Click here to switch to the map view.

The map label for this gene is yoaE [H]

Identifier: 45658328

GI number: 45658328

Start: 3012734

End: 3013453

Strand: Direct

Name: yoaE [H]

Synonym: LIC12486

Alternate gene names: 45658328

Gene position: 3012734-3013453 (Clockwise)

Preceding gene: 45658326

Following gene: 45658335

Centisome position: 70.44

GC content: 36.67

Gene sequence:

>720_bases
ATGGAATTACTTTCTCTCGATAAAGTTGTTGCAATTCTTACTCTTACTCTCATGGAAATCGTCCTAGGGATCGACAATAT
TGTTTTTCTTTCAATCGTTTCCGGAAAACTTCCTAAAAATAAACAAAATCAAGCAAGAAGTATAGGTCTTACTTTAGCCC
TAGGTTTTAGAATCGCTCTACTATTCGCAGTTAGTTGGATCGCATCCTTAACAGCTCCCTTTTTTACAATTGCAAATTTT
GCAATCTCAGGCAGAGACTTGATCATGCTCGGAGGAGGTTTGTTTTTAATCGCAAAGAGTACGAGCGAAATACACGGTAA
GGTGGAAGGTCTCGAGGAAGATCATTCTAAATCTAAGAAGGAAAAAATTTCTTTCTGGAGTGTAATCGTTCAATTGATTC
TTCTAGATATTATTTTTTCCGTGGATTCGATCGTGACCGCGGTTGGACTTTCGGGCCAATTTCAAGTTATGGTCGCAGCG
GTTATTCTTTCTATGATTGTTATGCTTATATTTTCCGGAACTGTCAGTGATTTTATCAACGAACATCCTTCTATGAAAAT
TTTAGCACTTTCATTTTTAATTATGATCGGCGCGATGTTATTTGCAGACGGACTACACTTCCATATTCCTAAAGGTTACG
TTTATTTTTCTATGGCATTCTCTTTAGGAGTAGAACTGATCAATATGAGAATTCGAAAGGCAAACTCTAAGAAACATTAA

Upstream 100 bases:

>100_bases
TAAAACTTTCCGGAAGAAACTCCATACCTATACAGTATGCCTCCTTAAGTTTCTTTGTAAATCGATTGATTTATTCCTTT
TCGAAAAATTAACTGCAAGG

Downstream 100 bases:

>100_bases
TACCCGCTTTCCGATTCCAAACGGACCACTGCCAATTGTAAAAAGGAGCAAAGGTCCGTTGCCGGTTTTTACTTTTGAGT
TCGTTTAACAAAGAATTATT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MELLSLDKVVAILTLTLMEIVLGIDNIVFLSIVSGKLPKNKQNQARSIGLTLALGFRIALLFAVSWIASLTAPFFTIANF
AISGRDLIMLGGGLFLIAKSTSEIHGKVEGLEEDHSKSKKEKISFWSVIVQLILLDIIFSVDSIVTAVGLSGQFQVMVAA
VILSMIVMLIFSGTVSDFINEHPSMKILALSFLIMIGAMLFADGLHFHIPKGYVYFSMAFSLGVELINMRIRKANSKKH

Sequences:

>Translated_239_residues
MELLSLDKVVAILTLTLMEIVLGIDNIVFLSIVSGKLPKNKQNQARSIGLTLALGFRIALLFAVSWIASLTAPFFTIANF
AISGRDLIMLGGGLFLIAKSTSEIHGKVEGLEEDHSKSKKEKISFWSVIVQLILLDIIFSVDSIVTAVGLSGQFQVMVAA
VILSMIVMLIFSGTVSDFINEHPSMKILALSFLIMIGAMLFADGLHFHIPKGYVYFSMAFSLGVELINMRIRKANSKKH
>Mature_239_residues
MELLSLDKVVAILTLTLMEIVLGIDNIVFLSIVSGKLPKNKQNQARSIGLTLALGFRIALLFAVSWIASLTAPFFTIANF
AISGRDLIMLGGGLFLIAKSTSEIHGKVEGLEEDHSKSKKEKISFWSVIVQLILLDIIFSVDSIVTAVGLSGQFQVMVAA
VILSMIVMLIFSGTVSDFINEHPSMKILALSFLIMIGAMLFADGLHFHIPKGYVYFSMAFSLGVELINMRIRKANSKKH

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=229, Percent_Identity=47.5982532751092, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1789197, Length=226, Percent_Identity=50.8849557522124, Blast_Score=199, Evalue=1e-52,
Organism=Escherichia coli, GI87082033, Length=219, Percent_Identity=44.2922374429224, Blast_Score=191, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005496
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 26147; Mature: 26147

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLSLDKVVAILTLTLMEIVLGIDNIVFLSIVSGKLPKNKQNQARSIGLTLALGFRIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LFAVSWIASLTAPFFTIANFAISGRDLIMLGGGLFLIAKSTSEIHGKVEGLEEDHSKSKK
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHCCCHHHHHHHHH
EKISFWSVIVQLILLDIIFSVDSIVTAVGLSGQFQVMVAAVILSMIVMLIFSGTVSDFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHC
EHPSMKILALSFLIMIGAMLFADGLHFHIPKGYVYFSMAFSLGVELINMRIRKANSKKH
CCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELLSLDKVVAILTLTLMEIVLGIDNIVFLSIVSGKLPKNKQNQARSIGLTLALGFRIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LFAVSWIASLTAPFFTIANFAISGRDLIMLGGGLFLIAKSTSEIHGKVEGLEEDHSKSKK
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHCCCHHHHHHHHH
EKISFWSVIVQLILLDIIFSVDSIVTAVGLSGQFQVMVAAVILSMIVMLIFSGTVSDFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHC
EHPSMKILALSFLIMIGAMLFADGLHFHIPKGYVYFSMAFSLGVELINMRIRKANSKKH
CCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]