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The map label for this gene is 45658057

Identifier: 45658057

GI number: 45658057

Start: 2663730

End: 2665154

Strand: Direct

Name: 45658057

Synonym: LIC12208

Alternate gene names: NA

Gene position: 2663730-2665154 (Clockwise)

Preceding gene: 45658056

Following gene: 45658058

Centisome position: 62.28

GC content: 38.32

Gene sequence:

>1425_bases
ATGAAATACCTTTACATCCTTTTGTTTATATTCATTCAGGCGTGTGTACCTGCTAAAATACTCAACGTGTCCGCCCCCGG
ACCAAACGATCTTTGGATACAACTACTCATCCGAGAGAAAATCAAAGAAATCATGAATAACGAAAACTTATTCGATACAA
TAACCTATGAAGATTCTAATAATTTAATATTAAAAAAAACTTTACTACTTGGAACGCCTAACGCAGAAACTATTGGTAAA
AATTTAACTATAGACGAAAAAAGTTTCATATATATTGCAGGAGAAACAACCGGTGGGATTTACAATGCTACATCCGTTGG
AACTCGAGATTTAATTTTCGGAAGATATGATTCTCAAATGAACCCAATTGTAAATGGTACTCGCCAAATTGGAGGTGCAG
GAATAAGCTTAAACGTACAAGACATTGCAGTCGACTCGAACGGAAACACGTATATCACCGGCAATACGAACCATCACTTC
AGAGGCGCTCAACTTTTTGGAACGACTGATATGTTTCTAATTAAATTAGATCCGAATGGAAATGAACTTTGGGGGATACA
AATAGGGATTGCCAATACTTCAATTTCTCCTGCAAAGATCACGTTAGACTCGCTTGAAAACGTTTACATAACTGGAAGAT
CAACCGGACCTTTCGGAGGTTTTCTAAATGGGGCCAACGGATTTATCGCCAAATTTAATAGTATTAACGGAAATGAAGAA
TGGGTCCAACAAATCGCATTTCCACAAGCACAAAGTTTTCCAACTGGACTCACTTTCGACAAAACGACAAATACAATTTA
TGTAGCCGGAGTCACTAATGCGGACTATAAAAATAACAAAAGACCAGCAATCGGAAACCAAGACATTTTTATTTTCAAAT
ATGATTCTCAAGGGAATCGTCAATTTTTTGCGCAACTCGGTGCTATCTCTAAATCCTTAGATAGCGCATCCATAACTGTA
GATTTATCCGGAAATGTTTTTGTAGGTGGAACGAGTAACGGTCGTTTTGAAGATAAATTAACCGGAACGAGCTGGCTTGG
AACCATAGCAAAATATGATTCATCCGGCGTCTTACAATGGGTTCGACAATTCGGTCCCGATAGCGCTCCTCCAAAACAAG
CAGTGATCCGTTCTATCATAACCGATATGCATGGAAATGTTTTTACTACAGGCCATACAAATGGAAATATATTAGATGGA
GGAGATGATTCTTTAGGAGTTCAAGACGCATTTATTACAAAACACAATTCATCTGGGCAAATTCAACGGATACAACAAGT
TGGTACCCCTGGTGCAACCATTTCGGGAAATGGACTCGGACTTGATCCACAGGGAAATCTCTACGTTATCGGAAATACAA
ACAGTGGAATCAACGAAGCTCCAATCAGTGGAACGAACGATATGTTCCTTTTAAAATATAGATAA

Upstream 100 bases:

>100_bases
CTTTTTTATAGAAGTAGGGTAAACCATCCTACTTTGATTTAAATTTCTATTCTAAAAATAGCTATATAGTTTATGTCGCA
TATAAATTCGAAAAAATACT

Downstream 100 bases:

>100_bases
CTATTTTTAGAAGTTTCTCACAAGGAGTTACTTTTAAATCCAGCTTTTCGATCTAAAGTAGATTTGTTTTGAAACATTTT
CAATATTACATAACATAAAT

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKYLYILLFIFIQACVPAKILNVSAPGPNDLWIQLLIREKIKEIMNNENLFDTITYEDSNNLILKKTLLLGTPNAETIGK
NLTIDEKSFIYIAGETTGGIYNATSVGTRDLIFGRYDSQMNPIVNGTRQIGGAGISLNVQDIAVDSNGNTYITGNTNHHF
RGAQLFGTTDMFLIKLDPNGNELWGIQIGIANTSISPAKITLDSLENVYITGRSTGPFGGFLNGANGFIAKFNSINGNEE
WVQQIAFPQAQSFPTGLTFDKTTNTIYVAGVTNADYKNNKRPAIGNQDIFIFKYDSQGNRQFFAQLGAISKSLDSASITV
DLSGNVFVGGTSNGRFEDKLTGTSWLGTIAKYDSSGVLQWVRQFGPDSAPPKQAVIRSIITDMHGNVFTTGHTNGNILDG
GDDSLGVQDAFITKHNSSGQIQRIQQVGTPGATISGNGLGLDPQGNLYVIGNTNSGINEAPISGTNDMFLLKYR

Sequences:

>Translated_474_residues
MKYLYILLFIFIQACVPAKILNVSAPGPNDLWIQLLIREKIKEIMNNENLFDTITYEDSNNLILKKTLLLGTPNAETIGK
NLTIDEKSFIYIAGETTGGIYNATSVGTRDLIFGRYDSQMNPIVNGTRQIGGAGISLNVQDIAVDSNGNTYITGNTNHHF
RGAQLFGTTDMFLIKLDPNGNELWGIQIGIANTSISPAKITLDSLENVYITGRSTGPFGGFLNGANGFIAKFNSINGNEE
WVQQIAFPQAQSFPTGLTFDKTTNTIYVAGVTNADYKNNKRPAIGNQDIFIFKYDSQGNRQFFAQLGAISKSLDSASITV
DLSGNVFVGGTSNGRFEDKLTGTSWLGTIAKYDSSGVLQWVRQFGPDSAPPKQAVIRSIITDMHGNVFTTGHTNGNILDG
GDDSLGVQDAFITKHNSSGQIQRIQQVGTPGATISGNGLGLDPQGNLYVIGNTNSGINEAPISGTNDMFLLKYR
>Mature_474_residues
MKYLYILLFIFIQACVPAKILNVSAPGPNDLWIQLLIREKIKEIMNNENLFDTITYEDSNNLILKKTLLLGTPNAETIGK
NLTIDEKSFIYIAGETTGGIYNATSVGTRDLIFGRYDSQMNPIVNGTRQIGGAGISLNVQDIAVDSNGNTYITGNTNHHF
RGAQLFGTTDMFLIKLDPNGNELWGIQIGIANTSISPAKITLDSLENVYITGRSTGPFGGFLNGANGFIAKFNSINGNEE
WVQQIAFPQAQSFPTGLTFDKTTNTIYVAGVTNADYKNNKRPAIGNQDIFIFKYDSQGNRQFFAQLGAISKSLDSASITV
DLSGNVFVGGTSNGRFEDKLTGTSWLGTIAKYDSSGVLQWVRQFGPDSAPPKQAVIRSIITDMHGNVFTTGHTNGNILDG
GDDSLGVQDAFITKHNSSGQIQRIQQVGTPGATISGNGLGLDPQGNLYVIGNTNSGINEAPISGTNDMFLLKYR

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51259; Mature: 51259

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLYILLFIFIQACVPAKILNVSAPGPNDLWIQLLIREKIKEIMNNENLFDTITYEDSN
CHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
NLILKKTLLLGTPNAETIGKNLTIDEKSFIYIAGETTGGIYNATSVGTRDLIFGRYDSQM
CEEEEEEEEEECCCHHHCCCCCEECCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCC
NPIVNGTRQIGGAGISLNVQDIAVDSNGNTYITGNTNHHFRGAQLFGTTDMFLIKLDPNG
CCHHCCCHHCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCEEEEEEECCCC
NELWGIQIGIANTSISPAKITLDSLENVYITGRSTGPFGGFLNGANGFIAKFNSINGNEE
CEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
WVQQIAFPQAQSFPTGLTFDKTTNTIYVAGVTNADYKNNKRPAIGNQDIFIFKYDSQGNR
HHHHHCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCH
QFFAQLGAISKSLDSASITVDLSGNVFVGGTSNGRFEDKLTGTSWLGTIAKYDSSGVLQW
HHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHCCCCHHHHH
VRQFGPDSAPPKQAVIRSIITDMHGNVFTTGHTNGNILDGGDDSLGVQDAFITKHNSSGQ
HHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCEEEEEEECCCCCH
IQRIQQVGTPGATISGNGLGLDPQGNLYVIGNTNSGINEAPISGTNDMFLLKYR
HHHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKYLYILLFIFIQACVPAKILNVSAPGPNDLWIQLLIREKIKEIMNNENLFDTITYEDSN
CHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
NLILKKTLLLGTPNAETIGKNLTIDEKSFIYIAGETTGGIYNATSVGTRDLIFGRYDSQM
CEEEEEEEEEECCCHHHCCCCCEECCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCC
NPIVNGTRQIGGAGISLNVQDIAVDSNGNTYITGNTNHHFRGAQLFGTTDMFLIKLDPNG
CCHHCCCHHCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCEEEEEEECCCC
NELWGIQIGIANTSISPAKITLDSLENVYITGRSTGPFGGFLNGANGFIAKFNSINGNEE
CEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
WVQQIAFPQAQSFPTGLTFDKTTNTIYVAGVTNADYKNNKRPAIGNQDIFIFKYDSQGNR
HHHHHCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCH
QFFAQLGAISKSLDSASITVDLSGNVFVGGTSNGRFEDKLTGTSWLGTIAKYDSSGVLQW
HHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHCCCCHHHHH
VRQFGPDSAPPKQAVIRSIITDMHGNVFTTGHTNGNILDGGDDSLGVQDAFITKHNSSGQ
HHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCEEEEEEECCCCCH
IQRIQQVGTPGATISGNGLGLDPQGNLYVIGNTNSGINEAPISGTNDMFLLKYR
HHHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA