Click here to switch to the map view.

The map label for this gene is 45658056

Identifier: 45658056

GI number: 45658056

Start: 2662267

End: 2662839

Strand: Direct

Name: 45658056

Synonym: LIC12207

Alternate gene names: NA

Gene position: 2662267-2662839 (Clockwise)

Preceding gene: 45657968

Following gene: 45658057

Centisome position: 62.24

GC content: 30.54

Gene sequence:

>573_bases
ATGACAGACTCTGTTCTTATCCAAAAATTGAACGCAAGACTTATCGATGAAGGTATTCTCGATAGAACTTTCGAAGAAAA
TTATTCAATTGTTTACCAAAAACTCAATGAAGAGATTTTTAAAATCGAAAATCCCTCTCTACCGGAAATCAATTTCGAAT
TGGGAGAAAAATTTCTCAAGAACTGGTTGACTGGACTCTCTCATCAAGGGATCTCTCAAGATAAACTAACCAATTATCTA
CGTTGTGGTCTTGCTCATCTTTCTTATGAATATATCAAATCGAATGACCAAGAAATAGAAATCGACGATAAGATAGAATC
TACAATTGTTTTCTTTAAGAATCGCAATTTTGAAAAATCTTTCTTTCGTTCAAACGACAAAGAAAAAATGGCTGCTCCAA
AATCAATTCCCACCCAAAAAGCTGCTGGGAAAAAAACTATTCCTAAAAAGAAAGCTATTAAAAAGAAAAAACTAATAAAG
AAAAAGATTTCTAAGAAAAAAGCTTCGAAAAAAATACAAAAGAAAAAAACGGTTAAGAAAAAGATTCTGAAGAAAAAAAC
GAAAAGAAAATAA

Upstream 100 bases:

>100_bases
CCTCTAAACCCTTTCTATTTTTTAGTTTTTTCTTGCAGAAAGAATTCTCCCAACAAACTATATCCATTTCTATTTTATAA
TTTCAGGAGATTCTAACAAT

Downstream 100 bases:

>100_bases
ACCTTTCACCGAAATTTAATTTTCTTATTTTAAAAATCTTGGAGCTGAGTGCTCCAAGAAAATAGGATTCTTTTTATCTT
AGAGTTAAAAATACAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTDSVLIQKLNARLIDEGILDRTFEENYSIVYQKLNEEIFKIENPSLPEINFELGEKFLKNWLTGLSHQGISQDKLTNYL
RCGLAHLSYEYIKSNDQEIEIDDKIESTIVFFKNRNFEKSFFRSNDKEKMAAPKSIPTQKAAGKKTIPKKKAIKKKKLIK
KKISKKKASKKIQKKKTVKKKILKKKTKRK

Sequences:

>Translated_190_residues
MTDSVLIQKLNARLIDEGILDRTFEENYSIVYQKLNEEIFKIENPSLPEINFELGEKFLKNWLTGLSHQGISQDKLTNYL
RCGLAHLSYEYIKSNDQEIEIDDKIESTIVFFKNRNFEKSFFRSNDKEKMAAPKSIPTQKAAGKKTIPKKKAIKKKKLIK
KKISKKKASKKIQKKKTVKKKILKKKTKRK
>Mature_189_residues
TDSVLIQKLNARLIDEGILDRTFEENYSIVYQKLNEEIFKIENPSLPEINFELGEKFLKNWLTGLSHQGISQDKLTNYLR
CGLAHLSYEYIKSNDQEIEIDDKIESTIVFFKNRNFEKSFFRSNDKEKMAAPKSIPTQKAAGKKTIPKKKAIKKKKLIKK
KISKKKASKKIQKKKTVKKKILKKKTKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22223; Mature: 22092

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSVLIQKLNARLIDEGILDRTFEENYSIVYQKLNEEIFKIENPSLPEINFELGEKFLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
NWLTGLSHQGISQDKLTNYLRCGLAHLSYEYIKSNDQEIEIDDKIESTIVFFKNRNFEKS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHEEEECCCCCHHH
FFRSNDKEKMAAPKSIPTQKAAGKKTIPKKKAIKKKKLIKKKISKKKASKKIQKKKTVKK
HHCCCCHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILKKKTKRK
HHHHHHHCCC
>Mature Secondary Structure 
TDSVLIQKLNARLIDEGILDRTFEENYSIVYQKLNEEIFKIENPSLPEINFELGEKFLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
NWLTGLSHQGISQDKLTNYLRCGLAHLSYEYIKSNDQEIEIDDKIESTIVFFKNRNFEKS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHEEEECCCCCHHH
FFRSNDKEKMAAPKSIPTQKAAGKKTIPKKKAIKKKKLIKKKISKKKASKKIQKKKTVKK
HHCCCCHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILKKKTKRK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA