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The map label for this gene is 45658254

Identifier: 45658254

GI number: 45658254

Start: 2919712

End: 2921229

Strand: Direct

Name: 45658254

Synonym: LIC12408

Alternate gene names: NA

Gene position: 2919712-2921229 (Clockwise)

Preceding gene: 45658251

Following gene: 45658255

Centisome position: 68.26

GC content: 32.54

Gene sequence:

>1518_bases
ATGTTTTTCAAGAAAAAGAGAGAAACTCTCTTTTTACTCCGTTTTAAGATCGAATTCGGAATCAAAGTAAAATTCCTTGA
AAGACAGGCAAGCTCTAAAATACACTACGGTTGCAGATTTTATCGTTTTTACAGTTCCATTGGCAACTCGCACAAATTTT
GTACAACATCCGTACCGATAATTTACATTCTGCATAAATATTGTTCAGCATTTGAGAAACTCATGAGACAAATTCATCTT
CTAACCGAAACGGAATTAAAACAAAGATTGGATCGAGAAACACTCGAGTCTTTATTTGAAAATTCTAGCCCGTCCGCTTT
AAAAGAATTTTCGATTCAATTAAAAATCTGGGCTCAAGAAAAAAATGCAAAATACTGGATCGAATTTCCAGATTCCATTT
TTGATAAGGTACAATTTCAAAAGTTCGAAAAGACGTTTTTCCGTTCTATCTCTCGACTTGGAGAAATTACATCCAAGTTT
CCATCTAAAATTTTTCCAGCATATGTTTGGGGGGAATCGTTTTACTTTCCATTTGTTTCGAACGAACAATCCACTGTGAT
TTCTAAAATTGCAAAAATCGAAGAAGTCATTGAACAGGTTTGTAAAAGAAAGAATCAAAAAATAAAGAGCACTTCCGTAT
TTAAACTTGAATTTCAAATTTTATCCGAAGATATTTTAACTCTGGAAAAAATATTAGAGTTTCCAATCCCAGAAAATTTT
ACGGAAAAGATATACGAAAGACAAGAAGGATTTTTTTTAGTCACTCCTAAATTAAACGGAGTTCAAAGTCTTTTTGCAAT
CTATCTATTCTCCAACATTTCCGAAAAAATCAAATTCAATTTTTCTAAACTACTCATCGATCTTTCCGAAAGTAAAGAAA
TTATACCTACTTTGTTTTCCCGTTCTGGTGCGATCATTTCCGCAATAGACTTTGAAAATTCTCCTAATTTCATCAAAGAC
AAAAACGGAAATTTTTACTATTTAGAGATCTCAGTTCCACCTTGGCTGAGTCCTTCGTTTTTATTTTTAGTTTTAGATTC
CACACTTTTGGATGTTTGGGAGAATTTAAATTTGGATCTACAAATTCCAACTTCCTTTCCTAGTTTCCAAAGAAATGAAT
CTTGGAGAGAACTCACCGAACATAGATTTGCTTCCCGAATTTCCAGACATATAGGGGAAGAAGAATCTTTTTTTCATTCG
ATTCTTCAAAGTGAATATGATACGGCTAGAAACATTTTTCTTTCTATTTTAGAAAACAAAAAGAAAAAATTAGAAGAATC
GGAAATTCCGGAACTCTTGAATCGTCTGAAGTCGATTCAAGAATTACTAACGATTTCTTTAGACGAAAACGTTCAAAAAG
ACTGGAAATCGATTCAAATCGAAATTTCAAATTCACTTTTGGAAAAATGGAAAGAAAAGAAAGAATTAGAAAATCAAAAA
ATAGCAGAGACTTTTTCGGTCTCCGCTTGGAAAATTCTGTTTGAAATTTGGAAATCTCAGGCCGGAAGGAAACCTTGA

Upstream 100 bases:

>100_bases
GTTCTCCTAATTGTTTTCGATTATAATCATGAATCTCTAATTCAAGCGTAGAGTCGTTTACACTTTTTGTGCAAATATTG
TACCAATGAATTGAAACTCG

Downstream 100 bases:

>100_bases
CAGTGCAATTCCCTCGAAAAAAATAGCACTGGAACCGATTGAATCGGGTCTCAACAAAGCGGCGACGTAGCTCAGCTGGT
TAGAGCAACGGAATCATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MFFKKKRETLFLLRFKIEFGIKVKFLERQASSKIHYGCRFYRFYSSIGNSHKFCTTSVPIIYILHKYCSAFEKLMRQIHL
LTETELKQRLDRETLESLFENSSPSALKEFSIQLKIWAQEKNAKYWIEFPDSIFDKVQFQKFEKTFFRSISRLGEITSKF
PSKIFPAYVWGESFYFPFVSNEQSTVISKIAKIEEVIEQVCKRKNQKIKSTSVFKLEFQILSEDILTLEKILEFPIPENF
TEKIYERQEGFFLVTPKLNGVQSLFAIYLFSNISEKIKFNFSKLLIDLSESKEIIPTLFSRSGAIISAIDFENSPNFIKD
KNGNFYYLEISVPPWLSPSFLFLVLDSTLLDVWENLNLDLQIPTSFPSFQRNESWRELTEHRFASRISRHIGEEESFFHS
ILQSEYDTARNIFLSILENKKKKLEESEIPELLNRLKSIQELLTISLDENVQKDWKSIQIEISNSLLEKWKEKKELENQK
IAETFSVSAWKILFEIWKSQAGRKP

Sequences:

>Translated_505_residues
MFFKKKRETLFLLRFKIEFGIKVKFLERQASSKIHYGCRFYRFYSSIGNSHKFCTTSVPIIYILHKYCSAFEKLMRQIHL
LTETELKQRLDRETLESLFENSSPSALKEFSIQLKIWAQEKNAKYWIEFPDSIFDKVQFQKFEKTFFRSISRLGEITSKF
PSKIFPAYVWGESFYFPFVSNEQSTVISKIAKIEEVIEQVCKRKNQKIKSTSVFKLEFQILSEDILTLEKILEFPIPENF
TEKIYERQEGFFLVTPKLNGVQSLFAIYLFSNISEKIKFNFSKLLIDLSESKEIIPTLFSRSGAIISAIDFENSPNFIKD
KNGNFYYLEISVPPWLSPSFLFLVLDSTLLDVWENLNLDLQIPTSFPSFQRNESWRELTEHRFASRISRHIGEEESFFHS
ILQSEYDTARNIFLSILENKKKKLEESEIPELLNRLKSIQELLTISLDENVQKDWKSIQIEISNSLLEKWKEKKELENQK
IAETFSVSAWKILFEIWKSQAGRKP
>Mature_505_residues
MFFKKKRETLFLLRFKIEFGIKVKFLERQASSKIHYGCRFYRFYSSIGNSHKFCTTSVPIIYILHKYCSAFEKLMRQIHL
LTETELKQRLDRETLESLFENSSPSALKEFSIQLKIWAQEKNAKYWIEFPDSIFDKVQFQKFEKTFFRSISRLGEITSKF
PSKIFPAYVWGESFYFPFVSNEQSTVISKIAKIEEVIEQVCKRKNQKIKSTSVFKLEFQILSEDILTLEKILEFPIPENF
TEKIYERQEGFFLVTPKLNGVQSLFAIYLFSNISEKIKFNFSKLLIDLSESKEIIPTLFSRSGAIISAIDFENSPNFIKD
KNGNFYYLEISVPPWLSPSFLFLVLDSTLLDVWENLNLDLQIPTSFPSFQRNESWRELTEHRFASRISRHIGEEESFFHS
ILQSEYDTARNIFLSILENKKKKLEESEIPELLNRLKSIQELLTISLDENVQKDWKSIQIEISNSLLEKWKEKKELENQK
IAETFSVSAWKILFEIWKSQAGRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59735; Mature: 59735

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00268 CECROPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKKKRETLFLLRFKIEFGIKVKFLERQASSKIHYGCRFYRFYSSIGNSHKFCTTSVPI
CCCCCCCCEEEEEEEEEEECCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHH
IYILHKYCSAFEKLMRQIHLLTETELKQRLDRETLESLFENSSPSALKEFSIQLKIWAQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEEEC
KNAKYWIEFPDSIFDKVQFQKFEKTFFRSISRLGEITSKFPSKIFPAYVWGESFYFPFVS
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCEEC
NEQSTVISKIAKIEEVIEQVCKRKNQKIKSTSVFKLEFQILSEDILTLEKILEFPIPENF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHH
TEKIYERQEGFFLVTPKLNGVQSLFAIYLFSNISEKIKFNFSKLLIDLSESKEIIPTLFS
HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHC
RSGAIISAIDFENSPNFIKDKNGNFYYLEISVPPWLSPSFLFLVLDSTLLDVWENLNLDL
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEE
QIPTSFPSFQRNESWRELTEHRFASRISRHIGEEESFFHSILQSEYDTARNIFLSILENK
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKKLEESEIPELLNRLKSIQELLTISLDENVQKDWKSIQIEISNSLLEKWKEKKELENQK
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH
IAETFSVSAWKILFEIWKSQAGRKP
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFFKKKRETLFLLRFKIEFGIKVKFLERQASSKIHYGCRFYRFYSSIGNSHKFCTTSVPI
CCCCCCCCEEEEEEEEEEECCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHH
IYILHKYCSAFEKLMRQIHLLTETELKQRLDRETLESLFENSSPSALKEFSIQLKIWAQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEEEC
KNAKYWIEFPDSIFDKVQFQKFEKTFFRSISRLGEITSKFPSKIFPAYVWGESFYFPFVS
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCEEC
NEQSTVISKIAKIEEVIEQVCKRKNQKIKSTSVFKLEFQILSEDILTLEKILEFPIPENF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHH
TEKIYERQEGFFLVTPKLNGVQSLFAIYLFSNISEKIKFNFSKLLIDLSESKEIIPTLFS
HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHC
RSGAIISAIDFENSPNFIKDKNGNFYYLEISVPPWLSPSFLFLVLDSTLLDVWENLNLDL
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEE
QIPTSFPSFQRNESWRELTEHRFASRISRHIGEEESFFHSILQSEYDTARNIFLSILENK
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKKLEESEIPELLNRLKSIQELLTISLDENVQKDWKSIQIEISNSLLEKWKEKKELENQK
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH
IAETFSVSAWKILFEIWKSQAGRKP
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA