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The map label for this gene is ycgL [H]

Identifier: 45658062

GI number: 45658062

Start: 2670779

End: 2671555

Strand: Reverse

Name: ycgL [H]

Synonym: LIC12213

Alternate gene names: 45658062

Gene position: 2671555-2670779 (Counterclockwise)

Preceding gene: 45658063

Following gene: 45658055

Centisome position: 62.46

GC content: 36.29

Gene sequence:

>777_bases
ATGATTTTACCGGAGATTAAAAAGAAAATTCAAGATAGACTTGTCGAGATTGAGTCTGAGTTCAACGTCGAAATTCTTTT
GGCCATTGAATCAGGTTCAAGAGCTTGGGGGTTTGAGTCGATTGATAGCGATTACGACATTCGTTTTATTTATAAACATA
AAACCGAATGGTATCTAAGTGTACTTCCGGGAAGGGAAGTGATCGAAATTCCTATTGTCGATTTGATGGACTGTAGCGGA
TGGGATTTGCGAAAATCTTTTTTTCTAATGAATAAGTCCAACCCGGTTTTATTCGAATGGCTCCGATCTCCGATCGTTTA
CAAAAAGAACGACACTTTTTACGAAATCTTTTTCGATATTTCAAAGGAATATTTTTCTCCGATTGGAACTGTTTATCATT
ATTTACATATGGCTACTGGGAATTTTAAAGAGTATCTGAAACAGGAACATGTGCGTGTAAAAAAATATTTTTACGTGCTC
AGACCTTTGTTAGCCTGTGCGTGGGTGGAACAAAAGAAAAGTTCTCCACCGATGGAGTTTCAAGTGCTTTTAGATTCGGT
TCTAAGTGATTCTATCGTTCGCAGGGAAATCGATTTACTTTTGAGTAAAAAAAGAAGTGGAACCGAATTGGGTGAAGGAA
ATCGAATAGACATCTTAAACGAATTTATTGAAACTCAGATTCGACATTTTGAAATGGTTGTTTCCGGTTTTGATCCCGCT
CATAAACCCGATCCCAAAAAAATGGATTTAGGATTTCAGAAAATTCTAAACTTATAA

Upstream 100 bases:

>100_bases
GACAATCGAGAAGTATTTTATCAGTTTGAGAAAATACTTGAACGCTTTTCTATATAGGTACATTCTCGATTTTTCCATTA
CTCTTGATTAAGTTTAAAGA

Downstream 100 bases:

>100_bases
TCGTAATAACCATTTTGGTTTGGCTAACAAGTAACTAGGAATGTGTTTTATCATAAAAAGCAAATCCTACCGCGGCCAGG
ATTAAAAGAAAACTTACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MILPEIKKKIQDRLVEIESEFNVEILLAIESGSRAWGFESIDSDYDIRFIYKHKTEWYLSVLPGREVIEIPIVDLMDCSG
WDLRKSFFLMNKSNPVLFEWLRSPIVYKKNDTFYEIFFDISKEYFSPIGTVYHYLHMATGNFKEYLKQEHVRVKKYFYVL
RPLLACAWVEQKKSSPPMEFQVLLDSVLSDSIVRREIDLLLSKKRSGTELGEGNRIDILNEFIETQIRHFEMVVSGFDPA
HKPDPKKMDLGFQKILNL

Sequences:

>Translated_258_residues
MILPEIKKKIQDRLVEIESEFNVEILLAIESGSRAWGFESIDSDYDIRFIYKHKTEWYLSVLPGREVIEIPIVDLMDCSG
WDLRKSFFLMNKSNPVLFEWLRSPIVYKKNDTFYEIFFDISKEYFSPIGTVYHYLHMATGNFKEYLKQEHVRVKKYFYVL
RPLLACAWVEQKKSSPPMEFQVLLDSVLSDSIVRREIDLLLSKKRSGTELGEGNRIDILNEFIETQIRHFEMVVSGFDPA
HKPDPKKMDLGFQKILNL
>Mature_258_residues
MILPEIKKKIQDRLVEIESEFNVEILLAIESGSRAWGFESIDSDYDIRFIYKHKTEWYLSVLPGREVIEIPIVDLMDCSG
WDLRKSFFLMNKSNPVLFEWLRSPIVYKKNDTFYEIFFDISKEYFSPIGTVYHYLHMATGNFKEYLKQEHVRVKKYFYVL
RPLLACAWVEQKKSSPPMEFQVLLDSVLSDSIVRREIDLLLSKKRSGTELGEGNRIDILNEFIETQIRHFEMVVSGFDPA
HKPDPKKMDLGFQKILNL

Specific function: Unknown

COG id: COG3541

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018775 [H]

Pfam domain/function: PF10127 Nuc-transf [H]

EC number: NA

Molecular weight: Translated: 30448; Mature: 30448

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPEIKKKIQDRLVEIESEFNVEILLAIESGSRAWGFESIDSDYDIRFIYKHKTEWYLS
CCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEE
VLPGREVIEIPIVDLMDCSGWDLRKSFFLMNKSNPVLFEWLRSPIVYKKNDTFYEIFFDI
ECCCCEEEEECCEEEECCCCCCHHHEEEEECCCCCHHHHHHHCCEEEECCCCEEEHHHHH
SKEYFSPIGTVYHYLHMATGNFKEYLKQEHVRVKKYFYVLRPLLACAWVEQKKSSPPMEF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QVLLDSVLSDSIVRREIDLLLSKKRSGTELGEGNRIDILNEFIETQIRHFEMVVSGFDPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
HKPDPKKMDLGFQKILNL
CCCCCCHHCCCHHHHHCC
>Mature Secondary Structure
MILPEIKKKIQDRLVEIESEFNVEILLAIESGSRAWGFESIDSDYDIRFIYKHKTEWYLS
CCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEE
VLPGREVIEIPIVDLMDCSGWDLRKSFFLMNKSNPVLFEWLRSPIVYKKNDTFYEIFFDI
ECCCCEEEEECCEEEECCCCCCHHHEEEEECCCCCHHHHHHHCCEEEECCCCEEEHHHHH
SKEYFSPIGTVYHYLHMATGNFKEYLKQEHVRVKKYFYVLRPLLACAWVEQKKSSPPMEF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QVLLDSVLSDSIVRREIDLLLSKKRSGTELGEGNRIDILNEFIETQIRHFEMVVSGFDPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
HKPDPKKMDLGFQKILNL
CCCCCCHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]