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The map label for this gene is 45658103

Identifier: 45658103

GI number: 45658103

Start: 2719647

End: 2721215

Strand: Reverse

Name: 45658103

Synonym: LIC12254

Alternate gene names: NA

Gene position: 2721215-2719647 (Counterclockwise)

Preceding gene: 45658105

Following gene: 45658102

Centisome position: 63.62

GC content: 39.96

Gene sequence:

>1569_bases
TTGGTTCTGAAATATAGAAACAGGAAATCCATGAAGAAATTTCTGATATTCGTAAGTTTTGTAATCAGTCTGTTTTTTGT
AACAACCGGAGCCGTCTATGGACAACAAGAAGATTGTTCTAAGTTGGCATTTATGGACGATGTCCAACGGAAACCAAGAA
CGGATTTACCCTTTCCCATCTCTGAAATGAGACGTCTGAGGCCAGAAGATATTTGTAAAAAGAAAGAAGGTTGGTTTCCC
ACCGGTCTTCCACTTTTGAATTCTGATCCGAACGTAGGTGTTGGATATGGGGTCCGGGTATTTTTGATCAACAACGGTAA
AAAGTCCGATCCGTTTTTTGAATATGCTCCGTATCGATTTAGAATGTTCGCTCAGTATTTTAATACGACTAAAAATAGAC
AGTATCAAGACATCAGTTTTGACGCTCCTTATATCTTTGATACCAAATGGAGACTAAGAGGAGATTTAATCTATGATACG
AATCCAAATACTTTATACTATGGAATAGGAGAGAGATCCTTAGAGACTCTTTCCTACCAAGAACGCAATCAATCGGGAGG
CGAAGTCGTAAGAAACGCGACTTACCACGAAAGAGAAAAGAATATTTATTTTACAAGACCTGGAGGTCCAGGGGATCCAG
TCGATTTTCAAGGAACCAATTACTCTGGTTTTCCAAATAATGACGCGTTTCGGGTAACGGATCGAATGTATAACCGCTAT
GACATTCGTTCCCCACAAGCTAATCTCAGTGGAGAGCATATCTTTTTCGGGGGATTAGTTAGGGCGGTCGCTGGAATCCG
AGTTTCTCAGAATATAATCAAAATCTTTGACGGTCAATTTGTAAAAAGTACGGATCCTTTGACAGAAGGAACGCCTTTTA
GTAATTCTGGTATAACTCCTAACGGAAAAACAAAAGTAACCGAAGATGCAGAAGCTGGAAAAATCATAGGGGCTAATGGC
GGTAATGTGAAGTCGGTTCGATTTGGATTGGTCTTAGATACTCGGGACTTGGAGCCAGATCCCAACCGAGGAATGTTTGT
GGAAGCGACTTATGAAAAAGTCGCCAAAGCTTTTGGATCTGATTTTCAGTATTCCAAATATTTTACTCAGGTCAAATTAT
TCTACAGCCCGTTTCCGAAGGTATTTGATAAACTAGTCATTGCAGGTAGAGGGGCGTTTGGTTTGACCGAAGGGGACGCA
CCTTTTTTCGAATATAGAAATTTATGGTCTACAGAAGGTGGAATTACTGGTCTCGGAGGATTAAGAACTCTGAGAGGTTA
TAAACAAGATCGATTTGCTGGTAAAGCAATGGGATGGGGAAATATAGAACTTCGTTGGAAGTTTTTCGATTTTAATATAG
CCGGACAACATTTTGCTCTGAACTTGGTGCCTTTTATGGATTTCGGTAGAGTTTGGGACGACGAACATAACGTGGGGCTT
AAGGATTATAAATATTCCCGAGGTTTAGGATTTAGAATCGCCTGGAATCAGAGTACAATTTTGATGTTGGACTACGCGGT
TTCCAAGGAAGACAAACAAGTATTTATGAACTTTAATCACATTTTCTGA

Upstream 100 bases:

>100_bases
ATATCATACCAAGTGTTATAAATAAAAGGATTTCGATCGAATCTATTTCTGAGATTCTTTGAAAAATCAAATTGACAGTA
TATGCTTGAACCTTTTCCGT

Downstream 100 bases:

>100_bases
GGGAATCATGAAAAAATATCAGTATATTCTAATATTCTATATCTTATTTTCTTTTTTTGTAAATTGCGAGGAGAAACCGG
ACGATACTACTTTAGGTTTT

Product: outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MVLKYRNRKSMKKFLIFVSFVISLFFVTTGAVYGQQEDCSKLAFMDDVQRKPRTDLPFPISEMRRLRPEDICKKKEGWFP
TGLPLLNSDPNVGVGYGVRVFLINNGKKSDPFFEYAPYRFRMFAQYFNTTKNRQYQDISFDAPYIFDTKWRLRGDLIYDT
NPNTLYYGIGERSLETLSYQERNQSGGEVVRNATYHEREKNIYFTRPGGPGDPVDFQGTNYSGFPNNDAFRVTDRMYNRY
DIRSPQANLSGEHIFFGGLVRAVAGIRVSQNIIKIFDGQFVKSTDPLTEGTPFSNSGITPNGKTKVTEDAEAGKIIGANG
GNVKSVRFGLVLDTRDLEPDPNRGMFVEATYEKVAKAFGSDFQYSKYFTQVKLFYSPFPKVFDKLVIAGRGAFGLTEGDA
PFFEYRNLWSTEGGITGLGGLRTLRGYKQDRFAGKAMGWGNIELRWKFFDFNIAGQHFALNLVPFMDFGRVWDDEHNVGL
KDYKYSRGLGFRIAWNQSTILMLDYAVSKEDKQVFMNFNHIF

Sequences:

>Translated_522_residues
MVLKYRNRKSMKKFLIFVSFVISLFFVTTGAVYGQQEDCSKLAFMDDVQRKPRTDLPFPISEMRRLRPEDICKKKEGWFP
TGLPLLNSDPNVGVGYGVRVFLINNGKKSDPFFEYAPYRFRMFAQYFNTTKNRQYQDISFDAPYIFDTKWRLRGDLIYDT
NPNTLYYGIGERSLETLSYQERNQSGGEVVRNATYHEREKNIYFTRPGGPGDPVDFQGTNYSGFPNNDAFRVTDRMYNRY
DIRSPQANLSGEHIFFGGLVRAVAGIRVSQNIIKIFDGQFVKSTDPLTEGTPFSNSGITPNGKTKVTEDAEAGKIIGANG
GNVKSVRFGLVLDTRDLEPDPNRGMFVEATYEKVAKAFGSDFQYSKYFTQVKLFYSPFPKVFDKLVIAGRGAFGLTEGDA
PFFEYRNLWSTEGGITGLGGLRTLRGYKQDRFAGKAMGWGNIELRWKFFDFNIAGQHFALNLVPFMDFGRVWDDEHNVGL
KDYKYSRGLGFRIAWNQSTILMLDYAVSKEDKQVFMNFNHIF
>Mature_522_residues
MVLKYRNRKSMKKFLIFVSFVISLFFVTTGAVYGQQEDCSKLAFMDDVQRKPRTDLPFPISEMRRLRPEDICKKKEGWFP
TGLPLLNSDPNVGVGYGVRVFLINNGKKSDPFFEYAPYRFRMFAQYFNTTKNRQYQDISFDAPYIFDTKWRLRGDLIYDT
NPNTLYYGIGERSLETLSYQERNQSGGEVVRNATYHEREKNIYFTRPGGPGDPVDFQGTNYSGFPNNDAFRVTDRMYNRY
DIRSPQANLSGEHIFFGGLVRAVAGIRVSQNIIKIFDGQFVKSTDPLTEGTPFSNSGITPNGKTKVTEDAEAGKIIGANG
GNVKSVRFGLVLDTRDLEPDPNRGMFVEATYEKVAKAFGSDFQYSKYFTQVKLFYSPFPKVFDKLVIAGRGAFGLTEGDA
PFFEYRNLWSTEGGITGLGGLRTLRGYKQDRFAGKAMGWGNIELRWKFFDFNIAGQHFALNLVPFMDFGRVWDDEHNVGL
KDYKYSRGLGFRIAWNQSTILMLDYAVSKEDKQVFMNFNHIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59809; Mature: 59809

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKYRNRKSMKKFLIFVSFVISLFFVTTGAVYGQQEDCSKLAFMDDVQRKPRTDLPFPI
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCH
SEMRRLRPEDICKKKEGWFPTGLPLLNSDPNVGVGYGVRVFLINNGKKSDPFFEYAPYRF
HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHH
RMFAQYFNTTKNRQYQDISFDAPYIFDTKWRLRGDLIYDTNPNTLYYGIGERSLETLSYQ
HHHHHHHCCCCCCCEEECCCCCCEEECCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHH
ERNQSGGEVVRNATYHEREKNIYFTRPGGPGDPVDFQGTNYSGFPNNDAFRVTDRMYNRY
HCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCEE
DIRSPQANLSGEHIFFGGLVRAVAGIRVSQNIIKIFDGQFVKSTDPLTEGTPFSNSGITP
ECCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
NGKTKVTEDAEAGKIIGANGGNVKSVRFGLVLDTRDLEPDPNRGMFVEATYEKVAKAFGS
CCCCEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCC
DFQYSKYFTQVKLFYSPFPKVFDKLVIAGRGAFGLTEGDAPFFEYRNLWSTEGGITGLGG
CCCHHHHHEEEHEECCCCHHHHHHHEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
LRTLRGYKQDRFAGKAMGWGNIELRWKFFDFNIAGQHFALNLVPFMDFGRVWDDEHNVGL
HHHHHCCHHHHCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCCCCC
KDYKYSRGLGFRIAWNQSTILMLDYAVSKEDKQVFMNFNHIF
CCEECCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCC
>Mature Secondary Structure
MVLKYRNRKSMKKFLIFVSFVISLFFVTTGAVYGQQEDCSKLAFMDDVQRKPRTDLPFPI
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCH
SEMRRLRPEDICKKKEGWFPTGLPLLNSDPNVGVGYGVRVFLINNGKKSDPFFEYAPYRF
HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHH
RMFAQYFNTTKNRQYQDISFDAPYIFDTKWRLRGDLIYDTNPNTLYYGIGERSLETLSYQ
HHHHHHHCCCCCCCEEECCCCCCEEECCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHH
ERNQSGGEVVRNATYHEREKNIYFTRPGGPGDPVDFQGTNYSGFPNNDAFRVTDRMYNRY
HCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCEE
DIRSPQANLSGEHIFFGGLVRAVAGIRVSQNIIKIFDGQFVKSTDPLTEGTPFSNSGITP
ECCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
NGKTKVTEDAEAGKIIGANGGNVKSVRFGLVLDTRDLEPDPNRGMFVEATYEKVAKAFGS
CCCCEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCC
DFQYSKYFTQVKLFYSPFPKVFDKLVIAGRGAFGLTEGDAPFFEYRNLWSTEGGITGLGG
CCCHHHHHEEEHEECCCCHHHHHHHEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
LRTLRGYKQDRFAGKAMGWGNIELRWKFFDFNIAGQHFALNLVPFMDFGRVWDDEHNVGL
HHHHHCCHHHHCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEECHHHCCCCCCCCCCCCC
KDYKYSRGLGFRIAWNQSTILMLDYAVSKEDKQVFMNFNHIF
CCEECCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA