Click here to switch to the map view.

The map label for this gene is 45658209

Identifier: 45658209

GI number: 45658209

Start: 2863315

End: 2863866

Strand: Reverse

Name: 45658209

Synonym: LIC12363

Alternate gene names: NA

Gene position: 2863866-2863315 (Counterclockwise)

Preceding gene: 45658211

Following gene: 45658207

Centisome position: 66.96

GC content: 28.62

Gene sequence:

>552_bases
ATGTACAAAAATCAAAAAAGAGCCAATGGAGTTTTTTGTAAAACTCTTTATAAGAAATATCTTTTTTTGATTTTTATTTT
ACCGTTAGACGCAACTTTTTCGGAACCTTTAGACAATTTTGCGTTCTATAATCTTAGTAAAGAAAGAATTGTTCTTTCTG
ATTTTTTAAAAAAGTTTTCTACAAAAGACATTCTGATACTAAATTTTACTGGTTCTCAATGTAAACCTTGTAAAGAGCAA
GTTCCGATTCTTTTAGATCTTATAAAAAGAACAAACATAGAGGCCGATGGGAAATGGAAGGTATTTTTTTGGATCGTATT
TGTAGGAGATGATTTTCAAACCGGAAAAGAATATTCAAATTTACTAAATCTATCAAATAAGGCGGAAACGTTGGTAGATC
CGTTATCTACTAGTTATAAACGAGTTAAAATTGTTGGTTTGCCTACTGTTTTAATTTTAAATTCGAAACGTGAAATTTTT
TTTAAAACTGAGGGATATAACCAATCTGGAATGAACGATTTAAAAAAATTTTTATCTTCTTGGGGAAAGTAG

Upstream 100 bases:

>100_bases
GCTGAACTTGATCGAAAAGTAAACAATAATTTAAAGTTCTAAAAATAGTATTTACAATCTTTTCAGATGAAAACGATTAG
AATTTCGGAAATCAAAACGA

Downstream 100 bases:

>100_bases
GATCAAAATTTAATATTATTTTCTTGAATGTAGGAATGCCAGAGCAACATAGTGGCGATCGAGCGGAATGGTCTCCAAGA
TTTAGAAACAGACAGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MYKNQKRANGVFCKTLYKKYLFLIFILPLDATFSEPLDNFAFYNLSKERIVLSDFLKKFSTKDILILNFTGSQCKPCKEQ
VPILLDLIKRTNIEADGKWKVFFWIVFVGDDFQTGKEYSNLLNLSNKAETLVDPLSTSYKRVKIVGLPTVLILNSKREIF
FKTEGYNQSGMNDLKKFLSSWGK

Sequences:

>Translated_183_residues
MYKNQKRANGVFCKTLYKKYLFLIFILPLDATFSEPLDNFAFYNLSKERIVLSDFLKKFSTKDILILNFTGSQCKPCKEQ
VPILLDLIKRTNIEADGKWKVFFWIVFVGDDFQTGKEYSNLLNLSNKAETLVDPLSTSYKRVKIVGLPTVLILNSKREIF
FKTEGYNQSGMNDLKKFLSSWGK
>Mature_183_residues
MYKNQKRANGVFCKTLYKKYLFLIFILPLDATFSEPLDNFAFYNLSKERIVLSDFLKKFSTKDILILNFTGSQCKPCKEQ
VPILLDLIKRTNIEADGKWKVFFWIVFVGDDFQTGKEYSNLLNLSNKAETLVDPLSTSYKRVKIVGLPTVLILNSKREIF
FKTEGYNQSGMNDLKKFLSSWGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21228; Mature: 21228

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKNQKRANGVFCKTLYKKYLFLIFILPLDATFSEPLDNFAFYNLSKERIVLSDFLKKFS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHEEECCCCCEEHHHHHHHHHC
TKDILILNFTGSQCKPCKEQVPILLDLIKRTNIEADGKWKVFFWIVFVGDDFQTGKEYSN
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHH
LLNLSNKAETLVDPLSTSYKRVKIVGLPTVLILNSKREIFFKTEGYNQSGMNDLKKFLSS
HHCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHH
WGK
CCC
>Mature Secondary Structure
MYKNQKRANGVFCKTLYKKYLFLIFILPLDATFSEPLDNFAFYNLSKERIVLSDFLKKFS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHEEECCCCCEEHHHHHHHHHC
TKDILILNFTGSQCKPCKEQVPILLDLIKRTNIEADGKWKVFFWIVFVGDDFQTGKEYSN
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHH
LLNLSNKAETLVDPLSTSYKRVKIVGLPTVLILNSKREIFFKTEGYNQSGMNDLKKFLSS
HHCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHH
WGK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA