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The map label for this gene is ctpA [H]

Identifier: 45658099

GI number: 45658099

Start: 2712909

End: 2714681

Strand: Direct

Name: ctpA [H]

Synonym: LIC12250

Alternate gene names: 45658099

Gene position: 2712909-2714681 (Clockwise)

Preceding gene: 45658097

Following gene: 45658100

Centisome position: 63.43

GC content: 39.26

Gene sequence:

>1773_bases
TTGGCCATTTTTATCCTATTCTGCGAGCCTACATCTGGTAAGTCTCCGGTCAAGGCAGACTTTACGCTCAAAGATTTTGA
TAACGTCGTAAGTCATGTTTCTCGTTACTATATCGACAAAAATATCGATAAAAACCGAGCTTACCGAGAAGCGGCAATCT
ATGCTCTTTTATCCCTTCCTCATTCTATTTATCTCTATCCGGAAAGTTATTTCAAGGAAAGAGATAAATATGAAGAAAAA
GACGAAATTTTTCCAGGTAAAACATTCAAAATTTCCACAGACGATTCCTTTATCCTTTTTGATCCGGATTATGCGGAAGT
AGAAAAGATACGAGATCGTAAACTCAAAGAAGACGCAAATAAATCCAAGGTAAGCGACGAAGAAGTTAAAAAGATCGTAG
AAAGAGAAAAGATCCGTAAGAACGTCCTCGCTTCTAAATGGGAACGAACCGGTTTTAATAAAAAAGATTTTGATAGAGTA
CTCGCATTTATAGAAACCAATTTAGATAAGTATAAGGACTCTCCTTTAAAAGATCCTTTTGGAGAATCTGAAGAAAAATC
CAAAGAACCATTTACAATGAACGACGTGATCCTTGCAGCAGCGAACGGTTATTTATCTTCTTTAGATCCACATAGTAACG
TTTTCTTAAGATCCGCTTGGGAAGAATCTATGGCCAAAATTCAAGACGGAAGTTTTGAAGGAATCGGTGCCATTCTTTCC
GGTGGAGGTAACAAAGAAGTTGTAGTGGAAAACCCATTGGAAGGAAGACCTGCGGTCAACGCCGGAATCCGTTCCGGAGA
CGTGATCCTTGCAGTTGATGGAAAATCAATCAAAGGAATTCTTTTAGACAAGGTAGTAGAAAAGATCAAAGGTAAAAAAG
GTTCTAAAGTAGCACTTACCATCCAGAGAAAAGGAGTTCCAGGAACCTTACACATTGAAGTAGTTAGAGATACAATTGAA
ATCAAAAACCTAAGTAGTAAACTCATCGAGGGTCATGAACATATTGGTTATATCAAACTCACCGGTTTTGTGAAGTCGGA
AGAAGGCCCTTCCGTAGACAGAGAAATCATAGAAAAATACAAAGAACTAGATAAAGAAGCCCAAGCGAAAGGCACCAGAC
TCAAAGCGTTGATCTTAGATCTAAGAAATAACGCTGGTGGTTACTTAGACCTTGCAATCGACATTGCAGATATGTTTATC
GAAAAGGGTCTGATCGTTTCCACCAAAAGTCCGAATCGTAGCCCCGAAGACGCTTACGCAAAAAACAAGGACATCACCAA
TTTACCGTTAGCCGTTCTGATCAACGCTAAATCCGCTTCCGCTTCTGAAATCGTAGCCAGCGCGATCAAACACCATGGAA
GAGGAATTTTATTAGGAGAAAGAACTTTCGGAAAGGCTACTGTGCAAAAGTTAATGCCTTTAGGAAATGACTATTTGATC
AAACTTACACAAGCTCGTTACTATTCTCCTTCTGGAAACACGATTCAAGTTGTGGGAGTAAAACCAGACATTGACATTTC
TTCCGAAGAAGACGGTTCGTTTCCATTTCGATTTAGAGAAGAAAACATGTGGAATCATCTTTCCGAACTTCCTCCAGAGG
CTGAAGAAAAAAGTTCTTTCGACGTGAAGAAATTAGAAGCCTGGGTTCAAAAGAACGGTAAGGCGTCCGATTTCATTGCG
TCTCATAAAAACGATCCTATCAAGCCGGACTACCAATTGATCCGTTCCTTGGATTATATAGAAGCCTTACTCTCTACACA
AAAAAAGAAATAA

Upstream 100 bases:

>100_bases
ACACTTTGAGATTTCAATAGAGAATGAACTGAAAATTTTCTGAAAGGACATGAGTTTGAAAAAAGGATCTACCGCATTTT
CGTTGTTACTTTCCACTCTT

Downstream 100 bases:

>100_bases
AATGCCCCGTATCAAAACGGACTTTTTAGTCCTAGGGAGCGGAATTACAGGTCTTTTTGCGGCCTTAAAACTCGCTCCCT
ACGGCTCCGTAATCATAATC

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MAIFILFCEPTSGKSPVKADFTLKDFDNVVSHVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYLYPESYFKERDKYEEK
DEIFPGKTFKISTDDSFILFDPDYAEVEKIRDRKLKEDANKSKVSDEEVKKIVEREKIRKNVLASKWERTGFNKKDFDRV
LAFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVILAAANGYLSSLDPHSNVFLRSAWEESMAKIQDGSFEGIGAILS
GGGNKEVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKGVPGTLHIEVVRDTIE
IKNLSSKLIEGHEHIGYIKLTGFVKSEEGPSVDREIIEKYKELDKEAQAKGTRLKALILDLRNNAGGYLDLAIDIADMFI
EKGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGILLGERTFGKATVQKLMPLGNDYLI
KLTQARYYSPSGNTIQVVGVKPDIDISSEEDGSFPFRFREENMWNHLSELPPEAEEKSSFDVKKLEAWVQKNGKASDFIA
SHKNDPIKPDYQLIRSLDYIEALLSTQKKK

Sequences:

>Translated_590_residues
MAIFILFCEPTSGKSPVKADFTLKDFDNVVSHVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYLYPESYFKERDKYEEK
DEIFPGKTFKISTDDSFILFDPDYAEVEKIRDRKLKEDANKSKVSDEEVKKIVEREKIRKNVLASKWERTGFNKKDFDRV
LAFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVILAAANGYLSSLDPHSNVFLRSAWEESMAKIQDGSFEGIGAILS
GGGNKEVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKGVPGTLHIEVVRDTIE
IKNLSSKLIEGHEHIGYIKLTGFVKSEEGPSVDREIIEKYKELDKEAQAKGTRLKALILDLRNNAGGYLDLAIDIADMFI
EKGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGILLGERTFGKATVQKLMPLGNDYLI
KLTQARYYSPSGNTIQVVGVKPDIDISSEEDGSFPFRFREENMWNHLSELPPEAEEKSSFDVKKLEAWVQKNGKASDFIA
SHKNDPIKPDYQLIRSLDYIEALLSTQKKK
>Mature_589_residues
AIFILFCEPTSGKSPVKADFTLKDFDNVVSHVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYLYPESYFKERDKYEEKD
EIFPGKTFKISTDDSFILFDPDYAEVEKIRDRKLKEDANKSKVSDEEVKKIVEREKIRKNVLASKWERTGFNKKDFDRVL
AFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVILAAANGYLSSLDPHSNVFLRSAWEESMAKIQDGSFEGIGAILSG
GGNKEVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKGVPGTLHIEVVRDTIEI
KNLSSKLIEGHEHIGYIKLTGFVKSEEGPSVDREIIEKYKELDKEAQAKGTRLKALILDLRNNAGGYLDLAIDIADMFIE
KGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGILLGERTFGKATVQKLMPLGNDYLIK
LTQARYYSPSGNTIQVVGVKPDIDISSEEDGSFPFRFREENMWNHLSELPPEAEEKSSFDVKKLEAWVQKNGKASDFIAS
HKNDPIKPDYQLIRSLDYIEALLSTQKKK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=332, Percent_Identity=32.2289156626506, Blast_Score=129, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 66193; Mature: 66062

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFILFCEPTSGKSPVKADFTLKDFDNVVSHVSRYYIDKNIDKNRAYREAAIYALLSLP
CEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
HSIYLYPESYFKERDKYEEKDEIFPGKTFKISTDDSFILFDPDYAEVEKIRDRKLKEDAN
CEEEECCHHHHHHHHCCCCHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC
KSKVSDEEVKKIVEREKIRKNVLASKWERTGFNKKDFDRVLAFIETNLDKYKDSPLKDPF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
GESEEKSKEPFTMNDVILAAANGYLSSLDPHSNVFLRSAWEESMAKIQDGSFEGIGAILS
CCCHHHCCCCCCHHHEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCC
GGGNKEVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALT
CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE
IQRKGVPGTLHIEVVRDTIEIKNLSSKLIEGHEHIGYIKLTGFVKSEEGPSVDREIIEKY
EEECCCCCEEEEEEEEHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCHHHHHHH
KELDKEAQAKGTRLKALILDLRNNAGGYLDLAIDIADMFIEKGLIVSTKSPNRSPEDAYA
HHHHHHHHHCCCEEEEEEEEHHCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCCCCHHHH
KNKDITNLPLAVLINAKSASASEIVASAIKHHGRGILLGERTFGKATVQKLMPLGNDYLI
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEEE
KLTQARYYSPSGNTIQVVGVKPDIDISSEEDGSFPFRFREENMWNHLSELPPEAEEKSSF
EEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCC
DVKKLEAWVQKNGKASDFIASHKNDPIKPDYQLIRSLDYIEALLSTQKKK
CHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIFILFCEPTSGKSPVKADFTLKDFDNVVSHVSRYYIDKNIDKNRAYREAAIYALLSLP
EEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
HSIYLYPESYFKERDKYEEKDEIFPGKTFKISTDDSFILFDPDYAEVEKIRDRKLKEDAN
CEEEECCHHHHHHHHCCCCHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC
KSKVSDEEVKKIVEREKIRKNVLASKWERTGFNKKDFDRVLAFIETNLDKYKDSPLKDPF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
GESEEKSKEPFTMNDVILAAANGYLSSLDPHSNVFLRSAWEESMAKIQDGSFEGIGAILS
CCCHHHCCCCCCHHHEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCC
GGGNKEVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALT
CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE
IQRKGVPGTLHIEVVRDTIEIKNLSSKLIEGHEHIGYIKLTGFVKSEEGPSVDREIIEKY
EEECCCCCEEEEEEEEHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCHHHHHHH
KELDKEAQAKGTRLKALILDLRNNAGGYLDLAIDIADMFIEKGLIVSTKSPNRSPEDAYA
HHHHHHHHHCCCEEEEEEEEHHCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCCCCHHHH
KNKDITNLPLAVLINAKSASASEIVASAIKHHGRGILLGERTFGKATVQKLMPLGNDYLI
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEEE
KLTQARYYSPSGNTIQVVGVKPDIDISSEEDGSFPFRFREENMWNHLSELPPEAEEKSSF
EEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCC
DVKKLEAWVQKNGKASDFIASHKNDPIKPDYQLIRSLDYIEALLSTQKKK
CHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]