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The map label for this gene is uspF [C]

Identifier: 45658326

GI number: 45658326

Start: 3011612

End: 3012094

Strand: Direct

Name: uspF [C]

Synonym: LIC12484

Alternate gene names: 45658326

Gene position: 3011612-3012094 (Clockwise)

Preceding gene: 45658323

Following gene: 45658328

Centisome position: 70.41

GC content: 40.58

Gene sequence:

>483_bases
TTGGAAAACCAACTTGAGAAGGATACACTTTTGGCAAAGAGAAAGTACATGCAAAGATTTATCAAAAAGATTTTAGTTCC
AGTAGACGGTTCGGAAAGTTCTAAAAAAGCTTTGGAAATGGGAATTGCGATCGCAAAAGCTGCAAACGCAAGCCTTACGA
TCTTGGAAGTGGTAGAAGAATTCGGTCCTCTTCCAGGTTATTACGAAAAAGCTCCCGAAGGAAAGGACAGAGTAAAATGG
ATTTCGGAACAAAGATTCGAAAAGATTCATTCTCCTTTAGATGAGTCACCAGAAATCAAATGGGATCGATTGGTTTTAGA
AGGTTATCCGGCAGACACAATCGTAGAAACGGCTACAAAAGGAAATTATGATATGATTGTAATCGGTTCGAGAGGACTCT
CCGCAGTAGGAAGATTTTTAGTAGGTTCCGTTTCCGATCGAATCGTTCATCACGCTACTTGTTCAGTGACGGTCGTCCGT
TAA

Upstream 100 bases:

>100_bases
TAATTGATTTGCAACTTTTTTGTCTAAGTCATTTATAAAACTAAAATTCTCCAATGAATCAAAATTAAATCGTATTAGCC
TAAATTTTAATATTTTTTGA

Downstream 100 bases:

>100_bases
CTAAGCGGGTAAAACCCCAGGTCCAAATTCTGGTCCGGGTAAAAGAGTGATTCCGGGAAGATTTTTCCAATCGGGATGAT
CTCCTATATGCCTGTATCTA

Product: DNA binding protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MENQLEKDTLLAKRKYMQRFIKKILVPVDGSESSKKALEMGIAIAKAANASLTILEVVEEFGPLPGYYEKAPEGKDRVKW
ISEQRFEKIHSPLDESPEIKWDRLVLEGYPADTIVETATKGNYDMIVIGSRGLSAVGRFLVGSVSDRIVHHATCSVTVVR

Sequences:

>Translated_160_residues
MENQLEKDTLLAKRKYMQRFIKKILVPVDGSESSKKALEMGIAIAKAANASLTILEVVEEFGPLPGYYEKAPEGKDRVKW
ISEQRFEKIHSPLDESPEIKWDRLVLEGYPADTIVETATKGNYDMIVIGSRGLSAVGRFLVGSVSDRIVHHATCSVTVVR
>Mature_160_residues
MENQLEKDTLLAKRKYMQRFIKKILVPVDGSESSKKALEMGIAIAKAANASLTILEVVEEFGPLPGYYEKAPEGKDRVKW
ISEQRFEKIHSPLDESPEIKWDRLVLEGYPADTIVETATKGNYDMIVIGSRGLSAVGRFLVGSVSDRIVHHATCSVTVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17848; Mature: 17848

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQLEKDTLLAKRKYMQRFIKKILVPVDGSESSKKALEMGIAIAKAANASLTILEVVEE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FGPLPGYYEKAPEGKDRVKWISEQRFEKIHSPLDESPEIKWDRLVLEGYPADTIVETATK
HCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEEECCCCCHHHHHHCCC
GNYDMIVIGSRGLSAVGRFLVGSVSDRIVHHATCSVTVVR
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEC
>Mature Secondary Structure
MENQLEKDTLLAKRKYMQRFIKKILVPVDGSESSKKALEMGIAIAKAANASLTILEVVEE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FGPLPGYYEKAPEGKDRVKWISEQRFEKIHSPLDESPEIKWDRLVLEGYPADTIVETATK
HCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEEECCCCCHHHHHHCCC
GNYDMIVIGSRGLSAVGRFLVGSVSDRIVHHATCSVTVVR
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]