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The map label for this gene is 45658200

Identifier: 45658200

GI number: 45658200

Start: 2849874

End: 2851055

Strand: Reverse

Name: 45658200

Synonym: LIC12354

Alternate gene names: NA

Gene position: 2851055-2849874 (Counterclockwise)

Preceding gene: 45658201

Following gene: 45658195

Centisome position: 66.66

GC content: 36.38

Gene sequence:

>1182_bases
ATGAAAGTAGTTCAAATTAAATTATCTTTTATTTCTCGGAAATTTCAAAAATATTCTAAAATTATAATGTTAATTTTGAT
TTGTTTTGTGTGCGTTCTATATGACTCATTATCAGGAGAAACTAAAAAGCCTGCTTATTCTACAGAAGACCTTTCAAAAT
CTCAATATAAGTCCGAAAAAATTCCTGTTTATCAAAACCGTTTTGGAAGAACTCGTCCAGTGGTAGCGGTGATCGGAGAT
AATTACATGACGGAATTGACAGATTATGTGGTTCCTTATGGTGTATTGACTCGTTCAAAATCGGCGGAAGTGTTTGCAGT
CGGAATTTCGTTAACTCCAATAAGTTTTTACCCAGCTTTAAAGATTTTTCCTCAAGAATCGATTTCTTCTTTTGATAAGA
AATTTTCTACAGGTGCGGATTACGTGATTGTTCCAGCTATACATCATTCTGAAAATCCAATTATTTTAGAATGGTTGAAT
TTACAAGCTTCCAGAGGTGCAACCATTATCGGGGTTTGTGACGGAGTTTGGGTACTTGCAAACGCAGGTTTATTAAAAGG
AAAACGGGCCACAGGTTTTTGGTATTCATTAGATGATTTGGAAAAAAAATTCAAAGATACGACTTGGGTCAGAAATAGAC
GTTATGTGGTAGATCAAGGAATCGTAACTACAACTGCCGTGACCGCATCGATTCCGGTTTCTTTGGCTTTGGTGGAAGCG
ATCGCAGGTAAGGATAGAGCTTTCAACGTTGCGGTAGAATTGGGAGTGCAAGACTGGAGTCCAGTTCATGATAGTAATCG
ATTTCGCTTAACAATGAGTTCGGTTTATACGGTTGTTTCCAATTTCTTATCTTTTTGGTCGTATGAAAAAATAGGAATTC
CGGTTATGGCAGGTGTGGATGAAATTAAATTGGCTTTGGTAGCTGACGCGTATTCTAGAACATATCGTTCTCAAGCTTTT
TCAATTGCAAAATCAGAAAAAACAATTCTAACTTCAAACGGGTTAAGGCTAATTCCCGATATAGTTTTTGGTTCTACAAC
TTCATTGAGTCGAATATTACCAGTGTTCGATTCTACTCCTGCCGTGATTACACTGGATCAAACTCTTCTAAAAATTGGGG
AAATTTATGGACGTTCCACAGCTGATTTTGTAGCTCTCATATTAGAATATCCTTATTTTTAA

Upstream 100 bases:

>100_bases
TATCTGTCTTTTGAGAATAAAATGAAAGATGTTCTGTTGTAAACTATTGGTAAGATTTAAAAGAAAGGATCAAAGTTTTG
ATTTGGGTTGAGATAAAAAT

Downstream 100 bases:

>100_bases
ATGTACTAAAATTGTTGTAATTGGTCTAGGTTTGTATTTTAAGTAACGTGAGTTCGAAGTAAGAAAATTTGGGTGAATCC
GGCTTGCAGCAGACAGCCGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; AraC Family Transcription Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; Transcriptional Regulator SyrB; Intracellular Protease/Amidase; ThiJ/PfpI; Transcription Regulator Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKVVQIKLSFISRKFQKYSKIIMLILICFVCVLYDSLSGETKKPAYSTEDLSKSQYKSEKIPVYQNRFGRTRPVVAVIGD
NYMTELTDYVVPYGVLTRSKSAEVFAVGISLTPISFYPALKIFPQESISSFDKKFSTGADYVIVPAIHHSENPIILEWLN
LQASRGATIIGVCDGVWVLANAGLLKGKRATGFWYSLDDLEKKFKDTTWVRNRRYVVDQGIVTTTAVTASIPVSLALVEA
IAGKDRAFNVAVELGVQDWSPVHDSNRFRLTMSSVYTVVSNFLSFWSYEKIGIPVMAGVDEIKLALVADAYSRTYRSQAF
SIAKSEKTILTSNGLRLIPDIVFGSTTSLSRILPVFDSTPAVITLDQTLLKIGEIYGRSTADFVALILEYPYF

Sequences:

>Translated_393_residues
MKVVQIKLSFISRKFQKYSKIIMLILICFVCVLYDSLSGETKKPAYSTEDLSKSQYKSEKIPVYQNRFGRTRPVVAVIGD
NYMTELTDYVVPYGVLTRSKSAEVFAVGISLTPISFYPALKIFPQESISSFDKKFSTGADYVIVPAIHHSENPIILEWLN
LQASRGATIIGVCDGVWVLANAGLLKGKRATGFWYSLDDLEKKFKDTTWVRNRRYVVDQGIVTTTAVTASIPVSLALVEA
IAGKDRAFNVAVELGVQDWSPVHDSNRFRLTMSSVYTVVSNFLSFWSYEKIGIPVMAGVDEIKLALVADAYSRTYRSQAF
SIAKSEKTILTSNGLRLIPDIVFGSTTSLSRILPVFDSTPAVITLDQTLLKIGEIYGRSTADFVALILEYPYF
>Mature_393_residues
MKVVQIKLSFISRKFQKYSKIIMLILICFVCVLYDSLSGETKKPAYSTEDLSKSQYKSEKIPVYQNRFGRTRPVVAVIGD
NYMTELTDYVVPYGVLTRSKSAEVFAVGISLTPISFYPALKIFPQESISSFDKKFSTGADYVIVPAIHHSENPIILEWLN
LQASRGATIIGVCDGVWVLANAGLLKGKRATGFWYSLDDLEKKFKDTTWVRNRRYVVDQGIVTTTAVTASIPVSLALVEA
IAGKDRAFNVAVELGVQDWSPVHDSNRFRLTMSSVYTVVSNFLSFWSYEKIGIPVMAGVDEIKLALVADAYSRTYRSQAF
SIAKSEKTILTSNGLRLIPDIVFGSTTSLSRILPVFDSTPAVITLDQTLLKIGEIYGRSTADFVALILEYPYF

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43791; Mature: 43791

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVQIKLSFISRKFQKYSKIIMLILICFVCVLYDSLSGETKKPAYSTEDLSKSQYKSEK
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCC
IPVYQNRFGRTRPVVAVIGDNYMTELTDYVVPYGVLTRSKSAEVFAVGISLTPISFYPAL
CCHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHEECCCCCEEEEEEEEECCEECCCCE
KIFPQESISSFDKKFSTGADYVIVPAIHHSENPIILEWLNLQASRGATIIGVCDGVWVLA
EECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEC
NAGLLKGKRATGFWYSLDDLEKKFKDTTWVRNRRYVVDQGIVTTTAVTASIPVSLALVEA
CCCEECCCCCCCEEEEHHHHHHHHCCHHHHCCCEEEEECCCEEEEEEEHHCCHHHHHHHH
IAGKDRAFNVAVELGVQDWSPVHDSNRFRLTMSSVYTVVSNFLSFWSYEKIGIPVMAGVD
HCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EIKLALVADAYSRTYRSQAFSIAKSEKTILTSNGLRLIPDIVFGSTTSLSRILPVFDSTP
HHEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECHHHCCCCCCHHHHHHHCCCCC
AVITLDQTLLKIGEIYGRSTADFVALILEYPYF
CEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVVQIKLSFISRKFQKYSKIIMLILICFVCVLYDSLSGETKKPAYSTEDLSKSQYKSEK
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCC
IPVYQNRFGRTRPVVAVIGDNYMTELTDYVVPYGVLTRSKSAEVFAVGISLTPISFYPAL
CCHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHEECCCCCEEEEEEEEECCEECCCCE
KIFPQESISSFDKKFSTGADYVIVPAIHHSENPIILEWLNLQASRGATIIGVCDGVWVLA
EECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEC
NAGLLKGKRATGFWYSLDDLEKKFKDTTWVRNRRYVVDQGIVTTTAVTASIPVSLALVEA
CCCEECCCCCCCEEEEHHHHHHHHCCHHHHCCCEEEEECCCEEEEEEEHHCCHHHHHHHH
IAGKDRAFNVAVELGVQDWSPVHDSNRFRLTMSSVYTVVSNFLSFWSYEKIGIPVMAGVD
HCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EIKLALVADAYSRTYRSQAFSIAKSEKTILTSNGLRLIPDIVFGSTTSLSRILPVFDSTP
HHEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECHHHCCCCCCHHHHHHHCCCCC
AVITLDQTLLKIGEIYGRSTADFVALILEYPYF
CEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA