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The map label for this gene is yahD [C]

Identifier: 45658239

GI number: 45658239

Start: 2899947

End: 2900930

Strand: Direct

Name: yahD [C]

Synonym: LIC12393

Alternate gene names: 45658239

Gene position: 2899947-2900930 (Clockwise)

Preceding gene: 45658232

Following gene: 45658244

Centisome position: 67.8

GC content: 38.52

Gene sequence:

>984_bases
TTGTTACACGAGTATCTTACGATGATTTCCAAAATTCATAACATTCCCTATTTTTTTTTAATGGTTCCGTTTTTTCTATT
GGCTGATCCGATTTTGGACAACGAATTTTTAAGATCCGTTCAAGAGGGAGATCCTAAAAAAACCCAACTTTTAATCCAAG
CGGGAGCATCTGTAGACGCAACCGATTCCAGGGGAAAAACCGCTTTGATGCTTGCAGATCATAGACCAGAAGTCGCCGAA
GTTCTCATCCGCGCCGGTGCAAACGTAAACGCTCAAGATAAGGATGGAAATTCAGTATTGATGGAAAGTTTATCTGGACT
TTTAGACGTAAAAGTTTTAGATATAGATGATCTCGCTGTTCCTAAACGATTGATTGAATCCGGAGCCAAGTTAGAATACA
TTTCTAAAATCAGCGATAACAAGACCATTTCCGTATCGATTTTAAACGTGGCTATACGTCGTGGAAATCTAGTATTGGTA
CAGTTTTTAGTAGACAATCACGCAGACGTAAACTTTGACAAAGGAAACCCGGAAGAATTCCCGCTCTTTCTTGCATGCGG
AGCAGGTTCCTCCACGGCTAATTTTGCAATCGTAGAATTTCTTTTGAAAAATAACGCAAAACCGGATTACACAAGTCGTC
TTCATGAAAAAAATCAAGACGGTAAACAAATCCAAGTGGGGGTAGACAACGCTCTTCATTTTCTTTCAGAAGAATCCAAT
ATAGACCCAAGAATCCCGGAACTTCTAGTAAAAAGTGGGACAAATTTAAATCATAGAAATGCGGAAGGGATCACTCCTCT
ATTGAAGTCCATACTAAAAAAGAGAATCTCCCTATCCGAAAAATTACTCGAACTCGGAGCCGATCCAAACATTGCGGACA
TACAAGGAAGAACTCCATTAGAAGAAGTAAGAAAACAAAAATTGACTGATCTAGAAACTTTGATTTTGAAAAAAATTGGG
ATAAACGAAAAGATTTCTCAGTAG

Upstream 100 bases:

>100_bases
AAAGAAAAGAGGGTCAAGATAAAAAGGAAGTTTTTAAGATTCCTGTAAAAAAGAAGTTCCCAAAATGTGGATATACACGT
CGCAAAAAATTCGATTTTAA

Downstream 100 bases:

>100_bases
TTTTTTAAGAGCAATCTACATAATAAAATCATAACGTGTGCAGGACGTAAGAAATCCGTTTTACCATAGGTCAATTTTTT
CGTAAAAAAATAAATGTGGG

Product: ankyrin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLHEYLTMISKIHNIPYFFLMVPFFLLADPILDNEFLRSVQEGDPKKTQLLIQAGASVDATDSRGKTALMLADHRPEVAE
VLIRAGANVNAQDKDGNSVLMESLSGLLDVKVLDIDDLAVPKRLIESGAKLEYISKISDNKTISVSILNVAIRRGNLVLV
QFLVDNHADVNFDKGNPEEFPLFLACGAGSSTANFAIVEFLLKNNAKPDYTSRLHEKNQDGKQIQVGVDNALHFLSEESN
IDPRIPELLVKSGTNLNHRNAEGITPLLKSILKKRISLSEKLLELGADPNIADIQGRTPLEEVRKQKLTDLETLILKKIG
INEKISQ

Sequences:

>Translated_327_residues
MLHEYLTMISKIHNIPYFFLMVPFFLLADPILDNEFLRSVQEGDPKKTQLLIQAGASVDATDSRGKTALMLADHRPEVAE
VLIRAGANVNAQDKDGNSVLMESLSGLLDVKVLDIDDLAVPKRLIESGAKLEYISKISDNKTISVSILNVAIRRGNLVLV
QFLVDNHADVNFDKGNPEEFPLFLACGAGSSTANFAIVEFLLKNNAKPDYTSRLHEKNQDGKQIQVGVDNALHFLSEESN
IDPRIPELLVKSGTNLNHRNAEGITPLLKSILKKRISLSEKLLELGADPNIADIQGRTPLEEVRKQKLTDLETLILKKIG
INEKISQ
>Mature_327_residues
MLHEYLTMISKIHNIPYFFLMVPFFLLADPILDNEFLRSVQEGDPKKTQLLIQAGASVDATDSRGKTALMLADHRPEVAE
VLIRAGANVNAQDKDGNSVLMESLSGLLDVKVLDIDDLAVPKRLIESGAKLEYISKISDNKTISVSILNVAIRRGNLVLV
QFLVDNHADVNFDKGNPEEFPLFLACGAGSSTANFAIVEFLLKNNAKPDYTSRLHEKNQDGKQIQVGVDNALHFLSEESN
IDPRIPELLVKSGTNLNHRNAEGITPLLKSILKKRISLSEKLLELGADPNIADIQGRTPLEEVRKQKLTDLETLILKKIG
INEKISQ

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI268607595, Length=279, Percent_Identity=28.3154121863799, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI62988328, Length=279, Percent_Identity=28.3154121863799, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI46519147, Length=278, Percent_Identity=27.6978417266187, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI37620163, Length=278, Percent_Identity=27.6978417266187, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI188595682, Length=281, Percent_Identity=27.0462633451957, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI68131557, Length=291, Percent_Identity=25.4295532646048, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI52426737, Length=281, Percent_Identity=27.0462633451957, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21356741, Length=260, Percent_Identity=31.5384615384615, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650843, Length=298, Percent_Identity=25.8389261744966, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 36178; Mature: 36178

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHEYLTMISKIHNIPYFFLMVPFFLLADPILDNEFLRSVQEGDPKKTQLLIQAGASVDA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHEEEEECCCCCCC
TDSRGKTALMLADHRPEVAEVLIRAGANVNAQDKDGNSVLMESLSGLLDVKVLDIDDLAV
CCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHH
PKRLIESGAKLEYISKISDNKTISVSILNVAIRRGNLVLVQFLVDNHADVNFDKGNPEEF
HHHHHHCCCCEEHHHHCCCCCEEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCCCCCCC
PLFLACGAGSSTANFAIVEFLLKNNAKPDYTSRLHEKNQDGKQIQVGVDNALHFLSEESN
CEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
IDPRIPELLVKSGTNLNHRNAEGITPLLKSILKKRISLSEKLLELGADPNIADIQGRTPL
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EEVRKQKLTDLETLILKKIGINEKISQ
HHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MLHEYLTMISKIHNIPYFFLMVPFFLLADPILDNEFLRSVQEGDPKKTQLLIQAGASVDA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHEEEEECCCCCCC
TDSRGKTALMLADHRPEVAEVLIRAGANVNAQDKDGNSVLMESLSGLLDVKVLDIDDLAV
CCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHH
PKRLIESGAKLEYISKISDNKTISVSILNVAIRRGNLVLVQFLVDNHADVNFDKGNPEEF
HHHHHHCCCCEEHHHHCCCCCEEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCCCCCCC
PLFLACGAGSSTANFAIVEFLLKNNAKPDYTSRLHEKNQDGKQIQVGVDNALHFLSEESN
CEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
IDPRIPELLVKSGTNLNHRNAEGITPLLKSILKKRISLSEKLLELGADPNIADIQGRTPL
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EEVRKQKLTDLETLILKKIGINEKISQ
HHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA