| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45658132
Identifier: 45658132
GI number: 45658132
Start: 2755560
End: 2755832
Strand: Direct
Name: 45658132
Synonym: LIC12284
Alternate gene names: NA
Gene position: 2755560-2755832 (Clockwise)
Preceding gene: 45658131
Following gene: 45658134
Centisome position: 64.42
GC content: 36.26
Gene sequence:
>273_bases TTGATCAACCTATATGCAACGTTGCAAATCCAAAGATTCTGGATTTTAGACAAAATCAAATGGTGCTTTGCAGATTGTAA TCGAGAGCGCGACCTGTCGAACGTTTTTAAAAAAAGAATTTCACCTTTAAGAAGTTATTTGGTTCATCAACTCCAATTGT TCGACAGGGCACGCCCGGTTCTGATCCAATACTTCAAAAAATTTAATCTTCAAAACAAATCCACAAAAAAAGCCCTTCTT GCTTTTTGCAAAAAGGGCTTTGTAGCTTCATAA
Upstream 100 bases:
>100_bases AGAACCAAACTTTTAAAAACCACTCAATCAAACTAAAACGAAAAAAATATAGAACTTCAAAACGCGTGAGCGATCGAGAT GAAAATACTGCAATGCACCA
Downstream 100 bases:
>100_bases AATTCTAATTTAGAATTTTTTAATGAAATATTTTAAATATCAATCCACCTTGTTGGACAAAAAATTCAGCAAAAACTAAA CTTGTAATCGCCATCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MINLYATLQIQRFWILDKIKWCFADCNRERDLSNVFKKRISPLRSYLVHQLQLFDRARPVLIQYFKKFNLQNKSTKKALL AFCKKGFVAS
Sequences:
>Translated_90_residues MINLYATLQIQRFWILDKIKWCFADCNRERDLSNVFKKRISPLRSYLVHQLQLFDRARPVLIQYFKKFNLQNKSTKKALL AFCKKGFVAS >Mature_90_residues MINLYATLQIQRFWILDKIKWCFADCNRERDLSNVFKKRISPLRSYLVHQLQLFDRARPVLIQYFKKFNLQNKSTKKALL AFCKKGFVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10816; Mature: 10816
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLYATLQIQRFWILDKIKWCFADCNRERDLSNVFKKRISPLRSYLVHQLQLFDRARPV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LIQYFKKFNLQNKSTKKALLAFCKKGFVAS HHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINLYATLQIQRFWILDKIKWCFADCNRERDLSNVFKKRISPLRSYLVHQLQLFDRARPV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LIQYFKKFNLQNKSTKKALLAFCKKGFVAS HHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA