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The map label for this gene is mcp4 [H]

Identifier: 45658324

GI number: 45658324

Start: 3007589

End: 3009391

Strand: Reverse

Name: mcp4 [H]

Synonym: LIC12482

Alternate gene names: 45658324

Gene position: 3009391-3007589 (Counterclockwise)

Preceding gene: 45658325

Following gene: 45658322

Centisome position: 70.36

GC content: 37.83

Gene sequence:

>1803_bases
ATGAATCAATTTGAATCTAAAAAACTGCGATGGAAATTAACGATAGGTTTGGAACTACTAACTTCAATTTTAGCGGTTCC
TTTGGCGGTTTTGTTCGTAATTTCTGCTGGAGGTTACGATTTCAACCAATCGATAGGGTTGATCATTTCTTCTACGATCT
CTTTGACCACTTCGTTTGTGGTTCCTTCCGTTCGTTTTGTGATTCTTGGAAGACTTTTAAAAAACTTAGAGGATAAAAAT
TGGTTTATTCTAAATTCTAAAGAAAAGTCTGAGATTAAAACTAAAATTCTCAACTTTCCTCTTTATAATTCTTGGTTTTA
TATGATCCAGTGGAGTTACGGAATCTTTGCTGCTTGGAGAATTATGCACTTATTTTTTGTTCCAAAAACGATCGAGTCGC
TTCCGTTTATTTTTTTGCCTGCAATCATTTATCCGGTTTTAGGAGTTTCTCATTTCTTTTTAACGGAATCCACACTTGTG
ACACTTTTAGAATCTGATCGTTTGGGTGATGTTTATACCGATCCCGAAAAAATAAAAACCGTTGGGATTCATACTAGAAT
TTTCAGCACGATTTCTGCGATCGCAATTCTTCCAATCGTAATTTTAGGTTATTTACTATTTGAAGAAACTTCTGGATGGA
TCAAGTTAGGAGATGTTACGATCCCATTGATTCTTACTTTGATGTTTATGTTGATTGCTGTTGGAGTTGCGTCTTTTCAG
CTTTCTTCTACGATCCGAAGAAATTCAGAAAACATGATTCAAATTTTTGCAAAGATGTCAGATGGAAATTTGACTCAGGT
TCTTCCCACCGTTTCCAGTGACGAATTGGGTTCTAATACCAGAGCCTTAAGCGAATTTGTTAAGCGACTTCGTATTATTG
TAAAAAGGGTTTCTAAGGAAGCGGTTAAACTTTCCGAAAGTTCTAAAACTTTAGGAGAGAATACAAGTGAGTTATCTAGA
AAAATGGAAGATCAGGCGGCTTCTTCCGAGGAGATGAGTTCGGCAGTTGAGGAAATTTCAGCTTCGATTCATTCTACTGC
TTCTAGAGCAGAAAGCCAAACTCTGATTGCTAAAAAAGCACAAACTTCTTTGGCGGAATTAGAAGGAAGGATTCGTCAGG
TTCACTCCGCTCTTGTAGAAACTAAAGCGGACGCGGATCGAATGAAAGGTGAAACCAAAAGTGGCGAAGAAGCTTTGAAG
GGAACTCAAAAAGCGATGGAAGCAATCGATGAAAGTACTACAAAGATGGGTGCTACAGTAAACGTAATCAAAGAAATTAC
GGATCGAATTGGTCTTCTTTCTTTGAACGCTTCGATTGAAGCAGCAAGAGCGGGTGAGGCCGGAAAAGGTTTTGCGGTTG
TAGCGCAAGAAATTGCAAAATTAGGAGAACAGACTCAAGAGAATGCTAAGAGAATTACTTCTGCGATTTCGGAAGCTTTG
AGCGCTACAAAAAGTGGTAGAGAAGTGATCGAGTCTATGCAGACCGTTTTTCAAAGAATCGGAAATACTGTAGGTACAAC
TTTGGATCGTATTTCGGAAGTAGCATTACTTTCTGATTCTCAGTTAACCGCAAGCGAGCAGGTAAAATCTGCGTTTACTG
AATTTTCTATCTCTTCGGATGAAATTAGAAATCATACTCAAGAACAGACTAAAACTTCTGAAGAGTTTTCAAAAACGATC
GTTTCGATTTCGGAAACGACCGAATTTTTAAGTAGTGTGGTCACTCAGATAGACGAATTGTCTGTTCGTTTAAATGAACA
AGCGGATAAACTGAAATCGGAGATGAATTTCTTTGAAACTTGA

Upstream 100 bases:

>100_bases
TACTTTTCTTTCGAGGTAGCATAAAAAAATGAGTTCAGTAGATAGTTTGTAAATAGAAAACCATTTACATTACAACTCGA
TTTAATCGGTAGAGTATATT

Downstream 100 bases:

>100_bases
GTGAGTTTTAGACGGCAAAGCTGTTTTCGTTTTCTTGGAAAAATATAACAGATCGATTTTGTAGTAAATTATAATATAAT
TGATTTCTATTTTTGAGAAA

Product: putative methyl-accepting chemotaxis I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MNQFESKKLRWKLTIGLELLTSILAVPLAVLFVISAGGYDFNQSIGLIISSTISLTTSFVVPSVRFVILGRLLKNLEDKN
WFILNSKEKSEIKTKILNFPLYNSWFYMIQWSYGIFAAWRIMHLFFVPKTIESLPFIFLPAIIYPVLGVSHFFLTESTLV
TLLESDRLGDVYTDPEKIKTVGIHTRIFSTISAIAILPIVILGYLLFEETSGWIKLGDVTIPLILTLMFMLIAVGVASFQ
LSSTIRRNSENMIQIFAKMSDGNLTQVLPTVSSDELGSNTRALSEFVKRLRIIVKRVSKEAVKLSESSKTLGENTSELSR
KMEDQAASSEEMSSAVEEISASIHSTASRAESQTLIAKKAQTSLAELEGRIRQVHSALVETKADADRMKGETKSGEEALK
GTQKAMEAIDESTTKMGATVNVIKEITDRIGLLSLNASIEAARAGEAGKGFAVVAQEIAKLGEQTQENAKRITSAISEAL
SATKSGREVIESMQTVFQRIGNTVGTTLDRISEVALLSDSQLTASEQVKSAFTEFSISSDEIRNHTQEQTKTSEEFSKTI
VSISETTEFLSSVVTQIDELSVRLNEQADKLKSEMNFFET

Sequences:

>Translated_600_residues
MNQFESKKLRWKLTIGLELLTSILAVPLAVLFVISAGGYDFNQSIGLIISSTISLTTSFVVPSVRFVILGRLLKNLEDKN
WFILNSKEKSEIKTKILNFPLYNSWFYMIQWSYGIFAAWRIMHLFFVPKTIESLPFIFLPAIIYPVLGVSHFFLTESTLV
TLLESDRLGDVYTDPEKIKTVGIHTRIFSTISAIAILPIVILGYLLFEETSGWIKLGDVTIPLILTLMFMLIAVGVASFQ
LSSTIRRNSENMIQIFAKMSDGNLTQVLPTVSSDELGSNTRALSEFVKRLRIIVKRVSKEAVKLSESSKTLGENTSELSR
KMEDQAASSEEMSSAVEEISASIHSTASRAESQTLIAKKAQTSLAELEGRIRQVHSALVETKADADRMKGETKSGEEALK
GTQKAMEAIDESTTKMGATVNVIKEITDRIGLLSLNASIEAARAGEAGKGFAVVAQEIAKLGEQTQENAKRITSAISEAL
SATKSGREVIESMQTVFQRIGNTVGTTLDRISEVALLSDSQLTASEQVKSAFTEFSISSDEIRNHTQEQTKTSEEFSKTI
VSISETTEFLSSVVTQIDELSVRLNEQADKLKSEMNFFET
>Mature_600_residues
MNQFESKKLRWKLTIGLELLTSILAVPLAVLFVISAGGYDFNQSIGLIISSTISLTTSFVVPSVRFVILGRLLKNLEDKN
WFILNSKEKSEIKTKILNFPLYNSWFYMIQWSYGIFAAWRIMHLFFVPKTIESLPFIFLPAIIYPVLGVSHFFLTESTLV
TLLESDRLGDVYTDPEKIKTVGIHTRIFSTISAIAILPIVILGYLLFEETSGWIKLGDVTIPLILTLMFMLIAVGVASFQ
LSSTIRRNSENMIQIFAKMSDGNLTQVLPTVSSDELGSNTRALSEFVKRLRIIVKRVSKEAVKLSESSKTLGENTSELSR
KMEDQAASSEEMSSAVEEISASIHSTASRAESQTLIAKKAQTSLAELEGRIRQVHSALVETKADADRMKGETKSGEEALK
GTQKAMEAIDESTTKMGATVNVIKEITDRIGLLSLNASIEAARAGEAGKGFAVVAQEIAKLGEQTQENAKRITSAISEAL
SATKSGREVIESMQTVFQRIGNTVGTTLDRISEVALLSDSQLTASEQVKSAFTEFSISSDEIRNHTQEQTKTSEEFSKTI
VSISETTEFLSSVVTQIDELSVRLNEQADKLKSEMNFFET

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=25.6198347107438, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=26.6187050359712, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI2367378, Length=314, Percent_Identity=26.1146496815287, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1789453, Length=393, Percent_Identity=24.9363867684478, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788194, Length=343, Percent_Identity=23.9067055393586, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 66277; Mature: 66277

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFESKKLRWKLTIGLELLTSILAVPLAVLFVISAGGYDFNQSIGLIISSTISLTTSFV
CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VPSVRFVILGRLLKNLEDKNWFILNSKEKSEIKTKILNFPLYNSWFYMIQWSYGIFAAWR
HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHH
IMHLFFVPKTIESLPFIFLPAIIYPVLGVSHFFLTESTLVTLLESDRLGDVYTDPEKIKT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VGIHTRIFSTISAIAILPIVILGYLLFEETSGWIKLGDVTIPLILTLMFMLIAVGVASFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSSTIRRNSENMIQIFAKMSDGNLTQVLPTVSSDELGSNTRALSEFVKRLRIIVKRVSKE
HHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVKLSESSKTLGENTSELSRKMEDQAASSEEMSSAVEEISASIHSTASRAESQTLIAKKA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTSLAELEGRIRQVHSALVETKADADRMKGETKSGEEALKGTQKAMEAIDESTTKMGATV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NVIKEITDRIGLLSLNASIEAARAGEAGKGFAVVAQEIAKLGEQTQENAKRITSAISEAL
HHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATKSGREVIESMQTVFQRIGNTVGTTLDRISEVALLSDSQLTASEQVKSAFTEFSISSD
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
EIRNHTQEQTKTSEEFSKTIVSISETTEFLSSVVTQIDELSVRLNEQADKLKSEMNFFET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQFESKKLRWKLTIGLELLTSILAVPLAVLFVISAGGYDFNQSIGLIISSTISLTTSFV
CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VPSVRFVILGRLLKNLEDKNWFILNSKEKSEIKTKILNFPLYNSWFYMIQWSYGIFAAWR
HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHH
IMHLFFVPKTIESLPFIFLPAIIYPVLGVSHFFLTESTLVTLLESDRLGDVYTDPEKIKT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VGIHTRIFSTISAIAILPIVILGYLLFEETSGWIKLGDVTIPLILTLMFMLIAVGVASFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSSTIRRNSENMIQIFAKMSDGNLTQVLPTVSSDELGSNTRALSEFVKRLRIIVKRVSKE
HHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVKLSESSKTLGENTSELSRKMEDQAASSEEMSSAVEEISASIHSTASRAESQTLIAKKA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTSLAELEGRIRQVHSALVETKADADRMKGETKSGEEALKGTQKAMEAIDESTTKMGATV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NVIKEITDRIGLLSLNASIEAARAGEAGKGFAVVAQEIAKLGEQTQENAKRITSAISEAL
HHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATKSGREVIESMQTVFQRIGNTVGTTLDRISEVALLSDSQLTASEQVKSAFTEFSISSD
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
EIRNHTQEQTKTSEEFSKTIVSISETTEFLSSVVTQIDELSVRLNEQADKLKSEMNFFET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]