198-3091917 (Clockwise)

Preceding gene: 45658392

Following gene: 45658394

Centisome position: 72.27

GC content: 32.64

Gene sequence:

>720_bases
ATGGATTCTATTCGTTCTAAAAAAGAAATCAAATTGATTCTTTCAAAACTTTCCGATTCCGATGAATCCCTCTGGATTTT
CATCATTGAATCGGAGCTTTTGAAGAAAAAAATAAAGTTCCCACTACTTGAGTTTGTTGGAAAAGAACTCTATTTTAAAA
TTCCTGAAATGAATCAGATCTATTTTACAGATCAAATTATAAAGCTTGGACATATGGGAAGTTACGTCATCTCTGCAATT
ATCCTTCAGCTTCGTATGGAAAAACATTTCGAACAATCTTTAAATAAGGCTGTTGAATACATCCTTTTAGGAAACGAATG
GTACGTATGTGACATCATCGGAGAAAGAATTATGGGCTATTTTCTTCTCAAAGAGCCCGAAAAAACCCTTCCAATTTTAA
AAAATTACATCAACGATAAAAACGGTTGGATCGTTCGTTCGGTGGGAGTCGCTTCTCATTATGCAGTCAAAAAAGGTCTC
GGAAAAAAATACGTGGAAGTTACGTTTTATCTTCTTTTATCTAAAACGGATACAAAAGACTTTCATACTAAAAAAGGAAT
TGGTTGGGCTCTTAAAACCATTTCTAAATTTTATCCGGATATCATTCAAAAATTTGAATCTAATTTACTAGCAAACCCTT
CTATTCAACCGTTTTTTAGAAAAAAAATAGAAATTGGCCTAAGTAGATCTTCAAAGTATGGCTCAAAGTATTCGGATTAA

Upstream 100 bases:

>100_bases
ATAAGGGTTTTATTTTATGTTGAAGTTCAACTAAAAAAAACCGAAATCTTCCATTTTTGAAAAAATTTCATACTTTAAAC
CGTAAGTTAAAATCAATTTC

Downstream 100 bases:

>100_bases
AAATATTCTCAATAAAACGAAACGAAGAGATCCTTGGTTTTTAGACGACTATACAATCAATCCGTATAGCGGTTGTTCTT
TTCGTTGTTTATATTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDSIRSKKEIKLILSKLSDSDESLWIFIIESELLKKKIKFPLLEFVGKELYFKIPEMNQIYFTDQIIKLGHMGSYVISAI
ILQLRMEKHFEQSLNKAVEYILLGNEWYVCDIIGERIMGYFLLKEPEKTLPILKNYINDKNGWIVRSVGVASHYAVKKGL
GKKYVEVTFYLLLSKTDTKDFHTKKGIGWALKTISKFYPDIIQKFESNLLANPSIQPFFRKKIEIGLSRSSKYGSKYSD

Sequences:

>Translated_239_residues
MDSIRSKKEIKLILSKLSDSDESLWIFIIESELLKKKIKFPLLEFVGKELYFKIPEMNQIYFTDQIIKLGHMGSYVISAI
ILQLRMEKHFEQSLNKAVEYILLGNEWYVCDIIGERIMGYFLLKEPEKTLPILKNYINDKNGWIVRSVGVASHYAVKKGL
GKKYVEVTFYLLLSKTDTKDFHTKKGIGWALKTISKFYPDIIQKFESNLLANPSIQPFFRKKIEIGLSRSSKYGSKYSD
>Mature_239_residues
MDSIRSKKEIKLILSKLSDSDESLWIFIIESELLKKKIKFPLLEFVGKELYFKIPEMNQIYFTDQIIKLGHMGSYVISAI
ILQLRMEKHFEQSLNKAVEYILLGNEWYVCDIIGERIMGYFLLKEPEKTLPILKNYINDKNGWIVRSVGVASHYAVKKGL
GKKYVEVTFYLLLSKTDTKDFHTKKGIGWALKTISKFYPDIIQKFESNLLANPSIQPFFRKKIEIGLSRSSKYGSKYSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27828; Mature: 27828

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIRSKKEIKLILSKLSDSDESLWIFIIESELLKKKIKFPLLEFVGKELYFKIPEMNQI
CCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCHHHHHHCHHHEEECCCCCEE
YFTDQIIKLGHMGSYVISAIILQLRMEKHFEQSLNKAVEYILLGNEWYVCDIIGERIMGY
EEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHH
FLLKEPEKTLPILKNYINDKNGWIVRSVGVASHYAVKKGLGKKYVEVTFYLLLSKTDTKD
HHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHEEECCCCCH
FHTKKGIGWALKTISKFYPDIIQKFESNLLANPSIQPFFRKKIEIGLSRSSKYGSKYSD
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSIRSKKEIKLILSKLSDSDESLWIFIIESELLKKKIKFPLLEFVGKELYFKIPEMNQI
CCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCHHHHHHCHHHEEECCCCCEE
YFTDQIIKLGHMGSYVISAIILQLRMEKHFEQSLNKAVEYILLGNEWYVCDIIGERIMGY
EEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHH
FLLKEPEKTLPILKNYINDKNGWIVRSVGVASHYAVKKGLGKKYVEVTFYLLLSKTDTKD
HHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHEEECCCCCH
FHTKKGIGWALKTISKFYPDIIQKFESNLLANPSIQPFFRKKIEIGLSRSSKYGSKYSD
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA