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The map label for this gene is 45658170

Identifier: 45658170

GI number: 45658170

Start: 2800414

End: 2802195

Strand: Direct

Name: 45658170

Synonym: LIC12322

Alternate gene names: NA

Gene position: 2800414-2802195 (Clockwise)

Preceding gene: 45658166

Following gene: 304570499

Centisome position: 65.47

GC content: 41.08

Gene sequence:

>1782_bases
TTGGAAAAAAACGCGAAGATCTTTCAAAATCCTGACGAGATGATCCGTGAAACGGTGCAACCTAAAATGTATCTGCACCT
TTCTGCGACCATGTCCAGACCAAACGCTCTTATTTATTCTCTCGCTCGTTGTTTTCAAAATTCAAATCCAGAATTTATAA
TTAGTATGGCAGGAATCCATTCCAGTGCACACGCTCTTACAATCTCTAAAGTAGTAAAAAAAATGATCACCGGTTTTGCC
GGAGATAATTATCCTAAACCTGCTCCTAATTCATTATATTCTAATTTATTGGAAGGAAAACCGTTCGAACTGGAACTCTG
GTCTCTACTCAGTATCGTTCAAAGATTGATGGCCGGAGCGATGCGCCTTCCAGGTTTTATCACCAATTCCCTTTTAGGTA
GCGATCTAATTTTAGATAAGTTAGGCAAAACGGCTTTTTTACTTCCAGATCCAAAACACCAAGGTATCAATGGCTCCCAT
TCTCCGAATTATAAAGGTAAAAAAGGAGTGGATCTAGTTTATATTCTTCCCTTAAACCCAGACCTTACACTTTTACACGC
TGTGGTTGGAGACGAAGAAGGAAATTTAGTTCTTTGTCCTCCCTGCGGAGAAGGTTACTGGGGAGCACTTTCCGCCAAAC
AAGGTGTAGTCGCTACCGTAGAAAAGATCGTTCCTAAAGGTTCCATTCCTCCAGAGCTTGTTTCGATTCCAGGAAATCGA
GTCAAAGCAATTTCCATCGCTGAATTCGGGGCCCATCCTCAATCTCTTAGAGTCTATAACCTTTCCGGAATCCCAGCTTT
CGCTGGACTTTCTACGTATTTAGATGATTACGAATTTCAGATAGAAGCGAACGAAGCCGCCAACGCCCCTTCTCGTGCCG
AAAAATGGTATGCAGATTTTGTAAACCTAAAGGGTGGTCATGCAGAATATTTAGAACGTATAGGAATTTCTCGTCTTAAA
AGACTAAAACAAATTCCCAAAGAGAACAAAGTAACTAAATTAGAGGATCCAAAAACCGTAAACGACTCTGAACAAATGAT
AATCTTGGCTGCGAGAGCGATTCAAGAATACGTCAAATCTAATGGTTACAAAACGATCCTAGCTGGTATCGGTGCAGCTC
ATATTTCCGCTTGGACCGCTGCTCGTTTTTTAGAGAAAGAAGGGATTGAAGTTAAGATCATCACAGAATTAGGTTTTTTT
TCTATGAAACCACATACCGGAGATGTTTTTCTTTTTAGCCAACTACATGCAAAAGACTGTACTATGCTTTCTGACATCAC
AAGTATTTTAGGAACAGTAGTACCAGATCATTGTCTAGGAGTGTTAGGAGCCGCAGAAGTGGATTGGTTCGGTAACATCA
ACTCTACTAAAACTTCTAAGGGAAAATTTTTAGTTGGTTCGGGAGGAGCCAACGATATAGCCGCAGTCGCAGATTGTATC
GTAGTTGCCAAGGCAAACCGAGGAAGATTCGTAAAACATGTAAACTATATTACCTCGGTAGGAGACAGAGTTATGGAAGC
AGTCTGTCAATTTGGAAGATTTCAAAGAACTCCAAATTCGGATCATGTTTTCGAATTCTCACACTGGATCTCACCTCCTT
CCGACGAAGAGATGGAACCTGAAGAAGCAGTACTACGCTATACTTCCTGGCTTCCTCCGGACGAGGATATTCCTCTCAAA
CACGAACCTCCCGTGACCGCGGAAGAACTGACTGTTTTACGCGAATTAGATCCAGAAAAGATTTACATAGAACAATTTAT
GGTATATACAAGACTTCCATAA

Upstream 100 bases:

>100_bases
TAATATTACTTTTTTCTTTTAGGCGCAGTACGGGAGGTTCGCTCCTAATCGGAAATTTTAAACGAATCATCTTCATACTG
ATTGGGAAGTATAGAATTCA

Downstream 100 bases:

>100_bases
TAAAATGATATTCGAATTTACTAGAGGCCCCTTATGAGTGGAAAAAATCAGAGCGGTATCCAAATCACCGGATTCGGTCA
CTATCTTCCAGAAAAAATCG

Product: glutaconate CoA transferase-like protein

Products: succinate; 3-oxoacyl-CoA

Alternate protein names: Acetate CoA-Transferase; CoA-Transferase Alpha Subunit; 3-Oxoadipate CoA-Transferase Alpha Subunit

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MEKNAKIFQNPDEMIRETVQPKMYLHLSATMSRPNALIYSLARCFQNSNPEFIISMAGIHSSAHALTISKVVKKMITGFA
GDNYPKPAPNSLYSNLLEGKPFELELWSLLSIVQRLMAGAMRLPGFITNSLLGSDLILDKLGKTAFLLPDPKHQGINGSH
SPNYKGKKGVDLVYILPLNPDLTLLHAVVGDEEGNLVLCPPCGEGYWGALSAKQGVVATVEKIVPKGSIPPELVSIPGNR
VKAISIAEFGAHPQSLRVYNLSGIPAFAGLSTYLDDYEFQIEANEAANAPSRAEKWYADFVNLKGGHAEYLERIGISRLK
RLKQIPKENKVTKLEDPKTVNDSEQMIILAARAIQEYVKSNGYKTILAGIGAAHISAWTAARFLEKEGIEVKIITELGFF
SMKPHTGDVFLFSQLHAKDCTMLSDITSILGTVVPDHCLGVLGAAEVDWFGNINSTKTSKGKFLVGSGGANDIAAVADCI
VVAKANRGRFVKHVNYITSVGDRVMEAVCQFGRFQRTPNSDHVFEFSHWISPPSDEEMEPEEAVLRYTSWLPPDEDIPLK
HEPPVTAEELTVLRELDPEKIYIEQFMVYTRLP

Sequences:

>Translated_593_residues
MEKNAKIFQNPDEMIRETVQPKMYLHLSATMSRPNALIYSLARCFQNSNPEFIISMAGIHSSAHALTISKVVKKMITGFA
GDNYPKPAPNSLYSNLLEGKPFELELWSLLSIVQRLMAGAMRLPGFITNSLLGSDLILDKLGKTAFLLPDPKHQGINGSH
SPNYKGKKGVDLVYILPLNPDLTLLHAVVGDEEGNLVLCPPCGEGYWGALSAKQGVVATVEKIVPKGSIPPELVSIPGNR
VKAISIAEFGAHPQSLRVYNLSGIPAFAGLSTYLDDYEFQIEANEAANAPSRAEKWYADFVNLKGGHAEYLERIGISRLK
RLKQIPKENKVTKLEDPKTVNDSEQMIILAARAIQEYVKSNGYKTILAGIGAAHISAWTAARFLEKEGIEVKIITELGFF
SMKPHTGDVFLFSQLHAKDCTMLSDITSILGTVVPDHCLGVLGAAEVDWFGNINSTKTSKGKFLVGSGGANDIAAVADCI
VVAKANRGRFVKHVNYITSVGDRVMEAVCQFGRFQRTPNSDHVFEFSHWISPPSDEEMEPEEAVLRYTSWLPPDEDIPLK
HEPPVTAEELTVLRELDPEKIYIEQFMVYTRLP
>Mature_593_residues
MEKNAKIFQNPDEMIRETVQPKMYLHLSATMSRPNALIYSLARCFQNSNPEFIISMAGIHSSAHALTISKVVKKMITGFA
GDNYPKPAPNSLYSNLLEGKPFELELWSLLSIVQRLMAGAMRLPGFITNSLLGSDLILDKLGKTAFLLPDPKHQGINGSH
SPNYKGKKGVDLVYILPLNPDLTLLHAVVGDEEGNLVLCPPCGEGYWGALSAKQGVVATVEKIVPKGSIPPELVSIPGNR
VKAISIAEFGAHPQSLRVYNLSGIPAFAGLSTYLDDYEFQIEANEAANAPSRAEKWYADFVNLKGGHAEYLERIGISRLK
RLKQIPKENKVTKLEDPKTVNDSEQMIILAARAIQEYVKSNGYKTILAGIGAAHISAWTAARFLEKEGIEVKIITELGFF
SMKPHTGDVFLFSQLHAKDCTMLSDITSILGTVVPDHCLGVLGAAEVDWFGNINSTKTSKGKFLVGSGGANDIAAVADCI
VVAKANRGRFVKHVNYITSVGDRVMEAVCQFGRFQRTPNSDHVFEFSHWISPPSDEEMEPEEAVLRYTSWLPPDEDIPLK
HEPPVTAEELTVLRELDPEKIYIEQFMVYTRLP

Specific function: Unknown

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.8.3.5

Molecular weight: Translated: 65348; Mature: 65348

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNAKIFQNPDEMIRETVQPKMYLHLSATMSRPNALIYSLARCFQNSNPEFIISMAGIH
CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
SSAHALTISKVVKKMITGFAGDNYPKPAPNSLYSNLLEGKPFELELWSLLSIVQRLMAGA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
MRLPGFITNSLLGSDLILDKLGKTAFLLPDPKHQGINGSHSPNYKGKKGVDLVYILPLNP
HHCCHHHHHHHHCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DLTLLHAVVGDEEGNLVLCPPCGEGYWGALSAKQGVVATVEKIVPKGSIPPELVSIPGNR
CCEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEECCCCC
VKAISIAEFGAHPQSLRVYNLSGIPAFAGLSTYLDDYEFQIEANEAANAPSRAEKWYADF
EEEEEEHHHCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHH
VNLKGGHAEYLERIGISRLKRLKQIPKENKVTKLEDPKTVNDSEQMIILAARAIQEYVKS
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHC
NGYKTILAGIGAAHISAWTAARFLEKEGIEVKIITELGFFSMKPHTGDVFLFSQLHAKDC
CCCEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCEEEEEHHHHHHH
TMLSDITSILGTVVPDHCLGVLGAAEVDWFGNINSTKTSKGKFLVGSGGANDIAAVADCI
HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
VVAKANRGRFVKHVNYITSVGDRVMEAVCQFGRFQRTPNSDHVFEFSHWISPPSDEEMEP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCCCCCCCH
EEAVLRYTSWLPPDEDIPLKHEPPVTAEELTVLRELDPEKIYIEQFMVYTRLP
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKNAKIFQNPDEMIRETVQPKMYLHLSATMSRPNALIYSLARCFQNSNPEFIISMAGIH
CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
SSAHALTISKVVKKMITGFAGDNYPKPAPNSLYSNLLEGKPFELELWSLLSIVQRLMAGA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
MRLPGFITNSLLGSDLILDKLGKTAFLLPDPKHQGINGSHSPNYKGKKGVDLVYILPLNP
HHCCHHHHHHHHCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DLTLLHAVVGDEEGNLVLCPPCGEGYWGALSAKQGVVATVEKIVPKGSIPPELVSIPGNR
CCEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEECCCCC
VKAISIAEFGAHPQSLRVYNLSGIPAFAGLSTYLDDYEFQIEANEAANAPSRAEKWYADF
EEEEEEHHHCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHH
VNLKGGHAEYLERIGISRLKRLKQIPKENKVTKLEDPKTVNDSEQMIILAARAIQEYVKS
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHC
NGYKTILAGIGAAHISAWTAARFLEKEGIEVKIITELGFFSMKPHTGDVFLFSQLHAKDC
CCCEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCEEEEEHHHHHHH
TMLSDITSILGTVVPDHCLGVLGAAEVDWFGNINSTKTSKGKFLVGSGGANDIAAVADCI
HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
VVAKANRGRFVKHVNYITSVGDRVMEAVCQFGRFQRTPNSDHVFEFSHWISPPSDEEMEP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCCCCCCCH
EEAVLRYTSWLPPDEDIPLKHEPPVTAEELTVLRELDPEKIYIEQFMVYTRLP
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; 3-oxo acid

Specific reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxoacyl-CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA