Click here to switch to the map view.

The map label for this gene is 45658340

Identifier: 45658340

GI number: 45658340

Start: 3023844

End: 3024869

Strand: Direct

Name: 45658340

Synonym: LIC12498

Alternate gene names: NA

Gene position: 3023844-3024869 (Clockwise)

Preceding gene: 45658335

Following gene: 45658341

Centisome position: 70.7

GC content: 34.02

Gene sequence:

>1026_bases
ATGCTCTTAGTAAAACATTTACAAACGAATTGGAAAGTATTTGTCTTTTTTGGAATTTTATTTTGTAAACCTTCTCAGAC
CACAATGGGAAATAATCCCTATTATCAGCTCTTTAGAAAACATCCGATCACCCAAATGGAACGTTATTTTTCAATGGAAG
GTTGGGAGCAAAGAATCTCTGGACTCAACTCGGAAGAACAAAATTTCGTTCAGGAAATGAATCGAATCGATGGTATTACC
GATTTACCAGAAGCGGAAAACGAATTGAATCCTTGGAAAGAACGTCTAAGTACTGTCCGAAAATCTCTACCCAATTCAGT
AAATACGATACTTGATCGTTCTCTTTTTAAAGTAATACTTTGCAAAAATTTAGGAAGTAGCGGTCTGAGTTCCTTTGTTT
ATGATAACACAGGACCCAAAGGTGGAGTAGTCTTTTTGGATACAAAACTATTGAATCAAACCGCAAACGAATGGATCACT
CAAAAAGAAAATTCACCTTTTATTTCTGGAAATATCCAAGTTAAGGTGAGAATCGAATCGGACACAAAAGACAAAATTGA
AACCGCAATCGAATACATACTGTTACACGAAGTCGGACATATCCTCTCTGTTCAAAAAAAAATTGTGCCTGATTTTAGGG
AAGAATATAGAAACTTTAGCGAATTTGAATTTTCAAAAGGAATTTGGAAAACTGAAGACGTTTCTTACTTAGATTCGTTT
TTTCCGCTTCGAAAAGAAATCAAATTTTATACATCCAAACCGATTGAACTTTCTAAAAATTGGGATAGTATTTACCCTAC
TTTAGAAAAAACTCCATTTCCTACTCTTTATTCTGCTACAAATGCTGACGATTTTTTTGCAGACTCTTTTGTATCCTACG
TGCATACAAAACTACAAAAGAAGACCTGGAACTTGGAAATCTTTCAAAACAAAAAAAGAGTTTTTAGGATGAAAAACGGA
ATCCAAGAACCCAGATGCAAAGTACAAAAAGAATATCTAGACAATATCTTTTCGGAAACGTTTTGA

Upstream 100 bases:

>100_bases
CATCCTAAATAAGCGCAAATCATTCCGATCTTTTTTTCAAAATCAAAAATCCAGATTCGATTCGAGTTTACTTTTAAGGA
TTTTAGAAAAATCTTTAACC

Downstream 100 bases:

>100_bases
AAATGTTATAAACTTATATATGAATTTAACAAATCCAGTTTCAAGTTCATAAACTGTTGAATCCTTGGAAACTACCGCAT
TTAATTTTTTCATGGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLLVKHLQTNWKVFVFFGILFCKPSQTTMGNNPYYQLFRKHPITQMERYFSMEGWEQRISGLNSEEQNFVQEMNRIDGIT
DLPEAENELNPWKERLSTVRKSLPNSVNTILDRSLFKVILCKNLGSSGLSSFVYDNTGPKGGVVFLDTKLLNQTANEWIT
QKENSPFISGNIQVKVRIESDTKDKIETAIEYILLHEVGHILSVQKKIVPDFREEYRNFSEFEFSKGIWKTEDVSYLDSF
FPLRKEIKFYTSKPIELSKNWDSIYPTLEKTPFPTLYSATNADDFFADSFVSYVHTKLQKKTWNLEIFQNKKRVFRMKNG
IQEPRCKVQKEYLDNIFSETF

Sequences:

>Translated_341_residues
MLLVKHLQTNWKVFVFFGILFCKPSQTTMGNNPYYQLFRKHPITQMERYFSMEGWEQRISGLNSEEQNFVQEMNRIDGIT
DLPEAENELNPWKERLSTVRKSLPNSVNTILDRSLFKVILCKNLGSSGLSSFVYDNTGPKGGVVFLDTKLLNQTANEWIT
QKENSPFISGNIQVKVRIESDTKDKIETAIEYILLHEVGHILSVQKKIVPDFREEYRNFSEFEFSKGIWKTEDVSYLDSF
FPLRKEIKFYTSKPIELSKNWDSIYPTLEKTPFPTLYSATNADDFFADSFVSYVHTKLQKKTWNLEIFQNKKRVFRMKNG
IQEPRCKVQKEYLDNIFSETF
>Mature_341_residues
MLLVKHLQTNWKVFVFFGILFCKPSQTTMGNNPYYQLFRKHPITQMERYFSMEGWEQRISGLNSEEQNFVQEMNRIDGIT
DLPEAENELNPWKERLSTVRKSLPNSVNTILDRSLFKVILCKNLGSSGLSSFVYDNTGPKGGVVFLDTKLLNQTANEWIT
QKENSPFISGNIQVKVRIESDTKDKIETAIEYILLHEVGHILSVQKKIVPDFREEYRNFSEFEFSKGIWKTEDVSYLDSF
FPLRKEIKFYTSKPIELSKNWDSIYPTLEKTPFPTLYSATNADDFFADSFVSYVHTKLQKKTWNLEIFQNKKRVFRMKNG
IQEPRCKVQKEYLDNIFSETF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40061; Mature: 40061

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVKHLQTNWKVFVFFGILFCKPSQTTMGNNPYYQLFRKHPITQMERYFSMEGWEQRIS
CEEEEECCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHC
GLNSEEQNFVQEMNRIDGITDLPEAENELNPWKERLSTVRKSLPNSVNTILDRSLFKVIL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CKNLGSSGLSSFVYDNTGPKGGVVFLDTKLLNQTANEWITQKENSPFISGNIQVKVRIES
HHHCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECC
DTKDKIETAIEYILLHEVGHILSVQKKIVPDFREEYRNFSEFEFSKGIWKTEDVSYLDSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHH
FPLRKEIKFYTSKPIELSKNWDSIYPTLEKTPFPTLYSATNADDFFADSFVSYVHTKLQK
HHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KTWNLEIFQNKKRVFRMKNGIQEPRCKVQKEYLDNIFSETF
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLVKHLQTNWKVFVFFGILFCKPSQTTMGNNPYYQLFRKHPITQMERYFSMEGWEQRIS
CEEEEECCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHC
GLNSEEQNFVQEMNRIDGITDLPEAENELNPWKERLSTVRKSLPNSVNTILDRSLFKVIL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CKNLGSSGLSSFVYDNTGPKGGVVFLDTKLLNQTANEWITQKENSPFISGNIQVKVRIES
HHHCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECC
DTKDKIETAIEYILLHEVGHILSVQKKIVPDFREEYRNFSEFEFSKGIWKTEDVSYLDSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHH
FPLRKEIKFYTSKPIELSKNWDSIYPTLEKTPFPTLYSATNADDFFADSFVSYVHTKLQK
HHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KTWNLEIFQNKKRVFRMKNGIQEPRCKVQKEYLDNIFSETF
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA