Click here to switch to the map view.

The map label for this gene is yrhL

Identifier: 45658201

GI number: 45658201

Start: 2851409

End: 2852620

Strand: Reverse

Name: yrhL

Synonym: LIC12355

Alternate gene names: 45658201

Gene position: 2852620-2851409 (Counterclockwise)

Preceding gene: 45658202

Following gene: 45658200

Centisome position: 66.69

GC content: 31.52

Gene sequence:

>1212_bases
ATGAAAGCTTTTATTAAAGGACTTTGGTATCATCGAGAAGATGAAATTCAATCTTTAAATGGATTACGTGCCTTTGCAAT
TATTTTGGTCATTTTAAACCATTATGCGCTTGTCTGGAAAAAGCCCGGTACATTTCAATCCGATTCTCTTTTTTGGTCGG
GAGTCGATTTATCTTTTGTTCTCAGCGGTTTTTTAATATCAAAAAGCCTTTTGAGTGATTGGACTCGAAACGCAACGATC
GATTTTAAAAAATTTTATTTGAAACGTACTCTTAGAATTTTTCCTGCTTATTATGTTTTTATTACATTTAGTTGGGTTGC
TTCCAAACTTACTCTTAAAATCGCAGAGGCAAAAGGACTGGAAAAAGAGGCATATTATTTTTCTTTTAAATTATCCGATG
CGTGGGGAGATTTTGTATTTTTAGGAAATTACTTTCCTGGAATCAATATTCATACTTGGTCTTTATCCATAGAAGAACAG
TTCTATTTGATTTTTCCGCTTTTTTGTAGTTTGATCTTATTTAAAATGTCTTCAAAATACAGACAACTTTTGCTTTGGAG
TTTGCTCTTAGTTCCTACGATTAGCCGTGTGATCGTTTATATGACGACTCCTTTACCTTTGACTCCTGAATATTTTAACG
AGATTTATTTTCCTTTTCATACTCGATTTGATTCTTTGGTGATAGGTGTGATTGTGATGGATCTGTATATGAATCAAAAA
GGTTTGATAAATCGATTAAAAACAAATCCTATTTTATATTACCTTCTTTTATTTTTATTTTTTTCTTTCTTATGTATTTC
GCATTGGGCAAATATAAATATGGAAAGTTTTTTTACTCATACGTTTAAGTATAATCTTTTGAATATAGGATTTGCTGGAA
TTTTGTTGTGCGCGGTCGTTCGTTCAGAGGGTTTGTTAGGGCGTTTTTTAAGTTTAAAAATTTTTGTTCCGATCGCTAGA
TTAAGTTTTACAATTTATCTTTGGCATTTGGTCCTGATTGCAGTTTCTGTATCGATTTTAAAAATTCGTACGGAACCTAG
TTCCATGTTTGAACTTTTATTTCAGTTTATTTTTGTGTTGACCCTGATGATTCTTCTTTCAGTTCCTTTTTATCTTTTAT
TTGAATACCCGTTTCAATATTTAAGAACAAGAATTCTTCCTAAAAGAAGATCTCACAAACAATTACTTTCGGTTCAACCC
AAGTCCTTTTGA

Upstream 100 bases:

>100_bases
AAACAATTCGTGAATAATTTTGTTTCTTAAAATGTTAAATATATTAAACAATCAGTGGTTTTACGGATGAAAAAAAATTT
AATCAGAGATTCAAAAAGTC

Downstream 100 bases:

>100_bases
TTTTTAGACTTTAGAATGGTTTGTCTAAAATCCTTGCGGTTTTATTTTTTCTATGAACAATCTTTCTTACTGATTTTTAT
TTAACTTCAGTTCAGTATCA

Product: cell surface saccharide acetylase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKAFIKGLWYHREDEIQSLNGLRAFAIILVILNHYALVWKKPGTFQSDSLFWSGVDLSFVLSGFLISKSLLSDWTRNATI
DFKKFYLKRTLRIFPAYYVFITFSWVASKLTLKIAEAKGLEKEAYYFSFKLSDAWGDFVFLGNYFPGINIHTWSLSIEEQ
FYLIFPLFCSLILFKMSSKYRQLLLWSLLLVPTISRVIVYMTTPLPLTPEYFNEIYFPFHTRFDSLVIGVIVMDLYMNQK
GLINRLKTNPILYYLLLFLFFSFLCISHWANINMESFFTHTFKYNLLNIGFAGILLCAVVRSEGLLGRFLSLKIFVPIAR
LSFTIYLWHLVLIAVSVSILKIRTEPSSMFELLFQFIFVLTLMILLSVPFYLLFEYPFQYLRTRILPKRRSHKQLLSVQP
KSF

Sequences:

>Translated_403_residues
MKAFIKGLWYHREDEIQSLNGLRAFAIILVILNHYALVWKKPGTFQSDSLFWSGVDLSFVLSGFLISKSLLSDWTRNATI
DFKKFYLKRTLRIFPAYYVFITFSWVASKLTLKIAEAKGLEKEAYYFSFKLSDAWGDFVFLGNYFPGINIHTWSLSIEEQ
FYLIFPLFCSLILFKMSSKYRQLLLWSLLLVPTISRVIVYMTTPLPLTPEYFNEIYFPFHTRFDSLVIGVIVMDLYMNQK
GLINRLKTNPILYYLLLFLFFSFLCISHWANINMESFFTHTFKYNLLNIGFAGILLCAVVRSEGLLGRFLSLKIFVPIAR
LSFTIYLWHLVLIAVSVSILKIRTEPSSMFELLFQFIFVLTLMILLSVPFYLLFEYPFQYLRTRILPKRRSHKQLLSVQP
KSF
>Mature_403_residues
MKAFIKGLWYHREDEIQSLNGLRAFAIILVILNHYALVWKKPGTFQSDSLFWSGVDLSFVLSGFLISKSLLSDWTRNATI
DFKKFYLKRTLRIFPAYYVFITFSWVASKLTLKIAEAKGLEKEAYYFSFKLSDAWGDFVFLGNYFPGINIHTWSLSIEEQ
FYLIFPLFCSLILFKMSSKYRQLLLWSLLLVPTISRVIVYMTTPLPLTPEYFNEIYFPFHTRFDSLVIGVIVMDLYMNQK
GLINRLKTNPILYYLLLFLFFSFLCISHWANINMESFFTHTFKYNLLNIGFAGILLCAVVRSEGLLGRFLSLKIFVPIAR
LSFTIYLWHLVLIAVSVSILKIRTEPSSMFELLFQFIFVLTLMILLSVPFYLLFEYPFQYLRTRILPKRRSHKQLLSVQP
KSF

Specific function: Unknown

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24643305, Length=407, Percent_Identity=23.3415233415233, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24643303, Length=411, Percent_Identity=24.8175182481752, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656
- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 47414; Mature: 47414

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFIKGLWYHREDEIQSLNGLRAFAIILVILNHYALVWKKPGTFQSDSLFWSGVDLSFV
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCCCHHHH
LSGFLISKSLLSDWTRNATIDFKKFYLKRTLRIFPAYYVFITFSWVASKLTLKIAEAKGL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCC
EKEAYYFSFKLSDAWGDFVFLGNYFPGINIHTWSLSIEEQFYLIFPLFCSLILFKMSSKY
CCCEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
RQLLLWSLLLVPTISRVIVYMTTPLPLTPEYFNEIYFPFHTRFDSLVIGVIVMDLYMNQK
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCH
GLINRLKTNPILYYLLLFLFFSFLCISHWANINMESFFTHTFKYNLLNIGFAGILLCAVV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHH
RSEGLLGRFLSLKIFVPIARLSFTIYLWHLVLIAVSVSILKIRTEPSSMFELLFQFIFVL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH
TLMILLSVPFYLLFEYPFQYLRTRILPKRRSHKQLLSVQPKSF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKAFIKGLWYHREDEIQSLNGLRAFAIILVILNHYALVWKKPGTFQSDSLFWSGVDLSFV
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCCCHHHH
LSGFLISKSLLSDWTRNATIDFKKFYLKRTLRIFPAYYVFITFSWVASKLTLKIAEAKGL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCC
EKEAYYFSFKLSDAWGDFVFLGNYFPGINIHTWSLSIEEQFYLIFPLFCSLILFKMSSKY
CCCEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
RQLLLWSLLLVPTISRVIVYMTTPLPLTPEYFNEIYFPFHTRFDSLVIGVIVMDLYMNQK
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCH
GLINRLKTNPILYYLLLFLFFSFLCISHWANINMESFFTHTFKYNLLNIGFAGILLCAVV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHH
RSEGLLGRFLSLKIFVPIARLSFTIYLWHLVLIAVSVSILKIRTEPSSMFELLFQFIFVL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH
TLMILLSVPFYLLFEYPFQYLRTRILPKRRSHKQLLSVQPKSF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]